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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:914106..916375+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006802-T1 ID=CBS51388_006802-T1|Name=CBS51388_006802-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2270bp|location=Sequence derived from alignment at An11:914106..916375+ (Aspergillus niger CBS 513.88) ATGACCGCATGTGCTCGGTGTCAGAAACGGAAAATCCGAGTGAGTTGGTC
TGGTGGCATACGCTAGATCCCTCCTCTTCAGCACTAAGTCAATAATATCT
TCTAGTGCGACGGGGTTACTCCCGTCTGTGGGGGGTGCCAACGAGCCCAT
GTGGACTGCGTCGAAGGAGTTTCGTTCCGCGACATTTCCCGAAAGCAAGC
CACCCGACTATTGATCCCAGTACTTTACTAGTATCTAAGTGCTAAAACTC
CAATCTAGTTACGTCGATGAGCTAGAAGCACGAATCGAATGGCTAGAGTC
CATCATCCGTGAGCACCTGCCACACTTTGACCTCTGCAAACCTGATGAGC
CTGAGAGAAGTACTCGCTTGGATCGTCGTCATGGCGGCTCGGTCAGCAGA
GTATCGAACCAATCTTCTGCTTCGGAAGCACATCCTTCCCAAACCAATAA
CAATAAGGATGACTGGGGCCCAGCCCGTGATATCACCGATCAGCTCGGAC
TGATCTCGATCAACGCAGAGGCAGATCTTCGTTATCTAGGCCCTTCCAGC
GGATTATTCTTCACCAGGTTCGTGCTGACCGGCCTTGGACGAAGAGCCGA
ACTGGCACCAGAATCAGTATCCCCATCCGGGGAAACCAACTTCATCCCTG
CCGAACTTCTCGACATTCAGCCCAAAGACCTGCCATCTGATCTAAACCAG
GCCCAGTGGTTGACCCAGGCATATTTCCAAGCGGTTCATGGACAATTTCC
CTTTCTGCATAGACCATCTCACCTGGAGCTTCTGCAAAGAGCCTACAATG
GTATCGAACTCCTGCCCATCGATCAATTCCAGATCTATATGGTCCTGGCC
ATCGGCGCCACTATTCGATCACGACAATTGAAAGTGCTGCTTTCAGCAGA
AGGATACTGTGCCTCGGCTATCGTCCATCTGGACACCATCTTCCAGAAGT
CGTCGGTGCGCGGCGTACAGTGCATGCTGCTTTTGCAAATGTACACGTTT
CACAATCCTTCCTCGGCAATCAGTCTGTGGACTTTGCATTATCACTGTCT
GGCTCACGTGTTGGAACTCGGTTTGCATCGCAATTTTCGTGGCTCTGCCT
TCACTGAGTTTGATCAAGAGATGCGCACCCGGGTCTTCTGGTGCGTGTAT
ACGATGGATCGCTACCTTTGCACCTCGCTCGGTAGGGCGATAGGCATTAT
GGATGAGCAGTGCGATCTAAGAGTATCTTGCGCCTTTCCCACAATTACTG
CAAGAGAGAAGACGCTGATAATCATCACAGTTACCACGCGACATCAACGA
CGAGGACCTACAACCAGATCAACCGATCCCGACTCAACAATCCTTTACAA
CAATAAAAGACATGTCCAGCGCAATCCACCTCTTTAAACTCGCCCGATTC
AGCGCCGAGATCAAATGCGTTCTATATTGCATCGACCGAAATTATCCCCC
CTACACTCAGCCCACCATCACAGACCCCAACCACTGGCAACAAGATATGC
