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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:498330..500217- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006669-T1 ID=CBS51388_006669-T1|Name=CBS51388_006669-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1888bp|location=Sequence derived from alignment at An11:498330..500217- (Aspergillus niger CBS 513.88)
ATGGGTGTCTCTCCGTCTGGCAATCATCATCGACGGCGGAGCTCAGTACT
GGCGGGCGCTTCACAGTCAGCTCCAATCGAGCATCGAGACGATATACCAA
GGGTCATTGGGGACGCTGCCGGCTCAAAACGAGAGGAGCCCAAGTCCTCG
CCGGCTGAGGACGCAGACATCTCGGACCTATCCTCGATCGCAGAGAGCTT
GGAGATGGATTATATCAGCTCAGACGACGACCTCCATGATGACGAAGAAA
CGGGCCTCACAGCGAAGCAGAGACGCCAGAGGCGCCGCAGAAGGCAGCAG
CGGCGACAGTTGGATGCCCGTATCGCCGACGTCAAGGCCTCGAAGCACGA
TACATTACCGTTGGGGTTCACAGATAGTGATGTCTTCAGGAGGCTGTCCA
TTAATGCGGGATTGATCCTGCTGTGGTATTTCTTTTCGCTGTCGATTTCA
ATTGTGAGTTTTTCTGGTGCGTGTATTCCGTGGCTCACATGCTAACCCCC
GTCGGTGCTGGTAGTACAACAAGTGGATGTTCTCCGATGACGATGTTGTC
TTTCCTTTCCCCCTCTTCACCACGAGCTTGCATATGGCCGTTCAGTTCAC
CTTCTCGTCGATACTCCTCTATTTGATACCCTCCCTGCGTCCGAAAGCGC
CCGCTGCATCCACACCTACAGGTTCGCCCGTGAGCGAGCATGATCCCTTT
GAGTCCCGACCGGTGGTCACCCGGTTCTTCTACCTTACACGTCTCGTCCC
CTGCGGTGTGGCGACTTCCCTCGATATTGGACTGGGAAACATGTCCCTGA
AGTTCATTTCCCTTACCTTCCTCACCATGTGCAAATCATCCGCCTTAGCA
TTCGTCCTTCTCTTTGCCTTCGTTTTCCGCCTCGAAACCCCATCCGTCAA
GTTGATCGTGATCATTGCTACGATGACCGTGGGTGTTGTCATGATGGTCG
CCGGCGAGACCGCTTTCAATGCGGTTGGATTTATCCTCGTCATTGCATCG
GCGTTCTTTTCGGGCTTCCGATGGGGCCTCACCCAGATTCTCCTCCTACG
CCATCCCGCGACGGCGAACCCGTTCTCCACCCTCTTCTTCCTTACGCCTG
TGATGTTTGTCTCACTGATTGTCATTGCGCTGGCGGTAGAGGGGCCGTTG
GAGATCATCGCTGGCTTCCAAGCCCTGGCGGCTGCCCGCGGGGGCCTGTT
TGCTGTTTTCCTGCTGATCTTCCCTGGTATCCTGGCTTTCTGCATGATTT
CCTCTGAGTTTGCGCTCCTCAAGCGCTCTTCGGTAGTGACGCTGAKCATT
TGCGGCATCTTCAAGGAAGTCGTCACCATCASTGCTGCTGGGGTCATCTT
CCACGATCAGCTCACTGCAGTCAACATTACGGGCTTGGTGGTCACCATTG
GCAGCATCGCGTCCTACAACTACATGAAGATCTCTAAAATGCGCTCAGAA
GCCCAGAAGGGCGCGTGGACACGCAGTCCCAATCTGGACTCTGAGGACGA
CTCCGATCCGACTGGGGAGCGCGGAGAGTACCGACGGATCCGTAACCCTG
AAACGAGCACTTTCCAATCTCCGGGTATCCATGTCGACGAGGACAATGTG
AATATCACTCCTGAGGATGACTTGACCGCTGGCGGTCGGCGCTCATTCCG
TGTTCGTGCCAGCGGCGCTAGCAATGCGCTCGGGTTAAGCATCAACACCA
CCAATCTCGGGGACCACGATAGAAATTTCTCCCCTCGAGTGTCGGCCCCC
