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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1169888..1172204+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006275-T1 ID=CBS51388_006275-T1|Name=CBS51388_006275-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2317bp|location=Sequence derived from alignment at An09:1169888..1172204+ (Aspergillus niger CBS 513.88)
ATGGGTTCTAATTCACCACCACCCAATGATCAGGATGAGCTCTCCTCCCC
GCCCGAGGAACTCGACTACTATGCCATCCTTAATCTGCCGCGCTCTCCAG
CTCCCACGGAAGCTCAGATCCGGTCCGCGTATCGCACCCTCACGCTAAGT
TTTCATCCGGATAAGCAGCCGGCGGAGTTGGCGGACTCTGCGCGACGACA
TTTCGATCGTATTCAGGAGGCATATGATACGCTGGTGGATCCGAAGAAGA
GGGCTGTGTATGATGAATTGGGTGTGCAGGGGATGAAACAGGAATGGGTG
ATTCTTGAAAGAATGGCCAAGGATATGAGGGTCGGGGTGAGGGCGATGTC
TGGGGAGGAGTTTCGGGGGTGGTTCTTGGAGGTGATGAAGAGGAGGGAGA
GAGCTGTGGTGGAGAGGATGGTTGGGTCGAGGGTGAGTTTTTCTTTCCTT
CTCTTGTTGCGTCCTTTCTTCCGTTTCTTTTGTTCGTGGGGGCGGGTTGG
GGTTTATGGGTAAGTCATGTGTGCTGATGGATGCAAATTGTACAGGGCTC
TATTACTATTGGGTTCGATGTCTCTAATGCTGTGTCATACGATGAGGAGG
AGGACGCCTTGTATATTGAAATGCCGTCTCCGAAACCCTCGAATTATGCT
CTGGGGTTCTCTTTCAAGGCGCCACTGCCGCGACTGGGCTTTTTCCTGGG
GAAGGAAAGCGAGGATGAGAATGAGAACGAAAACGACGAGGATCATGAGG
CCAGGAAACCGTTCAGAGAGTATGGTGAGGATACGGAGTTGATGTTCAAT
GCGGGCATCTCGGGGGAGATAGAGCAGATGCACCAGGAAGCGAACTTTAA
ATTCCCGGATGGCAGGCAAGAGACTCACCTCGTATGTTGGCCGAGTTACG
AAGTCCTTTGATTTGGAAGTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCGATGTTAATTTTGACCGGTCGCTGCA
ACGTGCGCCTCCTCGCCTTGGTCTTAAGGTCACCAGGCAGATAGGTGATA
GGAGGTTCTTGGTAAGTAGCTGGTCAAGCGGCTCGTTAATCTGGCCGAAA
CGTTTCCGCCACTCCTTATTACCCCTTATAGAGATCGGGTTGAACGCCGA
GACTGCAATGACCGTTCCAGCTCAGTCCAGTCATTTCCAAATCGGCGTCG
TCTCTCAGCCCAAGCGGCTGATTTCCCCGGCGGATGTCGAGGAAGAGGTG
GAGGGGGACGAGGAGGATGAGGAGTTTGAAATGGTTCGCCGCCAGCAGCG
CAAGCAAACTGGAGCTGCCGAAGCCTGGCAGACGAACGTGATAGCGACCC
CGATGCAAACTACTTTGTCATTTGTGTATTCGCGCAATGTTTTCTCAGGG
AAAACGGCCTACGAGCGTTTACGCTCTGAATGGAGCTCCGAGGGCCATCA