TCCACCGTCTGCATGAGTGGAAAGCAGCCATCCCTCACCATCCTCCCCAA
AGCCCAGTGTACTACATGAACAGTCTGCTCGAGATCAAATACCACGAGCT
AGTGATGTTGGCCGTACGCCCCAGTCCTCTCTTCCCATATCCTTCGAGGT
CCTTGGTTAAACTATGCTTCGACTCCGCCTTACAATGCACAGGACTTTAC
CATCAGCTATATGTTACCAGTACGCTGCACTATAACCGAACGATCGTCCA
ATCGCTATTCCTGTGCACGGTTACCCTCTTTTATTGTATCTGGGCGCCAA
ACGGGTTAGGAGAGGAAGAAACGACCCTCGACACCGTCCTACACTCACTG
AAGTCCGCTTCAGACATCCTCAGTGCCGCCGGAGAATATTGGCTTGAAGT
GAAACGAACTCGCGATGTACTAGATTGCATCACCAGGGCTACGATGCGGC
GGTTTGCTCGGAGACTTGGTCAACCATCGGCAAGCTTTTCATCAGGGAAT
AGCGGGACCTTGCAGAGAAACAGCGTTCAAGAGCCATCGATAGTGGACTT
GCCTACTACGATCTTGAATGATAGGCCGAGTACCGATGACATCACTGCTG
ATGATTATGGGGCAGGGCAGGTCTTAAATGATCCGTACTATGTGCCGGTG
CAGCAGCCCAATGCTACACCTGAGTTCATGTCTTTCTTTATGGATCCTCA
GCCCGAGTCGGCGATGGAGTTGTTGGATTTCTCGTGGGATGTGTTTGGTG
GGGTGGATGATGTGGCGTAG back to topCoding sequence (CDS) from alignment at An11:914106..916375+ >CBS51388_006802-T1 ID=CBS51388_006802-T1|Name=CBS51388_006802-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8244bp|location=Sequence derived from alignment at An11:914106..916375+ (Aspergillus niger CBS 513.88) ATGACCGCATGTGCTCGGTGTCAGAAACGGAAAATCCGATGCGACGGGGT TACTCCCGTCTGTGGGGGGTGCCAACGAGCCCATGTGGACTGCGTCGAAG GAGTTTCTTACGTCGATGAGCTAGAAGCACGAATCGAATGGCTAGAGTCC ATCATCCGTGAGCACCTGCCACACTTTGACCTCTGCAAACCTGATGAGCC TGAGAGAAGTACTCGCTTGGATCGTCGTCATGGCGGCTCGGTCAGCAGAG TATCGAACCAATCTTCTGCTTCGGAAGCACATCCTTCCCAAACCAATAAC AATAAGGATGACTGGGGCCCAGCCCGTGATATCACCGATCAGCTCGGACT GATCTCGATCAACGCAGAGGCAGATCTTCGTTATCTAGGCCCTTCCAGCG GATTATTCTTCACCAGGTTCGTGCTGACCGGCCTTGGACGAAGAGCCGAA CTGGCACCAGAATCAGTATCCCCATCCGGGGAAACCAACTTCATCCCTGC CGAACTTCTCGACATTCAGCCCAAAGACCTGCCATCTGATCTAAACCAGG CCCAGTGGTTGACCCAGGCATATTTCCAAGCGGTTCATGGACAATTTCCC TTTCTGCATAGACCATCTCACCTGGAGCTTCTGCAAAGAGCCTACAATGG TATCGAACTCCTGCCCATCGATCAATTCCAGATCTATATGGTCCTGGCCA TCGGCGCCACTATTCGATCACGACAATTGAAAGTGCTGCTTTCAGCAGAA GGATACTGTGCCTCGGCTATCGTCCATCTGGACACCATCTTCCAGAAGTC GTCGGTGCGCGGCGTACAGTGCATGCTGCTTTTGCAAATGTACACGTTTC