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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1583044..1584367- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006411-T1 ID=CBS51388_006411-T1|Name=CBS51388_006411-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1324bp|location=Sequence derived from alignment at An09:1583044..1584367- (Aspergillus niger CBS 513.88)
ATGTCTACGTCTGAAAATGGGTCACCTCGGGTTCTACGTGTCCCCAGGTC
TGATGAGCCCGACAGTTATGTGCTTCTCCATGTCACACGTACCAGTTCAG
CTGCATTAGACTTGAATCTCGCTGCAACGGAAGGAGAATTTCCGTATAAA
GGGGTCGGTATGGAGAATCCATAATGCTGTTCCCTTTACCTGTTCCTTCT
TGAAGTATTGTGATATACTAAGTCACAATAGTGCAACAGTCTCGTGCGCA
GACTCATCGTTCAAAGAGTTATCAGGGAACCGATGAGGACTGGGACCTTA
TCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAATACAGATAAATCAGAG
CTGCTATCTGGTGTCGAACTATCCGCTAGTATTAAGGCATTAGGTAGGCA
GAGCAATCAACTGGTCCTCACTATTCGCCGAAGGATCCAAACTATAACTG
TAAGCCTGACCACCAAATAATATAATGATGTGGTGCTGATGATTCACAGC
AAAGACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAAGATATTCAG
CTCTTCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATATGCTTGAGCA
GCGGCTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACAATACCATCA
AGCAGCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAATGCCGCCAT
GAGGAACAGCTTATGACAAACTTTACTCAGGTTCTAAATCAGAAGAAGCT
CAAAATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAATTGATGTGG
ACGATGGTAAGGTCGCATGTCTGAGTTAAAACAACAATAGCTGATACTGG
AATGATAAAAATGTAGCTGGTCAATGTCGGGCTGCCTCATCAAAAGTTGG
GGCCCGTGTCGGGAGCATGAAGCATGCGAAACGTCCTATTGTGGAAACGA
GCGATGACGAGGCTGAAAGCGATAATGGCTCGGAGAGTTTGGATCAGACC
AAGCATCAATCCAGTCCAAGAAGAATGATAGACACGGATGACGAACCAAA
TTCGACTCCGCAGCCATTGGAGGATGTGGGTGTAGATGATACCACTGACG
AAGATTTGCCCACAGCGTCCGGCGTCGATCAGGGAATAAGTGAACAGAAC
AATATGGAAGAAGCTCACCATCCACCTAGGCTGCAAGAACAGTCACCTCC
ACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCAAAATCAAGCAAAGACA
CCGTACAGAATATACAGCATCAGCACGACACTGCCGAAGAAACTGCAGGC
GAGACAGACGACGATGAGCTATGA back to topCoding sequence (CDS) from alignment at An09:1583044..1584367- >CBS51388_006411-T1 ID=CBS51388_006411-T1|Name=CBS51388_006411-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4560bp|location=Sequence derived from alignment at An09:1583044..1584367- (Aspergillus niger CBS 513.88)
CTGGTCAATGTCGGGCTGCCTCATCAAAAGTTGGGGCCCGTGTCGGGAGC
ATGAAGCATGCGAAACGTCCTATTGTGGAAACGAGCGATGACGAGGCTGA
AAGCGATAATGGCTCGGAGAGTTTGGATCAGACCAAGCATCAATCCAGTC
CAAGAAGAATGATAGACACGGATGACGAACCAAATTCGACTCCGCAGCCA
TTGGAGGATGTGGGTGTAGATGATACCACTGACGAAGATTTGCCCACAGC