TTCGTTGCCGGAGGACAATGAGCCGCGATCTGTACGGGTAAATGTTGAGA
CTACCGTGGGGCTTGATTTGGCGCTTGGATGGCATATTGAGGGGACCCGC
CAGGTTGGCGATTTCACTCGCTTGGGTCTTGGGGTTGGTGTTCGAGATAT
GCAGGGCCTCGTCGTGACTATGTCCTGGAGCAGGCTGGGCCAGAAGATCA
GGGTGCCCGTATCTGTTATCCCATTTGGACTTGTCGATGCGGATGTAGCG
GCAATGGCTATTATCTGCCCGTGGCTAGCGTACTGCGCGCTAGAGTTTGG
ATTTATTCGTCCAAGGGAGAGAAAGAGGCATCGCCGGGCGATTGCCCGAC
GACAGAAGCAGCTGAGAAGACTTGTGCCCAAGAAGCGGGCCGAGAGCCAA
GAAGCTATTGATATTATGACCGAGCAAGTACAACGCCGGCAGGCGAAAGA
GGCTAAGCAGGGTGGTTTGGTCATTCTCCGGGCTGAGTACGGCTACTATC
CTTCGAAGAAGGACAGGGAAAGCGGCCGAGAACCGGAAGTCACGGACGTC
TCCATCCCAGTAGCTGCACTGGTTGACCACGGACAACTGGCCATCCCCAA
GGAGATGGTCAAGGTGAGTTTACAGTTCCCTTCTGCAGGCGATGCTAGCA
GTGCTGATTTGAGTTTGACGCAGTCCCATATCCTTGGATTCCACGACCCG
GCTCCACTTCTGCCTAAGATGCTCAAGATATGGTACAATTACCATGGACA
GGAGCATTACGTCGAAGCAAAGGAGACAGAAGACATTTCCTGTCCTATGC
GTTCGCATCTATTGTAG back to topCoding sequence (CDS) from alignment at An09:1169888..1172204+ >CBS51388_006275-T1 ID=CBS51388_006275-T1|Name=CBS51388_006275-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7692bp|location=Sequence derived from alignment at An09:1169888..1172204+ (Aspergillus niger CBS 513.88)
ATGGGTTCTAATTCACCACCACCCAATGATCAGGATGAGCTCTCCTCCCC
GCCCGAGGAACTCGACTACTATGCCATCCTTAATCTGCCGCGCTCTCCAG
CTCCCACGGAAGCTCAGATCCGGTCCGCGTATCGCACCCTCACGCTAAGT
TTTCATCCGGATAAGCAGCCGGCGGAGTTGGCGGACTCTGCGCGACGACA
TTTCGATCGTATTCAGGAGGCATATGATACGCTGGTGGATCCGAAGAAGA
GGGCTGTGTATGATGAATTGGGTGTGCAGGGGATGAAACAGGAATGGGTG
ATTCTTGAAAGAATGGCCAAGGATATGAGGGTCGGGGTGAGGGCGATGTC
TGGGGAGGAGTTTCGGGGGTGGTTCTTGGAGGTGATGAAGAGGAGGGAGA
GAGCTGTGGTGGAGAGGATGGTTGGGTCGAGGGGCTCTATTACTATTGGG
TTCGATGTCTCTAATGCTGTGTCATACGATGAGGAGGAGGACGCCTTGTA
TATTGAAATGCCGTCTCCGAAACCCTCGAATTATGCTCTGGGGTTCTCTT
TCAAGGCGCCACTGCCGCGACTGGGCTTTTTCCTGGGGAAGGAAAGCGAG
GATGAGAATGAGAACGAAAACGACGAGGATCATGAGGCCAGGAAACCGTT
CAGAGAGTATGGTGAGGATACGGAGTTGATGTTCAATGCGGGCATCTCGG