ACAATCCTTCCTCGGCAATCAGTCTGTGGACTTTGCATTATCACTGTCTG GCTCACGTGTTGGAACTCGGTTTGCATCGCAATTTTCGTGGCTCTGCCTT CACTGAGTTTGATCAAGAGATGCGCACCCGGGTCTTCTGGTGCGTGTATA CGATGGATCGCTACCTTTGCACCTCGCTCGGTAGGGCGATAGGCATTATG GATGAGCAGTGCGATCTAAGATTACCACGCGACATCAACGACGAGGACCT ACAACCAGATCAACCGATCCCGACTCAACAATCCTTTACAACAATAAAAG ACATGTCCAGCGCAATCCACCTCTTTAAACTCGCCCGATTCAGCGCCGAG ATCAAATGCGTTCTATATTGCATCGACCGAAATTATCCCCCCTACACTCA GCCCACCATCACAGACCCCAACCACTGGCAACAAGATATGCTCCACCGTC TGCATGAGTGGAAAGCAGCCATCCCTCACCATCCTCCCCAAAGCCCAGTG TACTACATGAACAGTCTGCTCGAGATCAAATACCACGAGCTAGTGATGTT GGCCGTACGCCCCAGTCCTCTCTTCCCATATCCTTCGAGGTCCTTGGTTA AACTATGCTTCGACTCCGCCTTACAATGCACAGGACTTTACCATCAGCTA TATGTTACCAGTACGCTGCACTATAACCGAACGATCGTCCAATCGCTATT CCTGTGCACGGTTACCCTCTTTTATTGTATCTGGGCGCCAAACGGGTTAG GAGAGGAAGAAACGACCCTCGACACCGTCCTACACTCACTGAAGTCCGCT TCAGACATCCTCAGTGCCGCCGGAGAATATTGGCTTGAAGTGAAACGAAC TCGCGATGTACTAGATTGCATCACCAGGGCTACGATGCGGCGGTTTGCTC GGAGACTTGGTCAACCATCGGCAAGCTTTTCATCAGGGAATAGCGGGACC TTGCAGAGAAACAGCGTTCAAGAGCCATCGATAGTGGACTTGCCTACTAC GATCTTGAATGATAGGCCGAGTACCGATGACATCACTGCTGATGATTATG GGGCAGGGCAGGTCTTAAATGATCCGTACTATGTGCCGGTGCAGCAGCCC AATGCTACACCTGAGTTCATGTCTTTCTTTATGGATCCTCAGCCCGAGTC GGCGATGGAGTTGTTGGATTTCTCGTGGGATGTGTTTGGTGGGGTGGATG ATGTGGCGTAGATGACCGCATGTGCTCGGTGTCAGAAACGGAAAATCCGA TGCGACGGGGTTACTCCCGTCTGTGGGGGGTGCCAACGAGCCCATGTGGA CTGCGTCGAAGGAGTTTCTTACGTCGATGAGCTAGAAGCACGAATCGAAT GGCTAGAGTCCATCATCCGTGAGCACCTGCCACACTTTGACCTCTGCAAA CCTGATGAGCCTGAGAGAAGTACTCGCTTGGATCGTCGTCATGGCGGCTC GGTCAGCAGAGTATCGAACCAATCTTCTGCTTCGGAAGCACATCCTTCCC AAACCAATAACAATAAGGATGACTGGGGCCCAGCCCGTGATATCACCGAT CAGCTCGGACTGATCTCGATCAACGCAGAGGCAGATCTTCGTTATCTAGG CCCTTCCAGCGGATTATTCTTCACCAGGTTCGTGCTGACCGGCCTTGGAC GAAGAGCCGAACTGGCACCAGAATCAGTATCCCCATCCGGGGAAACCAAC TTCATCCCTGCCGAACTTCTCGACATTCAGCCCAAAGACCTGCCATCTGA TCTAAACCAGGCCCAGTGGTTGACCCAGGCATATTTCCAAGCGGTTCATG GACAATTTCCCTTTCTGCATAGACCATCTCACCTGGAGCTTCTGCAAAGA GCCTACAATGGTATCGAACTCCTGCCCATCGATCAATTCCAGATCTATAT