You are here

Home

CBS51388_006417-T1, CBS51388_006417-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006417-T1
Unique NameCBS51388_006417-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An10:10998..12174+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006417-T1 ID=CBS51388_006417-T1|Name=CBS51388_006417-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1177bp|location=Sequence derived from alignment at An10:10998..12174+ (Aspergillus niger CBS 513.88)
ATGCAGTGCTGCGACTCACAATTCGATGTCCTCGTCATCGGCGGGGGTCC
TGCCGGGCTAGCGGCTACCATGGCCCTGGGACGGGCATGCAGAACAGTGG
CTGTCTTCGACTCCCAGGAGTATCGCAATGAGGAGGCCTTACTGATGCAT
AATGTTCTGTGTCACGATGGGCAAAAGCCCAGTCTATATAGAGCTCAGGC
CGTGCAAGAGATCATGGACAAATATGACACGGTCTGCTTCTTCGATAGAG
AGATTATCAGCGCTAGTGCCCGGAAGACCGATCAAGACTACCCCCAGATT
CGAAGTCACGGACCGAACAGGTCGCACATGGATCGGACGGAAGTTGATTA
TCGCTTCTGGAATAAAAGATATTTTTCCAGACATAGAAGGATATAAGGAG
CTTTGGGGTCGTGGAATGTAAGTCATGAAGATCGCTCTGCGGTGCTGTGA
CCTAGGGAACGAATTACATGGACGGCTTGGCTAATGTGGCCTATTGTTAG
TGTTCACTGTCTTTTTTGTGACGGTTATGAGAAACGAGGTGGTCGTGTTG
GTGTTCTCGGTCAGCCTTCAATGGATGACTTGGACTCTGTTCTACTTGCC
TTTCCACTTGCCCACAATGATCTGACCATATTTACAAATGGAGCACCATA
TCTTGTTGACCCTGACGCGCGGCAACCACTCGATATTGCGATAGCCCGGG
GTGTCAATATTGATGGGCGCGCTATCAAACTCATTTCACAGATACCAGAC
GGAACAGGCGTCAAGTTATGTTTTCACGATGGAGAGGATAAGGACCTTAG
AATGCTTTTGAGCTCTCCTAAAAGCATAAACCGTGCTGCCAGTCTTGTCG
AGGAGCTCGGCCTTGAGACTCAGCCACGGTCGAGGGGACTTGTGGTGTCC
AAGTCTTCCATGGGCGAGAGCAGCCTTCGCGGATGTTTCGTGGCTGGTGA
TGCGTCTTCCTCTGTGCCTAAGATCGTTCCAACTGCCTTGGCGTCTAGTA
TGTAGAGACTAGCACTGTCGTGAAATATCTACCTTTTCTTTTTGCCTTCC
TACTAATTTACGATTGGATTCGCCTATTATAGGATCTCTTGCCGGAATAG
GAGCTGCAAAACAGCTGGCTTATGACGATGCGCTTGAAGCATTTCAGAAG
ATGGCACCTACAGGAGACAGACCGTGA
back to top

Coding sequence (CDS) from alignment at An10:10998..12174+

>CBS51388_006417-T1 ID=CBS51388_006417-T1|Name=CBS51388_006417-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3732bp|location=Sequence derived from alignment at An10:10998..12174+ (Aspergillus niger CBS 513.88)
ATGCAGTGCTGCGACTCACAATTCGATGTCCTCGTCATCGGCGGGGGTCC
TGCCGGGCTAGCGGCTACCATGGCCCTGGGACGGGCATGCAGAACAGTGG
CTGTCTTCGACTCCCAGGAGTATCGCAATGAGGAGGCCTTACTGATGCAT
AATGTTCTGTGTCACGATGGGCAAAAGCCCAGTCTATATAGAGCTCAGGC
CGTGCAAGAGATCATGGACAAATATGACACGGTCTGCTTCTTCGATAGAG