GGGAGATAGAGCAGATGCACCAGGAAGCGAACTTTAAATTCCCGGATGGC
AGGCAAGAGACTCACCTCATAGGTGATAGGAGGTTCTTGATCGGGTTGAA
CGCCGAGACTGCAATGACCGTTCCAGCTCAGTCCAGTCATTTCCAAATCG
GCGTCGTCTCTCAGCCCAAGCGGCTGATTTCCCCGGCGGATGTCGAGGAA
GAGGTGGAGGGGGACGAGGAGGATGAGGAGTTTGAAATGGTTCGCCGCCA
GCAGCGCAAGCAAACTGGAGCTGCCGAAGCCTGGCAGACGAACGTGATAG
CGACCCCGATGCAAACTACTTTGTCATTTGTGTATTCGCGCAATGTTTTC
TCAGGGAAAACGGCCTACGAGCGTTTACGCTCTGAATGGAGCTCCGAGGG
CCATCATTCGTTGCCGGAGGACAATGAGCCGCGATCTGTACGGGTAAATG
TTGAGACTACCGTGGGGCTTGATTTGGCGCTTGGATGGCATATTGAGGGG
ACCCGCCAGGTTGGCGATTTCACTCGCTTGGGTCTTGGGGTTGGTGTTCG
AGATATGCAGGGCCTCGTCGTGACTATGTCCTGGAGCAGGCTGGGCCAGA
AGATCAGGGTGCCCGTATCTGTTATCCCATTTGGACTTGTCGATGCGGAT
GTAGCGGCAATGGCTATTATCTGCCCGTGGCTAGCGTACTGCGCGCTAGA
GTTTGGATTTATTCGTCCAAGGGAGAGAAAGAGGCATCGCCGGGCGATTG
CCCGACGACAGAAGCAGCTGAGAAGACTTGTGCCCAAGAAGCGGGCCGAG
AGCCAAGAAGCTATTGATATTATGACCGAGCAAGTACAACGCCGGCAGGC
GAAAGAGGCTAAGCAGGGTGGTTTGGTCATTCTCCGGGCTGAGTACGGCT
ACTATCCTTCGAAGAAGGACAGGGAAAGCGGCCGAGAACCGGAAGTCACG
GACGTCTCCATCCCAGTAGCTGCACTGGTTGACCACGGACAACTGGCCAT
CCCCAAGGAGATGGTCAAGGTGAGTTTACAGTTCCCTTCTGCAGGCGATG
CTAGCAGTGCTGATTTGAGTTTGACGCAGTCCCATATCCTTGGATTCCAC
GACCCGGCTCCACTTCTGCCTAAGATGCTCAAGATATGGTACAATTACCA
TGGACAGGAGCATTACGTCGAAGCAAAGGAGACAGAAGACATTTCCTGTC
CTATGCGTTCGCATCTATTGTAGATGGGTTCTAATTCACCACCACCCAAT
GATCAGGATGAGCTCTCCTCCCCGCCCGAGGAACTCGACTACTATGCCAT
CCTTAATCTGCCGCGCTCTCCAGCTCCCACGGAAGCTCAGATCCGGTCCG
CGTATCGCACCCTCACGCTAAGTTTTCATCCGGATAAGCAGCCGGCGGAG
TTGGCGGACTCTGCGCGACGACATTTCGATCGTATTCAGGAGGCATATGA
TACGCTGGTGGATCCGAAGAAGAGGGCTGTGTATGATGAATTGGGTGTGC
AGGGGATGAAACAGGAATGGGTGATTCTTGAAAGAATGGCCAAGGATATG
AGGGTCGGGGTGAGGGCGATGTCTGGGGAGGAGTTTCGGGGGTGGTTCTT
GGAGGTGATGAAGAGGAGGGAGAGAGCTGTGGTGGAGAGGATGGTTGGGT
CGAGGGGCTCTATTACTATTGGGTTCGATGTCTCTAATGCTGTGTCATAC
GATGAGGAGGAGGACGCCTTGTATATTGAAATGCCGTCTCCGAAACCCTC
GAATTATGCTCTGGGGTTCTCTTTCAAGGCGCCACTGCCGCGACTGGGCT