GGTCCTGGCCATCGGCGCCACTATTCGATCACGACAATTGAAAGTGCTGC TTTCAGCAGAAGGATACTGTGCCTCGGCTATCGTCCATCTGGACACCATC TTCCAGAAGTCGTCGGTGCGCGGCGTACAGTGCATGCTGCTTTTGCAAAT GTACACGTTTCACAATCCTTCCTCGGCAATCAGTCTGTGGACTTTGCATT ATCACTGTCTGGCTCACGTGTTGGAACTCGGTTTGCATCGCAATTTTCGT GGCTCTGCCTTCACTGAGTTTGATCAAGAGATGCGCACCCGGGTCTTCTG GTGCGTGTATACGATGGATCGCTACCTTTGCACCTCGCTCGGTAGGGCGA TAGGCATTATGGATGAGCAGTGCGATCTAAGATTACCACGCGACATCAAC GACGAGGACCTACAACCAGATCAACCGATCCCGACTCAACAATCCTTTAC AACAATAAAAGACATGTCCAGCGCAATCCACCTCTTTAAACTCGCCCGAT TCAGCGCCGAGATCAAATGCGTTCTATATTGCATCGACCGAAATTATCCC CCCTACACTCAGCCCACCATCACAGACCCCAACCACTGGCAACAAGATAT GCTCCACCGTCTGCATGAGTGGAAAGCAGCCATCCCTCACCATCCTCCCC AAAGCCCAGTGTACTACATGAACAGTCTGCTCGAGATCAAATACCACGAG CTAGTGATGTTGGCCGTACGCCCCAGTCCTCTCTTCCCATATCCTTCGAG GTCCTTGGTTAAACTATGCTTCGACTCCGCCTTACAATGCACAGGACTTT ACCATCAGCTATATGTTACCAGTACGCTGCACTATAACCGAACGATCGTC CAATCGCTATTCCTGTGCACGGTTACCCTCTTTTATTGTATCTGGGCGCC AAACGGGTTAGGAGAGGAAGAAACGACCCTCGACACCGTCCTACACTCAC TGAAGTCCGCTTCAGACATCCTCAGTGCCGCCGGAGAATATTGGCTTGAA GTGAAACGAACTCGCGATGTACTAGATTGCATCACCAGGGCTACGATGCG GCGGTTTGCTCGGAGACTTGGTCAACCATCGGCAAGCTTTTCATCAGGGA ATAGCGGGACCTTGCAGAGAAACAGCGTTCAAGAGCCATCGATAGTGGAC TTGCCTACTACGATCTTGAATGATAGGCCGAGTACCGATGACATCACTGC TGATGATTATGGGGCAGGGCAGGTCTTAAATGATCCGTACTATGTGCCGG TGCAGCAGCCCAATGCTACACCTGAGTTCATGTCTTTCTTTATGGATCCT CAGCCCGAGTCGGCGATGGAGTTGTTGGATTTCTCGTGGGATGTGTTTGG TGGGGTGGATGATGTGGCGTAGATGACCGCATGTGCTCGGTGTCAGAAAC GGAAAATCCGATGCGACGGGGTTACTCCCGTCTGTGGGGGGTGCCAACGA GCCCATGTGGACTGCGTCGAAGGAGTTTCTTACGTCGATGAGCTAGAAGC ACGAATCGAATGGCTAGAGTCCATCATCCGTGAGCACCTGCCACACTTTG ACCTCTGCAAACCTGATGAGCCTGAGAGAAGTACTCGCTTGGATCGTCGT CATGGCGGCTCGGTCAGCAGAGTATCGAACCAATCTTCTGCTTCGGAAGC ACATCCTTCCCAAACCAATAACAATAAGGATGACTGGGGCCCAGCCCGTG ATATCACCGATCAGCTCGGACTGATCTCGATCAACGCAGAGGCAGATCTT CGTTATCTAGGCCCTTCCAGCGGATTATTCTTCACCAGGTTCGTGCTGAC CGGCCTTGGACGAAGAGCCGAACTGGCACCAGAATCAGTATCCCCATCCG GGGAAACCAACTTCATCCCTGCCGAACTTCTCGACATTCAGCCCAAAGAC