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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:398633..399692+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006641-T1 ID=CBS51388_006641-T1|Name=CBS51388_006641-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1060bp|location=Sequence derived from alignment at An11:398633..399692+ (Aspergillus niger CBS 513.88)
ATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCAT
CAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCC
AGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTC
GCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTT
CCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTG
GTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGAC
CTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTTCGTCCTCCAT
ATAATTCTCCACATAGTTCGCCAGATGGGTCAACATACTAACTCTCCATA
GGTGGTGGTGCCTGGCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCG
TCGTCCCGCCGAGGTCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAG
ACCTAGCGAACCCCAACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACC
TCGACCCTGTTGTCCAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAA
CGCCACCAGCGTGGAGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACC
CCAAGGAAGTCCGCATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACA
CTCCACCACGACGACCACTCCTGCATGGACCCTAACACCATCAACGCTCC
CGTGATCATCAGTACCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGG
CCAAGAGACTCGTCTCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGC
GGCTTGGACATGAACTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGA
GGTCACCAAGGGTTTGATCATCGGTGGTATGGAGCTGTCGGAGATCGATG
GCTTCAACCGCATGGGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTC
AAGGCTGCCGAGGAGGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTG
CGCTGAGTAA back to topCoding sequence (CDS) from alignment at An11:398633..399692+ >CBS51388_006641-T1 ID=CBS51388_006641-T1|Name=CBS51388_006641-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1992bp|location=Sequence derived from alignment at An11:398633..399692+ (Aspergillus niger CBS 513.88)
ATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCAT
CAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCC
AGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTC
GCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTT
CCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTG
GTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGAC
CTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTGGTGGTGCCTG
GCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTCCCGCCGAGG
TCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTAGCGAACCCC
AACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGACCCTGTTGTC
CAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCACCAGCGTGG
AGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAGGAAGTCCGC
ATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCACCACGACGA
CCACTCCTGCATGGACCCTAACACCATCAACGCTCCCGTGATCATCAGTA
CCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAGAGACTCGTC
TCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTTGGACATGAA
CTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCACCAAGGGTT
TGATCATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTCAACCGCATG
GGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGCTGCCGAGGA
GGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTGAGTAAATGT
CTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACTGGCATCAAG
TCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCCAGAC
CCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCAAGTTCGCTC
CCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGCTACTTCCAG
GATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGGTGCTGGTTC
CTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCCCGGACCTGA
AGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTGGTGGTGCCTGGCTT
GGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTCCCGCCGAGGTCTT
CCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTAGCGAACCCCAACT
ACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGACCCTGTTGTCCAAG
GTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCACCAGCGTGGAGGA
CCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAGGAAGTCCGCATTG
CCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCACCACGACGACCAC
TCCTGCATGGACCCTAACACCATCAACGCTCCCGTGATCATCAGTACCAC
CGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAGAGACTCGTCTCCA
TGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTTGGACATGAACTCG
GCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCACCAAGGGTTTGAT
CATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTCAACCGCATGGGTC
CTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGCTGCCGAGGAGGCG
CTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009228 | thiamine biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027495 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002922 |
| DBxref | PFAM:PF01946 |
| DBxref | PFAM:PF13450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:398633..399692 + |
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