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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:587630..588517+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006696-T1 ID=CBS51388_006696-T1|Name=CBS51388_006696-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=888bp|location=Sequence derived from alignment at An11:587630..588517+ (Aspergillus niger CBS 513.88)
ATGCCCTACGTTTTGCTGTATGCAAGCGTTACCACCAAGTCATTCATCAC
CACAAAAAATCATGCAGTGGAAATGGAACGCTATCCATACGATAAGGTCA
TCTTCCACCCGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGCCGGCA
CGAAGTAAACATTGCAGCATCTGCAAAGCATGTGTCGCACGGCATGACCA
TCACTGCGTTTGGCTCATGAACTGTGTCGGACTTCACAACTACCACTACT
TTCTTTCCATGATCTTGTCACTATGTCTCATGCTGCTCTACGGCTCATAC
CTGGGATACACTCTCTTGTATCAAACATACAACAGGCTGATACCATCGGA
CTCACCCTTGCGGACGACCCGGCAAACCTGGACTGGCTTTTGCAATATAT
GGGCTGTAGTTATTGCTGCTGATATTCGCATTGGTGCTATTACCTTGCTG
ATGACCATGACAGCACCACTGGCGGCCGCCTTTCTCGTGTACCACACCTA
CTTGATTTGGGCTGGTATGACGACCAACGAAAGCTCAAAGTGGTCAGACT
GGAAAGAAGAGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGGCTGAA
ATCTATAGCAGCTCACCCTTGTTGGCCGAGTATCAGAGTGCTCAGTCATT
CTGGCCAGTGAGTAGTGATCAGGTACTCATTCTGACAGATGGTGAGCCGC
CCAAGGAAGGGTGCTTGCTATCGCAACACTCCAATGAGATCACTCAGCCG
AGCAACAAGGACGCTCCGATAGACCGGAGGTGGATTCAGGTGCAAAGTAT
GAAGGAGATTGACAACATCTATGACCTGGGATTTTGGGACAATCTGCGTC
ATGTCTTGGGCTTACCCATTCGACCAAAGGTGATCTAA back to topCoding sequence (CDS) from alignment at An11:587630..588517+ >CBS51388_006696-T1 ID=CBS51388_006696-T1|Name=CBS51388_006696-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=888bp|location=Sequence derived from alignment at An11:587630..588517+ (Aspergillus niger CBS 513.88)
ATGCCCTACGTTTTGCTGTATGCAAGCGTTACCACCAAGTCATTCATCAC
CACAAAAAATCATGCAGTGGAAATGGAACGCTATCCATACGATAAGGTCA
TCTTCCACCCGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGCCGGCA
CGAAGTAAACATTGCAGCATCTGCAAAGCATGTGTCGCACGGCATGACCA
TCACTGCGTTTGGCTCATGAACTGTGTCGGACTTCACAACTACCACTACT
TTCTTTCCATGATCTTGTCACTATGTCTCATGCTGCTCTACGGCTCATAC
CTGGGATACACTCTCTTGTATCAAACATACAACAGGCTGATACCATCGGA
CTCACCCTTGCGGACGACCCGGCAAACCTGGACTGGCTTTTGCAATATAT
GGGCTGTAGTTATTGCTGCTGATATTCGCATTGGTGCTATTACCTTGCTG
ATGACCATGACAGCACCACTGGCGGCCGCCTTTCTCGTGTACCACACCTA
CTTGATTTGGGCTGGTATGACGACCAACGAAAGCTCAAAGTGGTCAGACT
GGAAAGAAGAGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGGCTGAA
ATCTATAGCAGCTCACCCTTGTTGGCCGAGTATCAGAGTGCTCAGTCATT
CTGGCCAGTGAGTAGTGATCAGGTACTCATTCTGACAGATGGTGAGCCGC
CCAAGGAAGGGTGCTTGCTATCGCAACACTCCAATGAGATCACTCAGCCG
AGCAACAAGGACGCTCCGATAGACCGGAGGTGGATTCAGGTGCAAAGTAT
GAAGGAGATTGACAACATCTATGACCTGGGATTTTGGGACAATCTGCGTC
ATGTCTTGGGCTTACCCATTCGACCAAAGGTGATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016409 | palmitoyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001594 |
| DBxref | PFAM:PF01529 |
| Product | palmitoyltransferase swf1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:587630..588517 + |
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