AGATTATCAGCGCTAGTGCCCGGAAGACCGATCAAGACTACCCCCAGATT
CGAAACATAGAAGGATATAAGGAGCTTTGGGGTCGTGGAATTGTTCACTG
TCTTTTTTGTGACGGTTATGAGAAACGAGGTGGTCGTGTTGGTGTTCTCG
GTCAGCCTTCAATGGATGACTTGGACTCTGTTCTACTTGCCTTTCCACTT
GCCCACAATGATCTGACCATATTTACAAATGGAGCACCATATCTTGTTGA
CCCTGACGCGCGGCAACCACTCGATATTGCGATAGCCCGGGGTGTCAATA
TTGATGGGCGCGCTATCAAACTCATTTCACAGATACCAGACGGAACAGGC
GTCAAGTTATGTTTTCACGATGGAGAGGATAAGGACCTTAGAATGCTTTT
GAGCTCTCCTAAAAGCATAAACCGTGCTGCCAGTCTTGTCGAGGAGCTCG
GCCTTGAGACTCAGCCACGGTCGAGGGGACTTGTGGTGTCCAAGTCTTCC
ATGGGCGAGAGCAGCCTTCGCGGATGTTTCGTGGCTGGTGATGCGTCTTC
CTCTGTGCCTAAGATCGTTCCAACTGCCTTGGCGTCTAGATCTCTTGCCG
GAATAGGAGCTGCAAAACAGCTGGCTTATGACGATGCGCTTGAAGCATTT
CAGAAGATGGCACCTACAGGAGACAGACCGTGAATGCAGTGCTGCGACTC
ACAATTCGATGTCCTCGTCATCGGCGGGGGTCCTGCCGGGCTAGCGGCTA
CCATGGCCCTGGGACGGGCATGCAGAACAGTGGCTGTCTTCGACTCCCAG
GAGTATCGCAATGAGGAGGCCTTACTGATGCATAATGTTCTGTGTCACGA
TGGGCAAAAGCCCAGTCTATATAGAGCTCAGGCCGTGCAAGAGATCATGG
ACAAATATGACACGGTCTGCTTCTTCGATAGAGAGATTATCAGCGCTAGT
GCCCGGAAGACCGATCAAGACTACCCCCAGATTCGAAACATAGAAGGATA
TAAGGAGCTTTGGGGTCGTGGAATTGTTCACTGTCTTTTTTGTGACGGTT
ATGAGAAACGAGGTGGTCGTGTTGGTGTTCTCGGTCAGCCTTCAATGGAT
GACTTGGACTCTGTTCTACTTGCCTTTCCACTTGCCCACAATGATCTGAC
CATATTTACAAATGGAGCACCATATCTTGTTGACCCTGACGCGCGGCAAC
CACTCGATATTGCGATAGCCCGGGGTGTCAATATTGATGGGCGCGCTATC
AAACTCATTTCACAGATACCAGACGGAACAGGCGTCAAGTTATGTTTTCA
CGATGGAGAGGATAAGGACCTTAGAATGCTTTTGAGCTCTCCTAAAAGCA
TAAACCGTGCTGCCAGTCTTGTCGAGGAGCTCGGCCTTGAGACTCAGCCA
CGGTCGAGGGGACTTGTGGTGTCCAAGTCTTCCATGGGCGAGAGCAGCCT
TCGCGGATGTTTCGTGGCTGGTGATGCGTCTTCCTCTGTGCCTAAGATCG
TTCCAACTGCCTTGGCGTCTAGATCTCTTGCCGGAATAGGAGCTGCAAAA
CAGCTGGCTTATGACGATGCGCTTGAAGCATTTCAGAAGATGGCACCTAC
AGGAGACAGACCGTGAATGCAGTGCTGCGACTCACAATTCGATGTCCTCG
TCATCGGCGGGGGTCCTGCCGGGCTAGCGGCTACCATGGCCCTGGGACGG
GCATGCAGAACAGTGGCTGTCTTCGACTCCCAGGAGTATCGCAATGAGGA
GGCCTTACTGATGCATAATGTTCTGTGTCACGATGGGCAAAAGCCCAGTC
TATATAGAGCTCAGGCCGTGCAAGAGATCATGGACAAATATGACACGGTC
TGCTTCTTCGATAGAGAGATTATCAGCGCTAGTGCCCGGAAGACCGATCA
AGACTACCCCCAGATTCGAAACATAGAAGGATATAAGGAGCTTTGGGGTC
GTGGAATTGTTCACTGTCTTTTTTGTGACGGTTATGAGAAACGAGGTGGT
CGTGTTGGTGTTCTCGGTCAGCCTTCAATGGATGACTTGGACTCTGTTCT
ACTTGCCTTTCCACTTGCCCACAATGATCTGACCATATTTACAAATGGAG
CACCATATCTTGTTGACCCTGACGCGCGGCAACCACTCGATATTGCGATA