GTCCGGCGTCGATCAGGGAATAAGTGAACAGAACAATATGGAAGAAGCTC
ACCATCCACCTAGGCTGCAAGAACAGTCACCTCCACCCCGCAGGGAGCTT
CCATTCGCCAAAGGGTCAAAATCAAGCAAAGACACCGTACAGAATATACA
GCATCAGCACGACACTGCCGAAGAAACTGCAGGCGAGACAGACGACGATG
AGCTATGACAAAGACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAA
GATATTCAGCTCTTCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATAT
GCTTGAGCAGCGGCTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACA
ATACCATCAAGCAGCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAA
TGCCGCCATGAGGAACAGCTTATGACAAACTTTACTCAGGTTCTAAATCA
GAAGAAGCTCAAAATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAA
TTGATGTGGACGATGTGCAACAGTCTCGTGCGCAGACTCATCGTTCAAAG
AGTTATCAGGGAACCGATGAGGACTGGGACCTTATCTTGCTGCGTGCCTT
GGGCCAGCTAGAGATCAATACAGATAAATCAGAGCTGCTATCTGGTGTCG
AACTATCCGCTAGTATTAAGGCATTAGGTAGGCAGAGCAATCAACTGGTC
CTCACTATTCGCCGAAGGATCCAAACTATAACTATGTCTACGTCTGAAAA
TGGGTCACCTCGGGTTCTACGTGTCCCCAGGTCTGATGAGCCCGACAGTT
ATGTGCTTCTCCATGTCACACGTACCAGTTCAGCTGCATTAGACTTGAAT
CTCGCTGCAACGGAAGGAGAATTTCCGTATAAAGGGGTCGCTGGTCAATG
TCGGGCTGCCTCATCAAAAGTTGGGGCCCGTGTCGGGAGCATGAAGCATG
CGAAACGTCCTATTGTGGAAACGAGCGATGACGAGGCTGAAAGCGATAAT
GGCTCGGAGAGTTTGGATCAGACCAAGCATCAATCCAGTCCAAGAAGAAT
GATAGACACGGATGACGAACCAAATTCGACTCCGCAGCCATTGGAGGATG
TGGGTGTAGATGATACCACTGACGAAGATTTGCCCACAGCGTCCGGCGTC
GATCAGGGAATAAGTGAACAGAACAATATGGAAGAAGCTCACCATCCACC
TAGGCTGCAAGAACAGTCACCTCCACCCCGCAGGGAGCTTCCATTCGCCA
AAGGGTCAAAATCAAGCAAAGACACCGTACAGAATATACAGCATCAGCAC
GACACTGCCGAAGAAACTGCAGGCGAGACAGACGACGATGAGCTATGACA
AAGACTCGGTTCTATAGCGCTCAAGCAGGATGATGAACAAGATATTCAGC
TCTTCGACTGGTCCGCCGTCGCCATTGCCAGAGCTGATATGCTTGAGCAG
CGGCTATCAAGATTGCAACAGCAGTATCGCGCAGCCGACAATACCATCAA
GCAGCTCAATAAGCAAATTGAGGACTTCATCACTGCAAAATGCCGCCATG
AGGAACAGCTTATGACAAACTTTACTCAGGTTCTAAATCAGAAGAAGCTC
AAAATCCGCAATCAACAACGCTTGTTGGCTTCGGCGAAAATTGATGTGGA
CGATGTGCAACAGTCTCGTGCGCAGACTCATCGTTCAAAGAGTTATCAGG
GAACCGATGAGGACTGGGACCTTATCTTGCTGCGTGCCTTGGGCCAGCTA
GAGATCAATACAGATAAATCAGAGCTGCTATCTGGTGTCGAACTATCCGC
TAGTATTAAGGCATTAGGTAGGCAGAGCAATCAACTGGTCCTCACTATTC
GCCGAAGGATCCAAACTATAACTATGTCTACGTCTGAAAATGGGTCACCT
CGGGTTCTACGTGTCCCCAGGTCTGATGAGCCCGACAGTTATGTGCTTCT
CCATGTCACACGTACCAGTTCAGCTGCATTAGACTTGAATCTCGCTGCAA
CGGAAGGAGAATTTCCGTATAAAGGGGTCGCTGGTCAATGTCGGGCTGCC
TCATCAAAAGTTGGGGCCCGTGTCGGGAGCATGAAGCATGCGAAACGTCC
TATTGTGGAAACGAGCGATGACGAGGCTGAAAGCGATAATGGCTCGGAGA
GTTTGGATCAGACCAAGCATCAATCCAGTCCAAGAAGAATGATAGACACG
GATGACGAACCAAATTCGACTCCGCAGCCATTGGAGGATGTGGGTGTAGA
TGATACCACTGACGAAGATTTGCCCACAGCGTCCGGCGTCGATCAGGGAA