TTTTCCTGGGGAAGGAAAGCGAGGATGAGAATGAGAACGAAAACGACGAG
GATCATGAGGCCAGGAAACCGTTCAGAGAGTATGGTGAGGATACGGAGTT
GATGTTCAATGCGGGCATCTCGGGGGAGATAGAGCAGATGCACCAGGAAG
CGAACTTTAAATTCCCGGATGGCAGGCAAGAGACTCACCTCATAGGTGAT
AGGAGGTTCTTGATCGGGTTGAACGCCGAGACTGCAATGACCGTTCCAGC
TCAGTCCAGTCATTTCCAAATCGGCGTCGTCTCTCAGCCCAAGCGGCTGA
TTTCCCCGGCGGATGTCGAGGAAGAGGTGGAGGGGGACGAGGAGGATGAG
GAGTTTGAAATGGTTCGCCGCCAGCAGCGCAAGCAAACTGGAGCTGCCGA
AGCCTGGCAGACGAACGTGATAGCGACCCCGATGCAAACTACTTTGTCAT
TTGTGTATTCGCGCAATGTTTTCTCAGGGAAAACGGCCTACGAGCGTTTA
CGCTCTGAATGGAGCTCCGAGGGCCATCATTCGTTGCCGGAGGACAATGA
GCCGCGATCTGTACGGGTAAATGTTGAGACTACCGTGGGGCTTGATTTGG
CGCTTGGATGGCATATTGAGGGGACCCGCCAGGTTGGCGATTTCACTCGC
TTGGGTCTTGGGGTTGGTGTTCGAGATATGCAGGGCCTCGTCGTGACTAT
GTCCTGGAGCAGGCTGGGCCAGAAGATCAGGGTGCCCGTATCTGTTATCC
CATTTGGACTTGTCGATGCGGATGTAGCGGCAATGGCTATTATCTGCCCG
TGGCTAGCGTACTGCGCGCTAGAGTTTGGATTTATTCGTCCAAGGGAGAG
AAAGAGGCATCGCCGGGCGATTGCCCGACGACAGAAGCAGCTGAGAAGAC
TTGTGCCCAAGAAGCGGGCCGAGAGCCAAGAAGCTATTGATATTATGACC
GAGCAAGTACAACGCCGGCAGGCGAAAGAGGCTAAGCAGGGTGGTTTGGT
CATTCTCCGGGCTGAGTACGGCTACTATCCTTCGAAGAAGGACAGGGAAA
GCGGCCGAGAACCGGAAGTCACGGACGTCTCCATCCCAGTAGCTGCACTG
GTTGACCACGGACAACTGGCCATCCCCAAGGAGATGGTCAAGGTGAGTTT
ACAGTTCCCTTCTGCAGGCGATGCTAGCAGTGCTGATTTGAGTTTGACGC
AGTCCCATATCCTTGGATTCCACGACCCGGCTCCACTTCTGCCTAAGATG
CTCAAGATATGGTACAATTACCATGGACAGGAGCATTACGTCGAAGCAAA
GGAGACAGAAGACATTTCCTGTCCTATGCGTTCGCATCTATTGTAGATGG
GTTCTAATTCACCACCACCCAATGATCAGGATGAGCTCTCCTCCCCGCCC
GAGGAACTCGACTACTATGCCATCCTTAATCTGCCGCGCTCTCCAGCTCC
CACGGAAGCTCAGATCCGGTCCGCGTATCGCACCCTCACGCTAAGTTTTC
ATCCGGATAAGCAGCCGGCGGAGTTGGCGGACTCTGCGCGACGACATTTC
GATCGTATTCAGGAGGCATATGATACGCTGGTGGATCCGAAGAAGAGGGC
TGTGTATGATGAATTGGGTGTGCAGGGGATGAAACAGGAATGGGTGATTC
TTGAAAGAATGGCCAAGGATATGAGGGTCGGGGTGAGGGCGATGTCTGGG
GAGGAGTTTCGGGGGTGGTTCTTGGAGGTGATGAAGAGGAGGGAGAGAGC
TGTGGTGGAGAGGATGGTTGGGTCGAGGGGCTCTATTACTATTGGGTTCG
ATGTCTCTAATGCTGTGTCATACGATGAGGAGGAGGACGCCTTGTATATT