CTGCCATCTGATCTAAACCAGGCCCAGTGGTTGACCCAGGCATATTTCCA AGCGGTTCATGGACAATTTCCCTTTCTGCATAGACCATCTCACCTGGAGC TTCTGCAAAGAGCCTACAATGGTATCGAACTCCTGCCCATCGATCAATTC CAGATCTATATGGTCCTGGCCATCGGCGCCACTATTCGATCACGACAATT GAAAGTGCTGCTTTCAGCAGAAGGATACTGTGCCTCGGCTATCGTCCATC TGGACACCATCTTCCAGAAGTCGTCGGTGCGCGGCGTACAGTGCATGCTG CTTTTGCAAATGTACACGTTTCACAATCCTTCCTCGGCAATCAGTCTGTG GACTTTGCATTATCACTGTCTGGCTCACGTGTTGGAACTCGGTTTGCATC GCAATTTTCGTGGCTCTGCCTTCACTGAGTTTGATCAAGAGATGCGCACC CGGGTCTTCTGGTGCGTGTATACGATGGATCGCTACCTTTGCACCTCGCT CGGTAGGGCGATAGGCATTATGGATGAGCAGTGCGATCTAAGATTACCAC GCGACATCAACGACGAGGACCTACAACCAGATCAACCGATCCCGACTCAA CAATCCTTTACAACAATAAAAGACATGTCCAGCGCAATCCACCTCTTTAA ACTCGCCCGATTCAGCGCCGAGATCAAATGCGTTCTATATTGCATCGACC GAAATTATCCCCCCTACACTCAGCCCACCATCACAGACCCCAACCACTGG CAACAAGATATGCTCCACCGTCTGCATGAGTGGAAAGCAGCCATCCCTCA CCATCCTCCCCAAAGCCCAGTGTACTACATGAACAGTCTGCTCGAGATCA AATACCACGAGCTAGTGATGTTGGCCGTACGCCCCAGTCCTCTCTTCCCA TATCCTTCGAGGTCCTTGGTTAAACTATGCTTCGACTCCGCCTTACAATG CACAGGACTTTACCATCAGCTATATGTTACCAGTACGCTGCACTATAACC GAACGATCGTCCAATCGCTATTCCTGTGCACGGTTACCCTCTTTTATTGT ATCTGGGCGCCAAACGGGTTAGGAGAGGAAGAAACGACCCTCGACACCGT CCTACACTCACTGAAGTCCGCTTCAGACATCCTCAGTGCCGCCGGAGAAT ATTGGCTTGAAGTGAAACGAACTCGCGATGTACTAGATTGCATCACCAGG GCTACGATGCGGCGGTTTGCTCGGAGACTTGGTCAACCATCGGCAAGCTT TTCATCAGGGAATAGCGGGACCTTGCAGAGAAACAGCGTTCAAGAGCCAT CGATAGTGGACTTGCCTACTACGATCTTGAATGATAGGCCGAGTACCGAT GACATCACTGCTGATGATTATGGGGCAGGGCAGGTCTTAAATGATCCGTA CTATGTGCCGGTGCAGCAGCCCAATGCTACACCTGAGTTCATGTCTTTCT TTATGGATCCTCAGCCCGAGTCGGCGATGGAGTTGTTGGATTTCTCGTGG GATGTGTTTGGTGGGGTGGATGATGTGGCGTAGATGACCGCATGTGCTCG GTGTCAGAAACGGAAAATCCGATGCGACGGGGTTACTCCCGTCTGTGGGG GGTGCCAACGAGCCCATGTGGACTGCGTCGAAGGAGTTTCTTACGTCGAT GAGCTAGAAGCACGAATCGAATGGCTAGAGTCCATCATCCGTGAGCACCT GCCACACTTTGACCTCTGCAAACCTGATGAGCCTGAGAGAAGTACTCGCT TGGATCGTCGTCATGGCGGCTCGGTCAGCAGAGTATCGAACCAATCTTCT GCTTCGGAAGCACATCCTTCCCAAACCAATAACAATAAGGATGACTGGGG CCCAGCCCGTGATATCACCGATCAGCTCGGACTGATCTCGATCAACGCAG