CBS51388_006261-T1, CBS51388_006261-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_006261-T1
Unique Name	CBS51388_006261-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An09:1115625..1117320-
coding sequence from alignment at An09:1115625..1117320-

mRNA from alignment at An09:1115625..1117320-

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_006261-T1 ID=CBS51388_006261-T1|Name=CBS51388_006261-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1696bp|location=Sequence derived from alignment at An09:1115625..1117320- (Aspergillus niger CBS 513.88)
ATGAGTGGTCTCGATCTAGAAAAGAAGTTGAGCGTTAACCAGGCCTCAAC
CGGCGAGAATGCGTCTGGATCTGAAGATGCAGATGCGCTTAAGCTGGCTG
AGATGGGTTACACGCAGGACCTGCAGCGCAATTTCTCCCTGCTATCCCTG
GTCGGCATTGCGTTTTGTATGTCAAACTCTTGGTTCGGTATCTCAGCATC
CTTGATCACCGGTATCAGCTCTGGAGGTACCGTCCTCATCGTTTACGGCT
TGCTCTGGATCACCTTTATCTCGACTTGTGTCGCTGCCTCCCTCTCGGAA
CTGGCTAGCTCCATGCCCAATGCCGGTGGGCAATACTTCTGGGCGAACGA
GCTTGCTCCGAAGAAATATGCCCGGTTCTTCTCCTATCTTACCGGTTGGT
TCGGATACGCTGGTGCCATTTTCGCGAGTGCCAGTGTTGCTCTCAGTCTT
GGATCCGGTGTTGTGGGAATGTGGCAACTTGGCCATCCGTCATTGTATGC
TTCCAAAATCCCAGATCTGTTCCCTGAGAGGAAATGTCTTCCGCTCTAGG
TCCGTAGTGCTGACTCCAATCACAGTGTTCCCAAAGCCTGGCATACTGTA
GTAGCATACCAGCTCATCAACTTCTTCTGCTACCTCTTCAACTGTTGGGG
CAAAACCCTGCCTGCTGTGGCAAAAGCAACGCTGTACATCTCGTTGCTTT
CTTTCCTGGTCATCCTTATTGTTGTCCCGGCTTGCGCCAACCCGCATGCC
AATGGATCCTATGTTTTCGGGCATTTCGTCAACTCCACTGGCTGGAAATC
AGATGGAATCGCTTTCATTGTCGGCTTGATCAACCCGAACTGGATCTTTG
CCTGCTTGGATTCGGCCACTCATCTTGCCGAAGAGGTGCCGCAGCCCGAG
AAGAACATTCCTGTTGCGATCATGGCCACCGTCGGCATTGGTTTCGTTAC
CTCATGGACCTACTGTATTGCGATGTTTTTCAGTCTCCAAGACCTTGATG
CACTTTTGAACACCGCCACAGGAGTGCCCATCCTGGAACTTTACTACCAG
GCTCTGAAGAACAGGGCAGGTGCAATTGTTCTGGAAACCCTCCTAGTAGT
GACGGGTATGGGTTGCTTGATTGCCTGCCACACTTGGCAGTCACGTCTTG
CCTGGGCCTTCGCTCGTGATCGCGGTATGCCTGGACATCAACTGCTCTCC
AAGGTCAACATGACCTTGGATGTCCCCTTACATGCCCACAACGCCAGCGC
ATTCATTGTTGCTGTTCTCGGCCTGCTCTACTTGGGATCCTCTACCGCTT
TCAACAGCATGGTCACGGCGTGCATCTCGCTTCTGTACATTTCGTACTCT
ATCCCCGTTATCTGCCTTTTGTATGTTGGTCGCGACAACATCAAGCACGG
TCCATTCTGGCTGGGCAAGTGGGGTCTTGCTGCGAACATTGTCACCCTGG
CATGGACTCTTTTCTGTCTCGTTATGTACTCATTCCCTGCGACTATGCCA
GTCACAACAGGAAGTAAGTATTCATGTCAACCAATCATATACGATGAATG
AAGTGACTAACAAGACTGCAGATATGAACTATGTTTCGGCCGTTTATGGC
GTCGTTGTCTTCATTGTTCTGTGTGACTGGTTTGCACGAGGAAGACGTTC
ATTCCGAGGCAGCCAGAGTTGTGTGGAAGGAGAAAGTGCCGAGTAA

