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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:929119..930662+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006806-T1 ID=CBS51388_006806-T1|Name=CBS51388_006806-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1544bp|location=Sequence derived from alignment at An11:929119..930662+ (Aspergillus niger CBS 513.88)
ATGGCTCGTCGTTTTTTCGCCGCCTGCAGCGCCCTGCTGCTGGCCACGCA
AGCAGCCGCCGATAATTTCCCCTACAACTCCTACCGCACCGCTCCATACA
CCCCTCCCCAAATCAAGGTCACCAAGTCCGGCCAAACAGACCCTGGATAT
ATTTTCGTCGGTCCCCGTGGAAATCAGCCGCAAGGAACGGCAGCTCTGAT
ATACGATGAGGATGGTCAGTTGGTCTACGAAGGGCCGGAGGAGGTAACGG
CCAACTTCAAGGTGCAGAAACTCTTCAACGAGGACGTCATCACCTTCTGG
GCCGGAAATATGATGGATTTGGGCTTTGGATACGGCACGGTTCATATTCT
TGACAACACCTACCGCGAAATCTACACCGTCACCCTCCAGGACAACTTCG
TCTCTCCCGACGGCACCCCTAGAGATTCGTACATCGATCTACACGAGAGT
CATGTGACGGATCGCAACACACTCTTAGTCACAGCCTACAACGTCACCCA
GCACGATTTGTCTTCCATCGGCGGCAAACCAGACGACTACATGCTTGACG
GCATGTTCTTCGAAATCGATATCGCAACCAACGAGATTGTGTATCAGTGG
AGCGCATTGGACCACCTTCAGGACATCCCCCTCGAGGCCTCCAAGCAGGG
CTTGGGAGCAGATCAGGGAACGCAGGACAAGCCATGGGACGCTTACCACA
TCAACTCGGTCGAGCTGATGAATGAAGGATACATCATTTCGCTGCGTCAC
TACTGGTCCGGCTTCTATGTCCACAACAATGGGACAGTGATGTGGCAGCT
CAGTGTAAGTGAAATCTCTTAGCTCTTGGTTGTAACCCACCAGCTAATTT
TTGATAGGGTGAGCGCAATGCCGGCGACTTTGAAATTGATGACGGTGCCA
TCTTCTCCTGGCAGCACGACATCCGTGTCTACCACCAGACGGAAGACAGC
ATGGAGATCAGCTTGTTCAACAACGCCAACACACCCACGGATACTGTCGA
CGCAACCACCGGCTTGAATCTGCACGTTGACCTAACCAACCGCAAGGTGT
CAACGCTGCGCACGCTGAAAGACTCGAGCGACGTGATACACAGTGTTAGC
CAGGGCAGCTACCAGCTTCTCAGTGAGGAGACGTCCCACGTTGTGCTGGG
CTACGGTTCCATCGCGAAAGTCAAGGAATATGACGCCCACAACAATGAGG
TGATGACGGCGCAGTTTGGTGACGACAATGCGGTGGCGTCTTACCGCGGC
TACAAGTGCCAGTGGAAGGCGACTCCCTTCTGGCAGCCCGCGGTGGCGAT
CGTCCGGACGACGTCGGATGCGGCCACTCTGTTTATGAGCTGGAACGGGG
CCACGGAGTATGACAACTGGGCCATCTATACGGCCTCGTCGGCAGATGCG
GTCGACCCGACATTCGTCACGTCGATCAAGCGCAACGGGTTTGAGACCAC
GGCGCATGTGACGGGACTGCGCACCAACTGGCTCCAAGTGGTTGCTCGGA
AGGGTAACGTTCCTCTGGGGACATCCGCCATGGCGTACTTCTAG back to topCoding sequence (CDS) from alignment at An11:929119..930662+ >CBS51388_006806-T1 ID=CBS51388_006806-T1|Name=CBS51388_006806-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2982bp|location=Sequence derived from alignment at An11:929119..930662+ (Aspergillus niger CBS 513.88)
ATGGCTCGTCGTTTTTTCGCCGCCTGCAGCGCCCTGCTGCTGGCCACGCA
AGCAGCCGCCGATAATTTCCCCTACAACTCCTACCGCACCGCTCCATACA
CCCCTCCCCAAATCAAGGTCACCAAGTCCGGCCAAACAGACCCTGGATAT
ATTTTCGTCGGTCCCCGTGGAAATCAGCCGCAAGGAACGGCAGCTCTGAT
ATACGATGAGGATGGTCAGTTGGTCTACGAAGGGCCGGAGGAGGTAACGG
CCAACTTCAAGGTGCAGAAACTCTTCAACGAGGACGTCATCACCTTCTGG
GCCGGAAATATGATGGATTTGGGCTTTGGATACGGCACGGTTCATATTCT
TGACAACACCTACCGCGAAATCTACACCGTCACCCTCCAGGACAACTTCG
TCTCTCCCGACGGCACCCCTAGAGATTCGTACATCGATCTACACGAGAGT
CATGTGACGGATCGCAACACACTCTTAGTCACAGCCTACAACGTCACCCA
