|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1345327..1346328+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006329-T1 ID=CBS51388_006329-T1|Name=CBS51388_006329-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1002bp|location=Sequence derived from alignment at An09:1345327..1346328+ (Aspergillus niger CBS 513.88)
ATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTGTACGT
CTTCCGCTCCCATGGACGCATCGTAATGGAACGCTAACTGGCCGCTTGAA
ACCAACAGCCTCATCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCT
CAGTATTCACCGGTCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTT
TGATTATGCTCGTCGCGTCCGTCTTGAAGTAAGGCCACCAGTCTAGGAAT
TGCGGCCCTTGGGGGTTTCGGCGTTAACAAATTTCGCTAGGATCTTCTAC
TGGTTCGGCGCTTACTACTCTCTTTCGCTCCTGATTCAGGCCGTTATCAC
TGTCGGGGTGCAGGTAGTCTTGTTGAAGGTTGCATTGGACAATCGGCCAT
CGCCCGGGTTGAAGAACAGCGTTGAGCATGTTCCTTTCAGCAGTGTGGAC
AATGGCGGTGGATTTGCGAGACCCTACGATTTCTGGCAATGGAAGAGCGC
GAAACCGTACGTCCTAATCTTTTCTCTCCTTTCAGAGAGACCATTCTATT
GCAGCGAATACTAACCCACAGTCGTCGATAGTTACTGGATGTTTTTGGCG
TATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTGC
CTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTGG
AAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTCG
TGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATCT
CATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCTT
TCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGTG
CAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTCG
AGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACTT
GA back to topCoding sequence (CDS) from alignment at An09:1345327..1346328+ >CBS51388_006329-T1 ID=CBS51388_006329-T1|Name=CBS51388_006329-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3204bp|location=Sequence derived from alignment at An09:1345327..1346328+ (Aspergillus niger CBS 513.88)
ATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCTCAT
CACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACCGGT
CGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTCGTC
GCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCTTTC
GCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGTTGA
AGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTTGAG
CATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACCCTA
CGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGGCGT
ATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTGCC
TACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTGGA
AGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTCGT
GCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATCTC
ATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCTTT
CCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGTGC
AGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTCGA
GGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACTTG
AATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCTCA
TCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACCGG
TCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTCGT
CGCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCTTT
CGCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGTTG
AAGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTTGA
GCATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACCCT
ACGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGGCG
TATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTGC
CTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTGG
AAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTCG
TGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATCT
CATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCTT
TCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGTG
CAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTCG
AGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACTT
GAATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCTC
ATCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACCG
GTCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTCG
TCGCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCTT
TCGCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGTT
GAAGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTTG
AGCATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACCC
TACGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGGC
GTATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATTG
CCTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGTG
GAAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTTC
GTGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGATC
TCATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGCT
TTCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCGT
GCAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCTC
GAGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGACT
TGAATGTATCTTGTGTCGCAAGCCCTGGAATATGGGGCTCCCCTCTTCCT
CATCACCTCTCCAGTGACTTCCTATGCGGACCAGATCCTCAGTATTCACC
GGTCGAGGAGCTCGGCTGGTTTCTCGCTGGACATCCCTTTGATTATGCTC
GTCGCGTCCGTCTTGAAGATCTTCTACTGGTTCGGCGCTTACTACTCTCT
TTCGCTCCTGATTCAGGCCGTTATCACTGTCGGGGTGCAGGTAGTCTTGT
TGAAGGTTGCATTGGACAATCGGCCATCGCCCGGGTTGAAGAACAGCGTT
GAGCATGTTCCTTTCAGCAGTGTGGACAATGGCGGTGGATTTGCGAGACC
CTACGATTTCTGGCAATGGAAGAGCGCGAAACCTTACTGGATGTTTTTGG
CGTATTTCATCGGCGCGCTCACCTTCATCCAAGTCCTCCTGCCCCCAATT
GCCTACTCGGAATCCTACATCGGTCTTCTTGGATACGTCGGTCTCGCCGT
GGAAGCCACGCTGCCTCTTCCCCAGATTTTCAAGAACCATAAGTCCCGTT
CGTGCGCAGGATTCCGGCTCTCGGTGCTCGCGGCTTGGATCCTCGGTGAT
CTCATGAAGCTGAGTTACTTCTTCTGCAGCCAGGAGGTGATCCCTTGGGC
TTTCCGGATGTGTGGTCTCTTCCAGTGTGTTTGCGACCTGTACTTGGGCG
TGCAGTTTTGGATGTACAGTGGTGCCTCGTTCCGGACTGCGGGCAGTCCT
CGAGGACCTAGTGAGAGCTATAATGTGGAGGAGAAGGACATCCGAATGAC
TTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006603 |
| DBxref | PFAM:PF04193 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1345327..1346328 + |
|
