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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:197181..197894+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006570-T1 ID=CBS51388_006570-T1|Name=CBS51388_006570-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=714bp|location=Sequence derived from alignment at An11:197181..197894+ (Aspergillus niger CBS 513.88)
ATGCCTCCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAA
CCAGGCGACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAG
CAGCGCCATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGAT
ACTACTCGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACA
GGCCTCTGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTG
CCGTAAGGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAG
GATGCTAAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAA
GAAGGAAGAAGCAAAGAGACAAGGGCCCAGAGGTGAGTGACACGCCCCAG
TCAGGCATCTCCTGTGACAAGTACGCTGATCATCTCCACTAGTTCACCAG
GAGGGCCTCGAGCTACGAGAGAAGATTCTGCGCAACTTCGACCTCTCAAG
CCAGTACGGGGTAGGTCTGACTCTATTCATATACCTCATGTTCTTTTGAG
CTGACCTTATATTGGTGTAGCCTTGCATTGGAATTGCTCGACTGAAGCGG
TGGAGACGTGCGCATATGCTGGGCCTCAATCCTCCCATTGAGGTGTTGGC
CGTGTTGTTGAAACCGGACGATACCACTAAACAGAGAGCGTATATTGACG
AGTTGATGTCTTGA back to topCoding sequence (CDS) from alignment at An11:197181..197894+ >CBS51388_006570-T1 ID=CBS51388_006570-T1|Name=CBS51388_006570-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1782bp|location=Sequence derived from alignment at An11:197181..197894+ (Aspergillus niger CBS 513.88)
ATGCCTCCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAA
CCAGGCGACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAG
CAGCGCCATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGAT
ACTACTCGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACA
GGCCTCTGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTG
CCGTAAGGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAG
GATGCTAAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAA
GAAGGAAGAAGCAAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCG
AGCTACGAGAGAAGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGG
CCTTGCATTGGAATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCT
GGGCCTCAATCCTCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACG
ATACCACTAAACAGAGAGCGTATATTGACGAGTTGATGTCTTGAATGCCT
CCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAACCAGGC
GACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAGCAGCGC
CATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGATACTACT
CGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACAGGCCTC
TGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTGCCGTAA
GGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAGGATGCT
AAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAAGAAGGA
AGAAGCAAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCGAGCTAC
GAGAGAAGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGGCCTTGC
ATTGGAATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCTGGGCCT
CAATCCTCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACGATACCA
CTAAACAGAGAGCGTATATTGACGAGTTGATGTCTTGAATGCCTCCCTCT
CGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAACCAGGCGACCTT
ATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAGCAGCGCCATCTA
CACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGATACTACTCGATCG
AGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACAGGCCTCTGTTAC
TCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTGCCGTAAGGAAGC
AGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAGGATGCTAAGGCG
GAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAAGAAGGAAGAAGC
AAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCGAGCTACGAGAGA
AGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGGCCTTGCATTGGA
ATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCTGGGCCTCAATCC
TCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACGATACCACTAAAC
AGAGAGCGTATATTGACGAGTTGATGTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007218 |
| DBxref | PFAM:PF04081 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:197181..197894 + |
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