Coding sequence (CDS) from alignment at An09:1115625..1117320-

>CBS51388_006261-T1 ID=CBS51388_006261-T1|Name=CBS51388_006261-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4671bp|location=Sequence derived from alignment at An09:1115625..1117320- (Aspergillus niger CBS 513.88)
ATATGAACTATGTTTCGGCCGTTTATGGCGTCGTTGTCTTCATTGTTCTG
TGTGACTGGTTTGCACGAGGAAGACGTTCATTCCGAGGCAGCCAGAGTTG
TGTGGAAGGAGAAAGTGCCGAGTAATGTTCCCAAAGCCTGGCATACTGTA
GTAGCATACCAGCTCATCAACTTCTTCTGCTACCTCTTCAACTGTTGGGG
CAAAACCCTGCCTGCTGTGGCAAAAGCAACGCTGTACATCTCGTTGCTTT
CTTTCCTGGTCATCCTTATTGTTGTCCCGGCTTGCGCCAACCCGCATGCC
AATGGATCCTATGTTTTCGGGCATTTCGTCAACTCCACTGGCTGGAAATC
AGATGGAATCGCTTTCATTGTCGGCTTGATCAACCCGAACTGGATCTTTG
CCTGCTTGGATTCGGCCACTCATCTTGCCGAAGAGGTGCCGCAGCCCGAG
AAGAACATTCCTGTTGCGATCATGGCCACCGTCGGCATTGGTTTCGTTAC
CTCATGGACCTACTGTATTGCGATGTTTTTCAGTCTCCAAGACCTTGATG
CACTTTTGAACACCGCCACAGGAGTGCCCATCCTGGAACTTTACTACCAG
GCTCTGAAGAACAGGGCAGGTGCAATTGTTCTGGAAACCCTCCTAGTAGT
GACGGGTATGGGTTGCTTGATTGCCTGCCACACTTGGCAGTCACGTCTTG
CCTGGGCCTTCGCTCGTGATCGCGGTATGCCTGGACATCAACTGCTCTCC
AAGGTCAACATGACCTTGGATGTCCCCTTACATGCCCACAACGCCAGCGC
ATTCATTGTTGCTGTTCTCGGCCTGCTCTACTTGGGATCCTCTACCGCTT
TCAACAGCATGGTCACGGCGTGCATCTCGCTTCTGTACATTTCGTACTCT
ATCCCCGTTATCTGCCTTTTGTATGTTGGTCGCGACAACATCAAGCACGG
TCCATTCTGGCTGGGCAAGTGGGGTCTTGCTGCGAACATTGTCACCCTGG
CATGGACTCTTTTCTGTCTCGTTATGTACTCATTCCCTGCGACTATGCCA
GTCACAACAGGAAATGAGTGGTCTCGATCTAGAAAAGAAGTTGAGCGTTA
ACCAGGCCTCAACCGGCGAGAATGCGTCTGGATCTGAAGATGCAGATGCG
CTTAAGCTGGCTGAGATGGGTTACACGCAGGACCTGCAGCGCAATTTCTC
CCTGCTATCCCTGGTCGGCATTGCGTTTTGTATGTCAAACTCTTGGTTCG
GTATCTCAGCATCCTTGATCACCGGTATCAGCTCTGGAGGTACCGTCCTC
ATCGTTTACGGCTTGCTCTGGATCACCTTTATCTCGACTTGTGTCGCTGC
CTCCCTCTCGGAACTGGCTAGCTCCATGCCCAATGCCGGTGGGCAATACT
TCTGGGCGAACGAGCTTGCTCCGAAGAAATATGCCCGGTTCTTCTCCTAT
CTTACCGGTTGGTTCGGATACGCTGGTGCCATTTTCGCGAGTGCCAGTGT
TGCTCTCAGTCTTGGATCCGGTGTTGTGGGAATGTGGCAACTTGGCCATC
CGTCATTATATGAACTATGTTTCGGCCGTTTATGGCGTCGTTGTCTTCAT
TGTTCTGTGTGACTGGTTTGCACGAGGAAGACGTTCATTCCGAGGCAGCC
AGAGTTGTGTGGAAGGAGAAAGTGCCGAGTAATGTTCCCAAAGCCTGGCA