GAAATGCCGTCTCCGAAACCCTCGAATTATGCTCTGGGGTTCTCTTTCAA
GGCGCCACTGCCGCGACTGGGCTTTTTCCTGGGGAAGGAAAGCGAGGATG
AGAATGAGAACGAAAACGACGAGGATCATGAGGCCAGGAAACCGTTCAGA
GAGTATGGTGAGGATACGGAGTTGATGTTCAATGCGGGCATCTCGGGGGA
GATAGAGCAGATGCACCAGGAAGCGAACTTTAAATTCCCGGATGGCAGGC
AAGAGACTCACCTCATAGGTGATAGGAGGTTCTTGATCGGGTTGAACGCC
GAGACTGCAATGACCGTTCCAGCTCAGTCCAGTCATTTCCAAATCGGCGT
CGTCTCTCAGCCCAAGCGGCTGATTTCCCCGGCGGATGTCGAGGAAGAGG
TGGAGGGGGACGAGGAGGATGAGGAGTTTGAAATGGTTCGCCGCCAGCAG
CGCAAGCAAACTGGAGCTGCCGAAGCCTGGCAGACGAACGTGATAGCGAC
CCCGATGCAAACTACTTTGTCATTTGTGTATTCGCGCAATGTTTTCTCAG
GGAAAACGGCCTACGAGCGTTTACGCTCTGAATGGAGCTCCGAGGGCCAT
CATTCGTTGCCGGAGGACAATGAGCCGCGATCTGTACGGGTAAATGTTGA
GACTACCGTGGGGCTTGATTTGGCGCTTGGATGGCATATTGAGGGGACCC
GCCAGGTTGGCGATTTCACTCGCTTGGGTCTTGGGGTTGGTGTTCGAGAT
ATGCAGGGCCTCGTCGTGACTATGTCCTGGAGCAGGCTGGGCCAGAAGAT
CAGGGTGCCCGTATCTGTTATCCCATTTGGACTTGTCGATGCGGATGTAG
CGGCAATGGCTATTATCTGCCCGTGGCTAGCGTACTGCGCGCTAGAGTTT
GGATTTATTCGTCCAAGGGAGAGAAAGAGGCATCGCCGGGCGATTGCCCG
ACGACAGAAGCAGCTGAGAAGACTTGTGCCCAAGAAGCGGGCCGAGAGCC
AAGAAGCTATTGATATTATGACCGAGCAAGTACAACGCCGGCAGGCGAAA
GAGGCTAAGCAGGGTGGTTTGGTCATTCTCCGGGCTGAGTACGGCTACTA
TCCTTCGAAGAAGGACAGGGAAAGCGGCCGAGAACCGGAAGTCACGGACG
TCTCCATCCCAGTAGCTGCACTGGTTGACCACGGACAACTGGCCATCCCC
AAGGAGATGGTCAAGGTGAGTTTACAGTTCCCTTCTGCAGGCGATGCTAG
CAGTGCTGATTTGAGTTTGACGCAGTCCCATATCCTTGGATTCCACGACC
CGGCTCCACTTCTGCCTAAGATGCTCAAGATATGGTACAATTACCATGGA
CAGGAGCATTACGTCGAAGCAAAGGAGACAGAAGACATTTCCTGTCCTAT
GCGTTCGCATCTATTGTAGATGGGTTCTAATTCACCACCACCCAATGATC
AGGATGAGCTCTCCTCCCCGCCCGAGGAACTCGACTACTATGCCATCCTT
AATCTGCCGCGCTCTCCAGCTCCCACGGAAGCTCAGATCCGGTCCGCGTA
TCGCACCCTCACGCTAAGTTTTCATCCGGATAAGCAGCCGGCGGAGTTGG
CGGACTCTGCGCGACGACATTTCGATCGTATTCAGGAGGCATATGATACG
CTGGTGGATCCGAAGAAGAGGGCTGTGTATGATGAATTGGGTGTGCAGGG
GATGAAACAGGAATGGGTGATTCTTGAAAGAATGGCCAAGGATATGAGGG
TCGGGGTGAGGGCGATGTCTGGGGAGGAGTTTCGGGGGTGGTTCTTGGAG