AGGCAGATCTTCGTTATCTAGGCCCTTCCAGCGGATTATTCTTCACCAGG TTCGTGCTGACCGGCCTTGGACGAAGAGCCGAACTGGCACCAGAATCAGT ATCCCCATCCGGGGAAACCAACTTCATCCCTGCCGAACTTCTCGACATTC AGCCCAAAGACCTGCCATCTGATCTAAACCAGGCCCAGTGGTTGACCCAG GCATATTTCCAAGCGGTTCATGGACAATTTCCCTTTCTGCATAGACCATC TCACCTGGAGCTTCTGCAAAGAGCCTACAATGGTATCGAACTCCTGCCCA TCGATCAATTCCAGATCTATATGGTCCTGGCCATCGGCGCCACTATTCGA TCACGACAATTGAAAGTGCTGCTTTCAGCAGAAGGATACTGTGCCTCGGC TATCGTCCATCTGGACACCATCTTCCAGAAGTCGTCGGTGCGCGGCGTAC AGTGCATGCTGCTTTTGCAAATGTACACGTTTCACAATCCTTCCTCGGCA ATCAGTCTGTGGACTTTGCATTATCACTGTCTGGCTCACGTGTTGGAACT CGGTTTGCATCGCAATTTTCGTGGCTCTGCCTTCACTGAGTTTGATCAAG AGATGCGCACCCGGGTCTTCTGGTGCGTGTATACGATGGATCGCTACCTT TGCACCTCGCTCGGTAGGGCGATAGGCATTATGGATGAGCAGTGCGATCT AAGATTACCACGCGACATCAACGACGAGGACCTACAACCAGATCAACCGA TCCCGACTCAACAATCCTTTACAACAATAAAAGACATGTCCAGCGCAATC CACCTCTTTAAACTCGCCCGATTCAGCGCCGAGATCAAATGCGTTCTATA TTGCATCGACCGAAATTATCCCCCCTACACTCAGCCCACCATCACAGACC CCAACCACTGGCAACAAGATATGCTCCACCGTCTGCATGAGTGGAAAGCA GCCATCCCTCACCATCCTCCCCAAAGCCCAGTGTACTACATGAACAGTCT GCTCGAGATCAAATACCACGAGCTAGTGATGTTGGCCGTACGCCCCAGTC CTCTCTTCCCATATCCTTCGAGGTCCTTGGTTAAACTATGCTTCGACTCC GCCTTACAATGCACAGGACTTTACCATCAGCTATATGTTACCAGTACGCT GCACTATAACCGAACGATCGTCCAATCGCTATTCCTGTGCACGGTTACCC TCTTTTATTGTATCTGGGCGCCAAACGGGTTAGGAGAGGAAGAAACGACC CTCGACACCGTCCTACACTCACTGAAGTCCGCTTCAGACATCCTCAGTGC CGCCGGAGAATATTGGCTTGAAGTGAAACGAACTCGCGATGTACTAGATT GCATCACCAGGGCTACGATGCGGCGGTTTGCTCGGAGACTTGGTCAACCA TCGGCAAGCTTTTCATCAGGGAATAGCGGGACCTTGCAGAGAAACAGCGT TCAAGAGCCATCGATAGTGGACTTGCCTACTACGATCTTGAATGATAGGC CGAGTACCGATGACATCACTGCTGATGATTATGGGGCAGGGCAGGTCTTA AATGATCCGTACTATGTGCCGGTGCAGCAGCCCAATGCTACACCTGAGTT CATGTCTTTCTTTATGGATCCTCAGCCCGAGTCGGCGATGGAGTTGTTGG ATTTCTCGTGGGATGTGTTTGGTGGGGTGGATGATGTGGCGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
| GO:0042025 | host cell nucleus |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| An11 | supercontig | An11:914106..916375 + |
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