GCCCGGGGTGTCAATATTGATGGGCGCGCTATCAAACTCATTTCACAGAT
ACCAGACGGAACAGGCGTCAAGTTATGTTTTCACGATGGAGAGGATAAGG
ACCTTAGAATGCTTTTGAGCTCTCCTAAAAGCATAAACCGTGCTGCCAGT
CTTGTCGAGGAGCTCGGCCTTGAGACTCAGCCACGGTCGAGGGGACTTGT
GGTGTCCAAGTCTTCCATGGGCGAGAGCAGCCTTCGCGGATGTTTCGTGG
CTGGTGATGCGTCTTCCTCTGTGCCTAAGATCGTTCCAACTGCCTTGGCG
TCTAGATCTCTTGCCGGAATAGGAGCTGCAAAACAGCTGGCTTATGACGA
TGCGCTTGAAGCATTTCAGAAGATGGCACCTACAGGAGACAGACCGTGAA
TGCAGTGCTGCGACTCACAATTCGATGTCCTCGTCATCGGCGGGGGTCCT
GCCGGGCTAGCGGCTACCATGGCCCTGGGACGGGCATGCAGAACAGTGGC
TGTCTTCGACTCCCAGGAGTATCGCAATGAGGAGGCCTTACTGATGCATA
ATGTTCTGTGTCACGATGGGCAAAAGCCCAGTCTATATAGAGCTCAGGCC
GTGCAAGAGATCATGGACAAATATGACACGGTCTGCTTCTTCGATAGAGA
GATTATCAGCGCTAGTGCCCGGAAGACCGATCAAGACTACCCCCAGATTC
GAAACATAGAAGGATATAAGGAGCTTTGGGGTCGTGGAATTGTTCACTGT
CTTTTTTGTGACGGTTATGAGAAACGAGGTGGTCGTGTTGGTGTTCTCGG
TCAGCCTTCAATGGATGACTTGGACTCTGTTCTACTTGCCTTTCCACTTG
CCCACAATGATCTGACCATATTTACAAATGGAGCACCATATCTTGTTGAC
CCTGACGCGCGGCAACCACTCGATATTGCGATAGCCCGGGGTGTCAATAT
TGATGGGCGCGCTATCAAACTCATTTCACAGATACCAGACGGAACAGGCG
TCAAGTTATGTTTTCACGATGGAGAGGATAAGGACCTTAGAATGCTTTTG
AGCTCTCCTAAAAGCATAAACCGTGCTGCCAGTCTTGTCGAGGAGCTCGG
CCTTGAGACTCAGCCACGGTCGAGGGGACTTGTGGTGTCCAAGTCTTCCA
TGGGCGAGAGCAGCCTTCGCGGATGTTTCGTGGCTGGTGATGCGTCTTCC
TCTGTGCCTAAGATCGTTCCAACTGCCTTGGCGTCTAGATCTCTTGCCGG
AATAGGAGCTGCAAAACAGCTGGCTTATGACGATGCGCTTGAAGCATTTC
AGAAGATGGCACCTACAGGAGACAGACCGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006417CBS51388_006417Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006417-T1.exon1CBS51388_006417-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006417-T1.exon2CBS51388_006417-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006417-T1.exon3CBS51388_006417-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006417-T1.exon4CBS51388_006417-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006417-T1.cdsCBS51388_006417-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006417-T1CBS51388_006417-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10.1
NoteSMCOG1176:alkyl hydroperoxide reductase subunit
DBxrefInterPro:IPR003953
DBxrefInterPro:IPR036188
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An10supercontigAn10:10998..12174 +
Powered by Drupal