TCGCCCTTGAAATCGGCGCCCCCAGTCATCACGTCCCTGGAAGCTGAGCT
TAATCGATCGGCTTCTGGCCCTAGCTTCGGAAGCAAGCCCCAGACATCTC
CAGAACGGGCTTCACCGGAAGGACGCTCAGCTAGCTAG back to topCoding sequence (CDS) from alignment at An11:498330..500217- >CBS51388_006669-T1 ID=CBS51388_006669-T1|Name=CBS51388_006669-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3654bp|location=Sequence derived from alignment at An11:498330..500217- (Aspergillus niger CBS 513.88)
TACAACAAGTGGATGTTCTCCGATGACGATGTTGTCTTTCCTTTCCCCCT
CTTCACCACGAGCTTGCATATGGCCGTTCAGTTCACCTTCTCGTCGATAC
TCCTCTATTTGATACCCTCCCTGCGTCCGAAAGCGCCCGCTGCATCCACA
CCTACAGGTTCGCCCGTGAGCGAGCATGATCCCTTTGAGTCCCGACCGGT
GGTCACCCGGTTCTTCTACCTTACACGTCTCGTCCCCTGCGGTGTGGCGA
CTTCCCTCGATATTGGACTGGGAAACATGTCCCTGAAGTTCATTTCCCTT
ACCTTCCTCACCATGTGCAAATCATCCGCCTTAGCATTCGTCCTTCTCTT
TGCCTTCGTTTTCCGCCTCGAAACCCCATCCGTCAAGTTGATCGTGATCA
TTGCTACGATGACCGTGGGTGTTGTCATGATGGTCGCCGGCGAGACCGCT
TTCAATGCGGTTGGATTTATCCTCGTCATTGCATCGGCGTTCTTTTCGGG
CTTCCGATGGGGCCTCACCCAGATTCTCCTCCTACGCCATCCCGCGACGG
CGAACCCGTTCTCCACCCTCTTCTTCCTTACGCCTGTGATGTTTGTCTCA
CTGATTGTCATTGCGCTGGCGGTAGAGGGGCCGTTGGAGATCATCGCTGG
CTTCCAAGCCCTGGCGGCTGCCCGCGGGGGCCTGTTTGCTGTTTTCCTGC
TGATCTTCCCTGGTATCCTGGCTTTCTGCATGATTTCCTCTGAGTTTGCG
CTCCTCAAGCGCTCTTCGGTAGTGACGCTGAKCATTTGCGGCATCTTCAA
GGAAGTCGTCACCATCASTGCTGCTGGGGTCATCTTCCACGATCAGCTCA
CTGCAGTCAACATTACGGGCTTGGTGGTCACCATTGGCAGCATCGCGTCC
TACAACTACATGAAGATCTCTAAAATGCGCTCAGAAGCCCAGAAGGGCGC
GTGGACACGCAGTCCCAATCTGGACTCTGAGGACGACTCCGATCCGACTG
GGGAGCGCGGAGAGTACCGACGGATCCGTAACCCTGAAACGAGCACTTTC
CAATCTCCGGGTATCCATGTCGACGAGGACAATGTGAATATCACTCCTGA
GGATGACTTGACCGCTGGCGGTCGGCGCTCATTCCGTGTTCGTGCCAGCG
GCGCTAGCAATGCGCTCGGGTTAAGCATCAACACCACCAATCTCGGGGAC
CACGATAGAAATTTCTCCCCTCGAGTGTCGGCCCCCTCGCCCTTGAAATC
GGCGCCCCCAGTCATCACGTCCCTGGAAGCTGAGCTTAATCGATCGGCTT
CTGGCCCTAGCTTCGGAAGCAAGCCCCAGACATCTCCAGAACGGGCTTCA
CCGGAAGGACGCTCAGCTAGCTAGATGGGTGTCTCTCCGTCTGGCAATCA
TCATCGACGGCGGAGCTCAGTACTGGCGGGCGCTTCACAGTCAGCTCCAA
TCGAGCATCGAGACGATATACCAAGGGTCATTGGGGACGCTGCCGGCTCA
AAACGAGAGGAGCCCAAGTCCTCGCCGGCTGAGGACGCAGACATCTCGGA
CCTATCCTCGATCGCAGAGAGCTTGGAGATGGATTATATCAGCTCAGACG
ACGACCTCCATGATGACGAAGAAACGGGCCTCACAGCGAAGCAGAGACGC
CAGAGGCGCCGCAGAAGGCAGCAGCGGCGACAGTTGGATGCCCGTATCGC
CGACGTCAAGGCCTCGAAGCACGATACATTACCGTTGGGGTTCACAGATA