TACTGTAGTAGCATACCAGCTCATCAACTTCTTCTGCTACCTCTTCAACT
GTTGGGGCAAAACCCTGCCTGCTGTGGCAAAAGCAACGCTGTACATCTCG
TTGCTTTCTTTCCTGGTCATCCTTATTGTTGTCCCGGCTTGCGCCAACCC
GCATGCCAATGGATCCTATGTTTTCGGGCATTTCGTCAACTCCACTGGCT
GGAAATCAGATGGAATCGCTTTCATTGTCGGCTTGATCAACCCGAACTGG
ATCTTTGCCTGCTTGGATTCGGCCACTCATCTTGCCGAAGAGGTGCCGCA
GCCCGAGAAGAACATTCCTGTTGCGATCATGGCCACCGTCGGCATTGGTT
TCGTTACCTCATGGACCTACTGTATTGCGATGTTTTTCAGTCTCCAAGAC
CTTGATGCACTTTTGAACACCGCCACAGGAGTGCCCATCCTGGAACTTTA
CTACCAGGCTCTGAAGAACAGGGCAGGTGCAATTGTTCTGGAAACCCTCC
TAGTAGTGACGGGTATGGGTTGCTTGATTGCCTGCCACACTTGGCAGTCA
CGTCTTGCCTGGGCCTTCGCTCGTGATCGCGGTATGCCTGGACATCAACT
GCTCTCCAAGGTCAACATGACCTTGGATGTCCCCTTACATGCCCACAACG
CCAGCGCATTCATTGTTGCTGTTCTCGGCCTGCTCTACTTGGGATCCTCT
ACCGCTTTCAACAGCATGGTCACGGCGTGCATCTCGCTTCTGTACATTTC
GTACTCTATCCCCGTTATCTGCCTTTTGTATGTTGGTCGCGACAACATCA
AGCACGGTCCATTCTGGCTGGGCAAGTGGGGTCTTGCTGCGAACATTGTC
ACCCTGGCATGGACTCTTTTCTGTCTCGTTATGTACTCATTCCCTGCGAC
TATGCCAGTCACAACAGGAAATGAGTGGTCTCGATCTAGAAAAGAAGTTG
AGCGTTAACCAGGCCTCAACCGGCGAGAATGCGTCTGGATCTGAAGATGC
AGATGCGCTTAAGCTGGCTGAGATGGGTTACACGCAGGACCTGCAGCGCA
ATTTCTCCCTGCTATCCCTGGTCGGCATTGCGTTTTGTATGTCAAACTCT
TGGTTCGGTATCTCAGCATCCTTGATCACCGGTATCAGCTCTGGAGGTAC
CGTCCTCATCGTTTACGGCTTGCTCTGGATCACCTTTATCTCGACTTGTG
TCGCTGCCTCCCTCTCGGAACTGGCTAGCTCCATGCCCAATGCCGGTGGG
CAATACTTCTGGGCGAACGAGCTTGCTCCGAAGAAATATGCCCGGTTCTT
CTCCTATCTTACCGGTTGGTTCGGATACGCTGGTGCCATTTTCGCGAGTG
CCAGTGTTGCTCTCAGTCTTGGATCCGGTGTTGTGGGAATGTGGCAACTT
GGCCATCCGTCATTATATGAACTATGTTTCGGCCGTTTATGGCGTCGTTG
TCTTCATTGTTCTGTGTGACTGGTTTGCACGAGGAAGACGTTCATTCCGA
GGCAGCCAGAGTTGTGTGGAAGGAGAAAGTGCCGAGTAATGTTCCCAAAG
CCTGGCATACTGTAGTAGCATACCAGCTCATCAACTTCTTCTGCTACCTC
TTCAACTGTTGGGGCAAAACCCTGCCTGCTGTGGCAAAAGCAACGCTGTA
CATCTCGTTGCTTTCTTTCCTGGTCATCCTTATTGTTGTCCCGGCTTGCG
CCAACCCGCATGCCAATGGATCCTATGTTTTCGGGCATTTCGTCAACTCC
ACTGGCTGGAAATCAGATGGAATCGCTTTCATTGTCGGCTTGATCAACCC
GAACTGGATCTTTGCCTGCTTGGATTCGGCCACTCATCTTGCCGAAGAGG
TGCCGCAGCCCGAGAAGAACATTCCTGTTGCGATCATGGCCACCGTCGGC
ATTGGTTTCGTTACCTCATGGACCTACTGTATTGCGATGTTTTTCAGTCT