TAAGTGAACAGAACAATATGGAAGAAGCTCACCATCCACCTAGGCTGCAA
GAACAGTCACCTCCACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCAAA
ATCAAGCAAAGACACCGTACAGAATATACAGCATCAGCACGACACTGCCG
AAGAAACTGCAGGCGAGACAGACGACGATGAGCTATGACAAAGACTCGGT
TCTATAGCGCTCAAGCAGGATGATGAACAAGATATTCAGCTCTTCGACTG
GTCCGCCGTCGCCATTGCCAGAGCTGATATGCTTGAGCAGCGGCTATCAA
GATTGCAACAGCAGTATCGCGCAGCCGACAATACCATCAAGCAGCTCAAT
AAGCAAATTGAGGACTTCATCACTGCAAAATGCCGCCATGAGGAACAGCT
TATGACAAACTTTACTCAGGTTCTAAATCAGAAGAAGCTCAAAATCCGCA
ATCAACAACGCTTGTTGGCTTCGGCGAAAATTGATGTGGACGATGTGCAA
CAGTCTCGTGCGCAGACTCATCGTTCAAAGAGTTATCAGGGAACCGATGA
GGACTGGGACCTTATCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAATA
CAGATAAATCAGAGCTGCTATCTGGTGTCGAACTATCCGCTAGTATTAAG
GCATTAGGTAGGCAGAGCAATCAACTGGTCCTCACTATTCGCCGAAGGAT
CCAAACTATAACTATGTCTACGTCTGAAAATGGGTCACCTCGGGTTCTAC
GTGTCCCCAGGTCTGATGAGCCCGACAGTTATGTGCTTCTCCATGTCACA
CGTACCAGTTCAGCTGCATTAGACTTGAATCTCGCTGCAACGGAAGGAGA
ATTTCCGTATAAAGGGGTCGCTGGTCAATGTCGGGCTGCCTCATCAAAAG
TTGGGGCCCGTGTCGGGAGCATGAAGCATGCGAAACGTCCTATTGTGGAA
ACGAGCGATGACGAGGCTGAAAGCGATAATGGCTCGGAGAGTTTGGATCA
GACCAAGCATCAATCCAGTCCAAGAAGAATGATAGACACGGATGACGAAC
CAAATTCGACTCCGCAGCCATTGGAGGATGTGGGTGTAGATGATACCACT
GACGAAGATTTGCCCACAGCGTCCGGCGTCGATCAGGGAATAAGTGAACA
GAACAATATGGAAGAAGCTCACCATCCACCTAGGCTGCAAGAACAGTCAC
CTCCACCCCGCAGGGAGCTTCCATTCGCCAAAGGGTCAAAATCAAGCAAA
GACACCGTACAGAATATACAGCATCAGCACGACACTGCCGAAGAAACTGC
AGGCGAGACAGACGACGATGAGCTATGACAAAGACTCGGTTCTATAGCGC
TCAAGCAGGATGATGAACAAGATATTCAGCTCTTCGACTGGTCCGCCGTC
GCCATTGCCAGAGCTGATATGCTTGAGCAGCGGCTATCAAGATTGCAACA
GCAGTATCGCGCAGCCGACAATACCATCAAGCAGCTCAATAAGCAAATTG
AGGACTTCATCACTGCAAAATGCCGCCATGAGGAACAGCTTATGACAAAC
TTTACTCAGGTTCTAAATCAGAAGAAGCTCAAAATCCGCAATCAACAACG
CTTGTTGGCTTCGGCGAAAATTGATGTGGACGATGTGCAACAGTCTCGTG
CGCAGACTCATCGTTCAAAGAGTTATCAGGGAACCGATGAGGACTGGGAC
CTTATCTTGCTGCGTGCCTTGGGCCAGCTAGAGATCAATACAGATAAATC
AGAGCTGCTATCTGGTGTCGAACTATCCGCTAGTATTAAGGCATTAGGTA
GGCAGAGCAATCAACTGGTCCTCACTATTCGCCGAAGGATCCAAACTATA
ACTATGTCTACGTCTGAAAATGGGTCACCTCGGGTTCTACGTGTCCCCAG
GTCTGATGAGCCCGACAGTTATGTGCTTCTCCATGTCACACGTACCAGTT
CAGCTGCATTAGACTTGAATCTCGCTGCAACGGAAGGAGAATTTCCGTAT
AAAGGGGTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006310 | DNA recombination |
| GO:0006302 | double-strand break repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010585 |
| DBxref | PFAM:PF06632 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1583044..1584367 - |
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