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CBS51388_006496-T1, CBS51388_006496-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006496-T1
Unique NameCBS51388_006496-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An10:256024..257036-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006496-T1 ID=CBS51388_006496-T1|Name=CBS51388_006496-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1013bp|location=Sequence derived from alignment at An10:256024..257036- (Aspergillus niger CBS 513.88)
ATGGCCATCCCAACTAAAGTCACTATCATCGGGGTATGTCGCTCGTGTCT
ACTTTCCTTTCGAACAACCAATTAACCAACGCAGGCGACCGGATTGATCG
GTCAAATCATCCTCAAAGCATTGAGCTCGGATGCAAACATCACCGTTACC
GTCCTGTCCCGCGAGGAATCATCGAACACCATTGAATTTCCAACAGGCGT
TATTGTCCATAAGACCGACTTTTCACCCTCCAGCCTTGAGTCTCTTCTTC
GTGGTCAAGATGTGCTCATCTCCGCAGTTGGTGGGACGGCCTTTACTGAG
CAAAAGAAGTTCATCGATGCTGCTATCGAGGCAGGCGTGAAGCGATTCAT
TCCATCCGAGTTCTCGACCAGCAGTGAAGACGATGCTGTCATCCAGCTAC
TCCCTCTGTTCCAGCAGAAGAGAGATATAATCAATTACCTGAAGGCGAAA
GAGGAAAAGGGGTTGAGTTGGACTGCGATTGCTACGTCCGGGTTGTTTGA
CTGGGTGAGCAGTTTTCTCTTACCACAAACCTGATACGTTATGACTGATT
GATATGTTAGGGTCTCGAATCTGGATTCCTTGGCTTTGACATCAAGACCA
AATCGGCAGTGATCTGGGACGGCGGTGCCACATCGTTTACCTTGACGAAT
GAGAAACAGCTCGGCAAGGCGGTTTTATCGGTCGTCTTGCGGCCGGAAGA
GACGAAGAATCGCTTTCTATATATTGCGTCTGTTGAGACTACCCAGAACG
AAGTCTTGAAGACGCTCGAGGATATTACAGGCTCACAGTGGACAGTGACG
GAGACTACGACGGAGGAGCAGGTTGCTGAAGGGCGTGAGAAGCTGGGGGC
GGGTGATTTCAGTGGTGCGTTTGCGCTGGTTCGAGCAACTGCTTTTGGAA
GTTCCACTGGCTTGAAGACGAATTACGTCAAGGATCAGAAACTCGCGAAT
GGATTGTTGGGGCTGGAGACGGAGAGTGTGAGGGAGACTGTTGAGCGGGT
GGTTGGAGCGTAG
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Coding sequence (CDS) from alignment at An10:256024..257036-

>CBS51388_006496-T1 ID=CBS51388_006496-T1|Name=CBS51388_006496-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2718bp|location=Sequence derived from alignment at An10:256024..257036- (Aspergillus niger CBS 513.88)
GGTCTCGAATCTGGATTCCTTGGCTTTGACATCAAGACCAAATCGGCAGT
GATCTGGGACGGCGGTGCCACATCGTTTACCTTGACGAATGAGAAACAGC
TCGGCAAGGCGGTTTTATCGGTCGTCTTGCGGCCGGAAGAGACGAAGAAT
CGCTTTCTATATATTGCGTCTGTTGAGACTACCCAGAACGAAGTCTTGAA
GACGCTCGAGGATATTACAGGCTCACAGTGGACAGTGACGGAGACTACGA
CGGAGGAGCAGGTTGCTGAAGGGCGTGAGAAGCTGGGGGCGGGTGATTTC
AGTGGTGCGTTTGCGCTGGTTCGAGCAACTGCTTTTGGAAGTTCCACTGG
CTTGAAGACGAATTACGTCAAGGATCAGAAACTCGCGAATGGATTGTTGG
GGCTGGAGACGGAGAGTGTGAGGGAGACTGTTGAGCGGGTGGTTGGAGCG
TAGGCGACCGGATTGATCGGTCAAATCATCCTCAAAGCATTGAGCTCGGA
TGCAAACATCACCGTTACCGTCCTGTCCCGCGAGGAATCATCGAACACCA
TTGAATTTCCAACAGGCGTTATTGTCCATAAGACCGACTTTTCACCCTCC
AGCCTTGAGTCTCTTCTTCGTGGTCAAGATGTGCTCATCTCCGCAGTTGG
TGGGACGGCCTTTACTGAGCAAAAGAAGTTCATCGATGCTGCTATCGAGG
CAGGCGTGAAGCGATTCATTCCATCCGAGTTCTCGACCAGCAGTGAAGAC
GATGCTGTCATCCAGCTACTCCCTCTGTTCCAGCAGAAGAGAGATATAAT