GTGATGAAGAGGAGGGAGAGAGCTGTGGTGGAGAGGATGGTTGGGTCGAG
GGGCTCTATTACTATTGGGTTCGATGTCTCTAATGCTGTGTCATACGATG
AGGAGGAGGACGCCTTGTATATTGAAATGCCGTCTCCGAAACCCTCGAAT
TATGCTCTGGGGTTCTCTTTCAAGGCGCCACTGCCGCGACTGGGCTTTTT
CCTGGGGAAGGAAAGCGAGGATGAGAATGAGAACGAAAACGACGAGGATC
ATGAGGCCAGGAAACCGTTCAGAGAGTATGGTGAGGATACGGAGTTGATG
TTCAATGCGGGCATCTCGGGGGAGATAGAGCAGATGCACCAGGAAGCGAA
CTTTAAATTCCCGGATGGCAGGCAAGAGACTCACCTCATAGGTGATAGGA
GGTTCTTGATCGGGTTGAACGCCGAGACTGCAATGACCGTTCCAGCTCAG
TCCAGTCATTTCCAAATCGGCGTCGTCTCTCAGCCCAAGCGGCTGATTTC
CCCGGCGGATGTCGAGGAAGAGGTGGAGGGGGACGAGGAGGATGAGGAGT
TTGAAATGGTTCGCCGCCAGCAGCGCAAGCAAACTGGAGCTGCCGAAGCC
TGGCAGACGAACGTGATAGCGACCCCGATGCAAACTACTTTGTCATTTGT
GTATTCGCGCAATGTTTTCTCAGGGAAAACGGCCTACGAGCGTTTACGCT
CTGAATGGAGCTCCGAGGGCCATCATTCGTTGCCGGAGGACAATGAGCCG
CGATCTGTACGGGTAAATGTTGAGACTACCGTGGGGCTTGATTTGGCGCT
TGGATGGCATATTGAGGGGACCCGCCAGGTTGGCGATTTCACTCGCTTGG
GTCTTGGGGTTGGTGTTCGAGATATGCAGGGCCTCGTCGTGACTATGTCC
TGGAGCAGGCTGGGCCAGAAGATCAGGGTGCCCGTATCTGTTATCCCATT
TGGACTTGTCGATGCGGATGTAGCGGCAATGGCTATTATCTGCCCGTGGC
TAGCGTACTGCGCGCTAGAGTTTGGATTTATTCGTCCAAGGGAGAGAAAG
AGGCATCGCCGGGCGATTGCCCGACGACAGAAGCAGCTGAGAAGACTTGT
GCCCAAGAAGCGGGCCGAGAGCCAAGAAGCTATTGATATTATGACCGAGC
AAGTACAACGCCGGCAGGCGAAAGAGGCTAAGCAGGGTGGTTTGGTCATT
CTCCGGGCTGAGTACGGCTACTATCCTTCGAAGAAGGACAGGGAAAGCGG
CCGAGAACCGGAAGTCACGGACGTCTCCATCCCAGTAGCTGCACTGGTTG
ACCACGGACAACTGGCCATCCCCAAGGAGATGGTCAAGGTGAGTTTACAG
TTCCCTTCTGCAGGCGATGCTAGCAGTGCTGATTTGAGTTTGACGCAGTC
CCATATCCTTGGATTCCACGACCCGGCTCCACTTCTGCCTAAGATGCTCA
AGATATGGTACAATTACCATGGACAGGAGCATTACGTCGAAGCAAAGGAG
ACAGAAGACATTTCCTGTCCTATGCGTTCGCATCTATTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR024586 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF11875 |
| DBxref | PFAM:PF00226 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1169888..1172204 + |
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