GTGATGTCTTCAGGAGGCTGTCCATTAATGCGGGATTGATCCTGCTGTGG
TATTTCTTTTCGCTGTCGATTTCAATTTACAACAAGTGGATGTTCTCCGA
TGACGATGTTGTCTTTCCTTTCCCCCTCTTCACCACGAGCTTGCATATGG
CCGTTCAGTTCACCTTCTCGTCGATACTCCTCTATTTGATACCCTCCCTG
CGTCCGAAAGCGCCCGCTGCATCCACACCTACAGGTTCGCCCGTGAGCGA
GCATGATCCCTTTGAGTCCCGACCGGTGGTCACCCGGTTCTTCTACCTTA
CACGTCTCGTCCCCTGCGGTGTGGCGACTTCCCTCGATATTGGACTGGGA
AACATGTCCCTGAAGTTCATTTCCCTTACCTTCCTCACCATGTGCAAATC
ATCCGCCTTAGCATTCGTCCTTCTCTTTGCCTTCGTTTTCCGCCTCGAAA
CCCCATCCGTCAAGTTGATCGTGATCATTGCTACGATGACCGTGGGTGTT
GTCATGATGGTCGCCGGCGAGACCGCTTTCAATGCGGTTGGATTTATCCT
CGTCATTGCATCGGCGTTCTTTTCGGGCTTCCGATGGGGCCTCACCCAGA
TTCTCCTCCTACGCCATCCCGCGACGGCGAACCCGTTCTCCACCCTCTTC
TTCCTTACGCCTGTGATGTTTGTCTCACTGATTGTCATTGCGCTGGCGGT
AGAGGGGCCGTTGGAGATCATCGCTGGCTTCCAAGCCCTGGCGGCTGCCC
GCGGGGGCCTGTTTGCTGTTTTCCTGCTGATCTTCCCTGGTATCCTGGCT
TTCTGCATGATTTCCTCTGAGTTTGCGCTCCTCAAGCGCTCTTCGGTAGT
GACGCTGAKCATTTGCGGCATCTTCAAGGAAGTCGTCACCATCASTGCTG
CTGGGGTCATCTTCCACGATCAGCTCACTGCAGTCAACATTACGGGCTTG
GTGGTCACCATTGGCAGCATCGCGTCCTACAACTACATGAAGATCTCTAA
AATGCGCTCAGAAGCCCAGAAGGGCGCGTGGACACGCAGTCCCAATCTGG
ACTCTGAGGACGACTCCGATCCGACTGGGGAGCGCGGAGAGTACCGACGG
ATCCGTAACCCTGAAACGAGCACTTTCCAATCTCCGGGTATCCATGTCGA
CGAGGACAATGTGAATATCACTCCTGAGGATGACTTGACCGCTGGCGGTC
GGCGCTCATTCCGTGTTCGTGCCAGCGGCGCTAGCAATGCGCTCGGGTTA
AGCATCAACACCACCAATCTCGGGGACCACGATAGAAATTTCTCCCCTCG
AGTGTCGGCCCCCTCGCCCTTGAAATCGGCGCCCCCAGTCATCACGTCCC
TGGAAGCTGAGCTTAATCGATCGGCTTCTGGCCCTAGCTTCGGAAGCAAG
CCCCAGACATCTCCAGAACGGGCTTCACCGGAAGGACGCTCAGCTAGCTA
GATGGGTGTCTCTCCGTCTGGCAATCATCATCGACGGCGGAGCTCAGTAC
TGGCGGGCGCTTCACAGTCAGCTCCAATCGAGCATCGAGACGATATACCA
AGGGTCATTGGGGACGCTGCCGGCTCAAAACGAGAGGAGCCCAAGTCCTC
GCCGGCTGAGGACGCAGACATCTCGGACCTATCCTCGATCGCAGAGAGCT
TGGAGATGGATTATATCAGCTCAGACGACGACCTCCATGATGACGAAGAA
ACGGGCCTCACAGCGAAGCAGAGACGCCAGAGGCGCCGCAGAAGGCAGCA
GCGGCGACAGTTGGATGCCCGTATCGCCGACGTCAAGGCCTCGAAGCACG
ATACATTACCGTTGGGGTTCACAGATAGTGATGTCTTCAGGAGGCTGTCC
ATTAATGCGGGATTGATCCTGCTGTGGTATTTCTTTTCGCTGTCGATTTC
AATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262R8O |
| DBxref | InterPro:IPR004853 |
| DBxref | PFAM:PF03151 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:498330..500217 - |
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