CAATTACCTGAAGGCGAAAGAGGAAAAGGGGTTGAGTTGGACTGCGATTG
CTACGTCCGGGTTGTTTGACTGGATGGCCATCCCAACTAAAGTCACTATC
ATCGGGGGTCTCGAATCTGGATTCCTTGGCTTTGACATCAAGACCAAATC
GGCAGTGATCTGGGACGGCGGTGCCACATCGTTTACCTTGACGAATGAGA
AACAGCTCGGCAAGGCGGTTTTATCGGTCGTCTTGCGGCCGGAAGAGACG
AAGAATCGCTTTCTATATATTGCGTCTGTTGAGACTACCCAGAACGAAGT
CTTGAAGACGCTCGAGGATATTACAGGCTCACAGTGGACAGTGACGGAGA
CTACGACGGAGGAGCAGGTTGCTGAAGGGCGTGAGAAGCTGGGGGCGGGT
GATTTCAGTGGTGCGTTTGCGCTGGTTCGAGCAACTGCTTTTGGAAGTTC
CACTGGCTTGAAGACGAATTACGTCAAGGATCAGAAACTCGCGAATGGAT
TGTTGGGGCTGGAGACGGAGAGTGTGAGGGAGACTGTTGAGCGGGTGGTT
GGAGCGTAGGCGACCGGATTGATCGGTCAAATCATCCTCAAAGCATTGAG
CTCGGATGCAAACATCACCGTTACCGTCCTGTCCCGCGAGGAATCATCGA
ACACCATTGAATTTCCAACAGGCGTTATTGTCCATAAGACCGACTTTTCA
CCCTCCAGCCTTGAGTCTCTTCTTCGTGGTCAAGATGTGCTCATCTCCGC
AGTTGGTGGGACGGCCTTTACTGAGCAAAAGAAGTTCATCGATGCTGCTA
TCGAGGCAGGCGTGAAGCGATTCATTCCATCCGAGTTCTCGACCAGCAGT
GAAGACGATGCTGTCATCCAGCTACTCCCTCTGTTCCAGCAGAAGAGAGA
TATAATCAATTACCTGAAGGCGAAAGAGGAAAAGGGGTTGAGTTGGACTG
CGATTGCTACGTCCGGGTTGTTTGACTGGATGGCCATCCCAACTAAAGTC
ACTATCATCGGGGGTCTCGAATCTGGATTCCTTGGCTTTGACATCAAGAC
CAAATCGGCAGTGATCTGGGACGGCGGTGCCACATCGTTTACCTTGACGA
ATGAGAAACAGCTCGGCAAGGCGGTTTTATCGGTCGTCTTGCGGCCGGAA
GAGACGAAGAATCGCTTTCTATATATTGCGTCTGTTGAGACTACCCAGAA
CGAAGTCTTGAAGACGCTCGAGGATATTACAGGCTCACAGTGGACAGTGA
CGGAGACTACGACGGAGGAGCAGGTTGCTGAAGGGCGTGAGAAGCTGGGG
GCGGGTGATTTCAGTGGTGCGTTTGCGCTGGTTCGAGCAACTGCTTTTGG
AAGTTCCACTGGCTTGAAGACGAATTACGTCAAGGATCAGAAACTCGCGA
ATGGATTGTTGGGGCTGGAGACGGAGAGTGTGAGGGAGACTGTTGAGCGG
GTGGTTGGAGCGTAGGCGACCGGATTGATCGGTCAAATCATCCTCAAAGC
ATTGAGCTCGGATGCAAACATCACCGTTACCGTCCTGTCCCGCGAGGAAT
CATCGAACACCATTGAATTTCCAACAGGCGTTATTGTCCATAAGACCGAC
TTTTCACCCTCCAGCCTTGAGTCTCTTCTTCGTGGTCAAGATGTGCTCAT
CTCCGCAGTTGGTGGGACGGCCTTTACTGAGCAAAAGAAGTTCATCGATG
CTGCTATCGAGGCAGGCGTGAAGCGATTCATTCCATCCGAGTTCTCGACC
AGCAGTGAAGACGATGCTGTCATCCAGCTACTCCCTCTGTTCCAGCAGAA
GAGAGATATAATCAATTACCTGAAGGCGAAAGAGGAAAAGGGGTTGAGTT
GGACTGCGATTGCTACGTCCGGGTTGTTTGACTGGATGGCCATCCCAACT
AAAGTCACTATCATCGGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006496CBS51388_006496Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006496-T1CBS51388_006496-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006496-T1.cdsCBS51388_006496-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006496-T1.exon3CBS51388_006496-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006496-T1.exon2CBS51388_006496-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006496-T1.exon1CBS51388_006496-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF01118
DBxrefPFAM:PF03435
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An10supercontigAn10:256024..257036 -
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