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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1318879..1320303- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006320-T1 ID=CBS51388_006320-T1|Name=CBS51388_006320-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1425bp|location=Sequence derived from alignment at An09:1318879..1320303- (Aspergillus niger CBS 513.88)
ATGCCTCCTTCTGAGCACAGTCTCTTCCAATTCCTCGCCAAAGCCCTCCA
AACCCACCACCGCTTCCTCGCCGGCCGACTCTCGCGCGCCGAAAGCCCTA
TCTACGTCATCGGCAACCCCTCCGCCGACCTCGATTCCATCATCTCCGCC
ATTGTCTATGCCTCCTTTGCCCATCCCCGGCCTCACGTCCCTCTAATCAA
CCTAGCTACTGTCCCGACAGGCCCTGAACTGCGCCGTCTGCGTCCCGAAT
TCATCAAATCCCTCTGGCTCTCCACGCACCCCCCAGTCCCAGACGAAGAA
ACATGGTCCGACACGCCCGAGTCCGCCGGTCCCCTTCTCCAAGAACACAT
CCTCACCGTCTCCGACTTTGCAACTCACCTCCAAGACTACAACCACAATG
ATAATCAATTAACCGCCGACGCCGTCCTCGTCGACTGGAACGCCCTCCCC
ATCCGCTCCCCCAACCAACTCCGAGGCCAAGGCTCCCTCCCCGCCCTCCC
CAACCTCACCTTCACCGTCCTCGGCTGCATCGACCACCACGTCGACGAAC
ACTTCCTGGCCCCAATCACCGACCCAGACCAGCCCTTCCTCCTCCAACCC
GCCGGATCATGCACCTCGCTCGTAGTCAACATGCTGGATAAAATGGACCG
CTGGCGGCGCACTTCCTCCACCACCTCCAGCCCTTCGGAGTTATCGTCAG
AACTCCAACTAGCCAAGCTAGCCATGAGCGCTATTCTCATCGATACGGCG
AACTTCACTGCCAAGGAGAAAGTCACGGACTCGGATACGCTTGCGTATAG
TTTTCTGAGATCGAAGATTAATGCGATTTCGAATCGAGATGGAGATGGGG
CTGGGAAGCCATGGGATCATAATAAGTTCTACGAGGAAGTGGTGGCTGCG
AAGCAGGGGAGTTTGGATTTGTTGACTGTTCCGGAGGTGTTGGAGAGGGA
TTATAAGGAGTGGAGCGAGAAACCCTCATCATCTTCTTTTTCTCAGGAGG
TGAAAATTGGGATCTGTTCGATGGTGCGGTCATTGCCGTGGTTGGAGCGA
AAAGCGGGCGGGGCGGATAAGCTCCTCGACGCTGTGGTGGAATATGCGAC
GAGGGAGGAATTGGATGTGGTGATGGTCATGACGGCGTTTAGTGGTGCGG
AGGGGAATTTTTGTCGGGAGTTGTTGGTGTGTGCGCGTGAAGAGGGTGTG
CGTGGAGTGGAAGTATTTGAGGAGCAGGCGGGAGTGCAGTTGGGGTTGGA
GAAGTGGACGGTGTTGGATGGAGATGAGGAGAGTAAGAGTAGTGAGTTGG
GAGATGTAAAGTGGGAGAAAGATGATGACCAGCCGTGGAGGAAATGGATC
TGGGTGCAGGAGGATGTCACGAAGAGTCGAAAACAGGTGGCCCCCTTGAT
TAGGGAGGCTGTGAAGTCTTTGTAA back to topCoding sequence (CDS) from alignment at An09:1318879..1320303- >CBS51388_006320-T1 ID=CBS51388_006320-T1|Name=CBS51388_006320-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1425bp|location=Sequence derived from alignment at An09:1318879..1320303- (Aspergillus niger CBS 513.88)
ATGCCTCCTTCTGAGCACAGTCTCTTCCAATTCCTCGCCAAAGCCCTCCA
AACCCACCACCGCTTCCTCGCCGGCCGACTCTCGCGCGCCGAAAGCCCTA
TCTACGTCATCGGCAACCCCTCCGCCGACCTCGATTCCATCATCTCCGCC
ATTGTCTATGCCTCCTTTGCCCATCCCCGGCCTCACGTCCCTCTAATCAA
CCTAGCTACTGTCCCGACAGGCCCTGAACTGCGCCGTCTGCGTCCCGAAT
TCATCAAATCCCTCTGGCTCTCCACGCACCCCCCAGTCCCAGACGAAGAA
ACATGGTCCGACACGCCCGAGTCCGCCGGTCCCCTTCTCCAAGAACACAT
CCTCACCGTCTCCGACTTTGCAACTCACCTCCAAGACTACAACCACAATG
ATAATCAATTAACCGCCGACGCCGTCCTCGTCGACTGGAACGCCCTCCCC
ATCCGCTCCCCCAACCAACTCCGAGGCCAAGGCTCCCTCCCCGCCCTCCC
CAACCTCACCTTCACCGTCCTCGGCTGCATCGACCACCACGTCGACGAAC
ACTTCCTGGCCCCAATCACCGACCCAGACCAGCCCTTCCTCCTCCAACCC
GCCGGATCATGCACCTCGCTCGTAGTCAACATGCTGGATAAAATGGACCG
CTGGCGGCGCACTTCCTCCACCACCTCCAGCCCTTCGGAGTTATCGTCAG
AACTCCAACTAGCCAAGCTAGCCATGAGCGCTATTCTCATCGATACGGCG
AACTTCACTGCCAAGGAGAAAGTCACGGACTCGGATACGCTTGCGTATAG
TTTTCTGAGATCGAAGATTAATGCGATTTCGAATCGAGATGGAGATGGGG
CTGGGAAGCCATGGGATCATAATAAGTTCTACGAGGAAGTGGTGGCTGCG
AAGCAGGGGAGTTTGGATTTGTTGACTGTTCCGGAGGTGTTGGAGAGGGA
TTATAAGGAGTGGAGCGAGAAACCCTCATCATCTTCTTTTTCTCAGGAGG
TGAAAATTGGGATCTGTTCGATGGTGCGGTCATTGCCGTGGTTGGAGCGA
AAAGCGGGCGGGGCGGATAAGCTCCTCGACGCTGTGGTGGAATATGCGAC
GAGGGAGGAATTGGATGTGGTGATGGTCATGACGGCGTTTAGTGGTGCGG
AGGGGAATTTTTGTCGGGAGTTGTTGGTGTGTGCGCGTGAAGAGGGTGTG
CGTGGAGTGGAAGTATTTGAGGAGCAGGCGGGAGTGCAGTTGGGGTTGGA
GAAGTGGACGGTGTTGGATGGAGATGAGGAGAGTAAGAGTAGTGAGTTGG
GAGATGTAAAGTGGGAGAAAGATGATGACCAGCCGTGGAGGAAATGGATC
TGGGTGCAGGAGGATGTCACGAAGAGTCGAAAACAGGTGGCCCCCTTGAT
TAGGGAGGCTGTGAAGTCTTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016462 | pyrophosphatase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_9.8 |
| DBxref | InterPro:IPR038763 |
| DBxref | InterPro:IPR038222 |
| DBxref | InterPro:IPR001667 |
| DBxref | InterPro:IPR004097 |
| DBxref | PFAM:PF02833 |
| DBxref | PFAM:PF01368 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1318879..1320303 - |
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