GCACGATTTGTCTTCCATCGGCGGCAAACCAGACGACTACATGCTTGACG
GCATGTTCTTCGAAATCGATATCGCAACCAACGAGATTGTGTATCAGTGG
AGCGCATTGGACCACCTTCAGGACATCCCCCTCGAGGCCTCCAAGCAGGG
CTTGGGAGCAGATCAGGGAACGCAGGACAAGCCATGGGACGCTTACCACA
TCAACTCGGTCGAGCTGATGAATGAAGGATACATCATTTCGCTGCGTCAC
TACTGGTCCGGCTTCTATGTCCACAACAATGGGACAGTGATGTGGCAGCT
CAGTGGTGAGCGCAATGCCGGCGACTTTGAAATTGATGACGGTGCCATCT
TCTCCTGGCAGCACGACATCCGTGTCTACCACCAGACGGAAGACAGCATG
GAGATCAGCTTGTTCAACAACGCCAACACACCCACGGATACTGTCGACGC
AACCACCGGCTTGAATCTGCACGTTGACCTAACCAACCGCAAGGTGTCAA
CGCTGCGCACGCTGAAAGACTCGAGCGACGTGATACACAGTGTTAGCCAG
GGCAGCTACCAGCTTCTCAGTGAGGAGACGTCCCACGTTGTGCTGGGCTA
CGGTTCCATCGCGAAAGTCAAGGAATATGACGCCCACAACAATGAGGTGA
TGACGGCGCAGTTTGGTGACGACAATGCGGTGGCGTCTTACCGCGGCTAC
AAGTGCCAGTGGAAGGCGACTCCCTTCTGGCAGCCCGCGGTGGCGATCGT
CCGGACGACGTCGGATGCGGCCACTCTGTTTATGAGCTGGAACGGGGCCA
CGGAGTATGACAACTGGGCCATCTATACGGCCTCGTCGGCAGATGCGGTC
GACCCGACATTCGTCACGTCGATCAAGCGCAACGGGTTTGAGACCACGGC
GCATGTGACGGGACTGCGCACCAACTGGCTCCAAGTGGTTGCTCGGAAGG
GTAACGTTCCTCTGGGGACATCCGCCATGGCGTACTTCTAGATGGCTCGT
CGTTTTTTCGCCGCCTGCAGCGCCCTGCTGCTGGCCACGCAAGCAGCCGC
CGATAATTTCCCCTACAACTCCTACCGCACCGCTCCATACACCCCTCCCC
AAATCAAGGTCACCAAGTCCGGCCAAACAGACCCTGGATATATTTTCGTC
GGTCCCCGTGGAAATCAGCCGCAAGGAACGGCAGCTCTGATATACGATGA
GGATGGTCAGTTGGTCTACGAAGGGCCGGAGGAGGTAACGGCCAACTTCA
AGGTGCAGAAACTCTTCAACGAGGACGTCATCACCTTCTGGGCCGGAAAT
ATGATGGATTTGGGCTTTGGATACGGCACGGTTCATATTCTTGACAACAC
CTACCGCGAAATCTACACCGTCACCCTCCAGGACAACTTCGTCTCTCCCG
ACGGCACCCCTAGAGATTCGTACATCGATCTACACGAGAGTCATGTGACG
GATCGCAACACACTCTTAGTCACAGCCTACAACGTCACCCAGCACGATTT
GTCTTCCATCGGCGGCAAACCAGACGACTACATGCTTGACGGCATGTTCT
TCGAAATCGATATCGCAACCAACGAGATTGTGTATCAGTGGAGCGCATTG
GACCACCTTCAGGACATCCCCCTCGAGGCCTCCAAGCAGGGCTTGGGAGC
AGATCAGGGAACGCAGGACAAGCCATGGGACGCTTACCACATCAACTCGG
TCGAGCTGATGAATGAAGGATACATCATTTCGCTGCGTCACTACTGGTCC
GGCTTCTATGTCCACAACAATGGGACAGTGATGTGGCAGCTCAGTGGTGA
GCGCAATGCCGGCGACTTTGAAATTGATGACGGTGCCATCTTCTCCTGGC
AGCACGACATCCGTGTCTACCACCAGACGGAAGACAGCATGGAGATCAGC
TTGTTCAACAACGCCAACACACCCACGGATACTGTCGACGCAACCACCGG
CTTGAATCTGCACGTTGACCTAACCAACCGCAAGGTGTCAACGCTGCGCA
CGCTGAAAGACTCGAGCGACGTGATACACAGTGTTAGCCAGGGCAGCTAC
CAGCTTCTCAGTGAGGAGACGTCCCACGTTGTGCTGGGCTACGGTTCCAT
CGCGAAAGTCAAGGAATATGACGCCCACAACAATGAGGTGATGACGGCGC
AGTTTGGTGACGACAATGCGGTGGCGTCTTACCGCGGCTACAAGTGCCAG
TGGAAGGCGACTCCCTTCTGGCAGCCCGCGGTGGCGATCGTCCGGACGAC
GTCGGATGCGGCCACTCTGTTTATGAGCTGGAACGGGGCCACGGAGTATG
ACAACTGGGCCATCTATACGGCCTCGTCGGCAGATGCGGTCGACCCGACA
TTCGTCACGTCGATCAAGCGCAACGGGTTTGAGACCACGGCGCATGTGAC
GGGACTGCGCACCAACTGGCTCCAAGTGGTTGCTCGGAAGGGTAACGTTC
CTCTGGGGACATCCGCCATGGCGTACTTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR039535 |
| DBxref | PFAM:PF14269 |
| DBxref | PFAM:PF05935 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:929119..930662 + |
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