CCAAGACCTTGATGCACTTTTGAACACCGCCACAGGAGTGCCCATCCTGG
AACTTTACTACCAGGCTCTGAAGAACAGGGCAGGTGCAATTGTTCTGGAA
ACCCTCCTAGTAGTGACGGGTATGGGTTGCTTGATTGCCTGCCACACTTG
GCAGTCACGTCTTGCCTGGGCCTTCGCTCGTGATCGCGGTATGCCTGGAC
ATCAACTGCTCTCCAAGGTCAACATGACCTTGGATGTCCCCTTACATGCC
CACAACGCCAGCGCATTCATTGTTGCTGTTCTCGGCCTGCTCTACTTGGG
ATCCTCTACCGCTTTCAACAGCATGGTCACGGCGTGCATCTCGCTTCTGT
ACATTTCGTACTCTATCCCCGTTATCTGCCTTTTGTATGTTGGTCGCGAC
AACATCAAGCACGGTCCATTCTGGCTGGGCAAGTGGGGTCTTGCTGCGAA
CATTGTCACCCTGGCATGGACTCTTTTCTGTCTCGTTATGTACTCATTCC
CTGCGACTATGCCAGTCACAACAGGAAATGAGTGGTCTCGATCTAGAAAA
GAAGTTGAGCGTTAACCAGGCCTCAACCGGCGAGAATGCGTCTGGATCTG
AAGATGCAGATGCGCTTAAGCTGGCTGAGATGGGTTACACGCAGGACCTG
CAGCGCAATTTCTCCCTGCTATCCCTGGTCGGCATTGCGTTTTGTATGTC
AAACTCTTGGTTCGGTATCTCAGCATCCTTGATCACCGGTATCAGCTCTG
GAGGTACCGTCCTCATCGTTTACGGCTTGCTCTGGATCACCTTTATCTCG
ACTTGTGTCGCTGCCTCCCTCTCGGAACTGGCTAGCTCCATGCCCAATGC
CGGTGGGCAATACTTCTGGGCGAACGAGCTTGCTCCGAAGAAATATGCCC
GGTTCTTCTCCTATCTTACCGGTTGGTTCGGATACGCTGGTGCCATTTTC
GCGAGTGCCAGTGTTGCTCTCAGTCTTGGATCCGGTGTTGTGGGAATGTG
GCAACTTGGCCATCCGTCATT

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_006261	CBS51388_006261	Aspergillus niger CBS 513.88	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006261-T1	CBS51388_006261-T1-protein	Aspergillus niger CBS 513.88	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006261-T1.cds	CBS51388_006261-T1.cds	Aspergillus niger CBS 513.88	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006261-T1.exon3	CBS51388_006261-T1.exon3	Aspergillus niger CBS 513.88	exon
CBS51388_006261-T1.exon2	CBS51388_006261-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_006261-T1.exon1	CBS51388_006261-T1.exon1	Aspergillus niger CBS 513.88	exon

Properties


Property Name	Value
Note	antiSMASH:Cluster_9.7
DBxref	InterPro:IPR002293
DBxref	PFAM:PF13520
DBxref	PFAM:PF00324
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An09	supercontig	An09:1115625..1117320 -

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CBS51388_006261-T1, CBS51388_006261-T1 (mRNA) Aspergillus niger CBS 513.88