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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1366276..1367480- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006338-T1 ID=CBS51388_006338-T1|Name=CBS51388_006338-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1205bp|location=Sequence derived from alignment at An09:1366276..1367480- (Aspergillus niger CBS 513.88)
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTGAGTATTACTCTTCA
TTTACCTGAGCTCCAGCTCCAAACATCATTGCGACAACCCCTCCTCTCTT
ATCGATAACACCGCGCAACTGCGCACAGGATGGAAGGATGGCCACACCTA
CACATACAATGCGCGCACATCCTATCTACCTCTATCCATCTATACACCTT
CCAATACATTGTCCAGAGAGAAGCTAACAAGCTATCTCCCAGGTCCTCTC
GGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCG
CGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACC
GGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCA
AGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCA
CCACACCCAATGCCTCCTCCACCTCACAACCAGATACAACAACAACGGCA
ACAGAAACAGAAGGTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCAT
GTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCG
GGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGG
AATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGA
GCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACGATCGATGCTT
CCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACA
CCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGT
TAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATA
CGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGG
CAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGT
TGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGG
ATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAA
GAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTA
TGCGCGGTTCGAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGC
AATGA back to topCoding sequence (CDS) from alignment at An09:1366276..1367480- >CBS51388_006338-T1 ID=CBS51388_006338-T1|Name=CBS51388_006338-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2691bp|location=Sequence derived from alignment at An09:1366276..1367480- (Aspergillus niger CBS 513.88)
AAGGTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGC
TTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAAAAA
GACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACTG
ATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCT
CTTGCGGAGCAGCTCTTGACGCTTTGTACGATCGATGCTTCCTCTGCAAC
TGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCGG
TAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGG
ATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTCCGTG
CTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGG
CAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTTGGG
TTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGGATAGTGAGGA
TGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGATG
AGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGGTTC
GAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGCAATGAGTCCT
CTCGGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCC
TCGCGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTC
ACCGGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTAC
CCAAGCGCCAGGCGATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGAAG
GTGGAAGCGCCATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTC
CTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAAAAAGAC
AGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACTGATT
ACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTT
GCGGAGCAGCTCTTGACGCTTTGTACGATCGATGCTTCCTCTGCAACTGG
AATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCGGTAG
CAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATT
CCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTCCGTGCTG
TGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAG
AAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTTGGGTTT
GGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGGATAGTGAGGATGA
GGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGATGAGA
GGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAG
GACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGCAATGAGTCCTCTC
GGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCG
CGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACC
GGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCA
AGCGCCAGGCGATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGAAGGTG
GAAGCGCCATAAAACACGGCTCTCTCCGCTGCATGTCCCTCGGCTTCCTT
TTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAAAAAGACAGC
CATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAACTGATTACT
TGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATTGCTCTTGCG
GAGCAGCTCTTGACGCTTTGTACGATCGATGCTTCCTCTGCAACTGGAAT
GCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGGCGGTAGCAA
CGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACGAGGATTCCG
ATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTCCGTGCTGTGG
GGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTCTGGCAGAAG
AGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTTGGGTTTGGG
GAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGGATAGTGAGGATGAGGA
TGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGGATGAGAGGC
CGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGGTTCGAGGAC
TTTTCGAAGACGTTGATTGCGGAGATTGAGGGGCAATGAGTCCTCTCGGG
CAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCGCGC
TCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGC
CCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGC
GCCAGGCGATGCCTCTCGACGGGGTGAAGAATGTTGTGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016226 | iron-sulfur cluster assembly |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051539 | 4 iron, 4 sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR028600 |
| DBxref | InterPro:IPR019591 |
| DBxref | InterPro:IPR033756 |
| DBxref | PFAM:PF10609 |
| DBxref | PFAM:PF01656 |
| Product | cytosolic Fe-S cluster assembly factor cfd1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1366276..1367480 - |
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