You are here

Home

CBS51388_007113-T1, CBS51388_007113-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007113-T1
Unique NameCBS51388_007113-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1837445..1838604+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007113-T1 ID=CBS51388_007113-T1|Name=CBS51388_007113-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1160bp|location=Sequence derived from alignment at An11:1837445..1838604+ (Aspergillus niger CBS 513.88)
ATGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCATGAGAA
CCCACTGGTACGCTCTCTTCTTCCTATTTCAATGGCATGTTTGGTGTTAA
TCTGGTGAATACAGGGCCTCCCTCGCTCCGGTACGCCGCCGTCTCTCCGA
AGTCGTCGCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAGAAGGT
TATTGCTGTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGATAGCGG
GTATGCCTCTATACCAATATATATCTTACATCAATCAGACGAGATACTTA
TGTTCCTATTATCAACAGTCAACCTCGCTCTCGCCTTCGCCCGCCGCGGC
ATTCGCACCGGCATCCTCGACACCGACATCTTCGGTCCATCCATTCCAAC
CCTGTTGAATCTATCCGGCGAGCCTAGATTAGACGATAGTGCGTTCTACC
ATCTCCCTTGCGCAACACATAACTAACGTCACGGACCTTCAACAGAAAAC
TGCCTCCTCCCCCTAACCAACTACGGCCTCAAATCCATGTCCATGGGCTA
CCTCCTCCCCAGCACCCAACCACCCCCGAACACCGATCCGACCGAGCGAG
CCCCCATGGACCCGACCCCCATTTCCTGGCGTGGCCTAATGGTCACCAAA
GCGATGCACCAACTCCTCCACTCCGTATCCTGGGGTCCACTCGACGTTCT
CTTCCTCGACTTGCCCCCGGGCACCGGCGACGTGCAACTCACCATCAACC
AGGAAATTATCCTCGATGGGGCAGTGATCGTGACCACGCCGCAGGATATC
GCGCTACGGGATGCGGTGCGCGGAATTGGCATGTTCCAGCGCATGGATGT
GCCGGTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGCGTGCCCGGAGT
GTGGGACGCAGACGAAGATCTTTTCGCAGGGGAGGCATGTCCATGAGGGG
GCGGATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTCGGTGTTGGGTTTTT
GGGTGATGTGCCGCTGGATGCGAGGGTTTGTGAGGATGCGGACCGCGGGG
TGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGGTTAGG
AGGAAGGCGTTTTTGGATGTTGCGGAGCAGGTTGCGAAGAAGGTGGGAAT
TGAGTGGTAA
back to top

Coding sequence (CDS) from alignment at An11:1837445..1838604+

>CBS51388_007113-T1 ID=CBS51388_007113-T1|Name=CBS51388_007113-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3912bp|location=Sequence derived from alignment at An11:1837445..1838604+ (Aspergillus niger CBS 513.88)
ATGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCATGAGAA
CCCACTGGGCCTCCCTCGCTCCGGTACGCCGCCGTCTCTCCGAAGTCGTC
GCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAGAAGGTTATTGCT
GTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGATAGCGGTCAACCT
CGCTCTCGCCTTCGCCCGCCGCGGCATTCGCACCGGCATCCTCGACACCG
ACATCTTCGGTCCATCCATTCCAACCCTGTTGAATCTATCCGGCGAGCCT
AGATTAGACGATAAAAACTGCCTCCTCCCCCTAACCAACTACGGCCTCAA
ATCCATGTCCATGGGCTACCTCCTCCCCAGCACCCAACCACCCCCGAACA
CCGATCCGACCGAGCGAGCCCCCATGGACCCGACCCCCATTTCCTGGCGT
GGCCTAATGGTCACCAAAGCGATGCACCAACTCCTCCACTCCGTATCCTG
GGGTCCACTCGACGTTCTCTTCCTCGACTTGCCCCCGGGCACCGGCGACG
TGCAACTCACCATCAACCAGGAAATTATCCTCGATGGGGCAGTGATCGTG
ACCACGCCGCAGGATATCGCGCTACGGGATGCGGTGCGCGGAATTGGCAT
GTTCCAGCGCATGGATGTGCCGGTGCTGGGGATGGTGAGGAATATGGCGT
TCTTTGCGTGCCCGGAGTGTGGGACGCAGACGAAGATCTTTTCGCAGGGG
AGGCATGTCCATGAGGGGGCGGATTGGGGGGTTGAGGCCGAGTGTAGGAG
GCTCGGTGTTGGGTTTTTGGGTGATGTGCCGCTGGATGCGAGGGTTTGTG
AGGATGCGGACCGCGGGGTGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAG
GGCAAGGAGGGGGTTAGGAGGAAGGCGTTTTTGGATGTTGCGGAGCAGGT
TGCGAAGAAGGTGGGAATTGAGTGGTAAATGTTGGGGAAGAGATTGTTCT
CCACGTTTCGGAGCTTGCAGCATGAGAACCCACTGGGCCTCCCTCGCTCC
GGTACGCCGCCGTCTCTCCGAAGTCGTCGCGGTCTCCCCGAGAAGCGCAA
GATCCGCGATGTGAAGAAGGTTATTGCTGTGTCTTCGGCGAAGGGCGGTG
TTGGGAAGTCGACGATAGCGGTCAACCTCGCTCTCGCCTTCGCCCGCCGC
GGCATTCGCACCGGCATCCTCGACACCGACATCTTCGGTCCATCCATTCC
AACCCTGTTGAATCTATCCGGCGAGCCTAGATTAGACGATAAAAACTGCC
TCCTCCCCCTAACCAACTACGGCCTCAAATCCATGTCCATGGGCTACCTC
CTCCCCAGCACCCAACCACCCCCGAACACCGATCCGACCGAGCGAGCCCC
CATGGACCCGACCCCCATTTCCTGGCGTGGCCTAATGGTCACCAAAGCGA
TGCACCAACTCCTCCACTCCGTATCCTGGGGTCCACTCGACGTTCTCTTC
CTCGACTTGCCCCCGGGCACCGGCGACGTGCAACTCACCATCAACCAGGA
AATTATCCTCGATGGGGCAGTGATCGTGACCACGCCGCAGGATATCGCGC
TACGGGATGCGGTGCGCGGAATTGGCATGTTCCAGCGCATGGATGTGCCG
GTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGCGTGCCCGGAGTGTGG
GACGCAGACGAAGATCTTTTCGCAGGGGAGGCATGTCCATGAGGGGGCGG
ATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTCGGTGTTGGGTTTTTGGGT
GATGTGCCGCTGGATGCGAGGGTTTGTGAGGATGCGGACCGCGGGGTGCC
GAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGGTTAGGAGGA
AGGCGTTTTTGGATGTTGCGGAGCAGGTTGCGAAGAAGGTGGGAATTGAG
TGGTAAATGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCA
TGAGAACCCACTGGGCCTCCCTCGCTCCGGTACGCCGCCGTCTCTCCGAA
GTCGTCGCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAGAAGGTT
ATTGCTGTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGATAGCGGT
CAACCTCGCTCTCGCCTTCGCCCGCCGCGGCATTCGCACCGGCATCCTCG
ACACCGACATCTTCGGTCCATCCATTCCAACCCTGTTGAATCTATCCGGC
GAGCCTAGATTAGACGATAAAAACTGCCTCCTCCCCCTAACCAACTACGG
CCTCAAATCCATGTCCATGGGCTACCTCCTCCCCAGCACCCAACCACCCC
CGAACACCGATCCGACCGAGCGAGCCCCCATGGACCCGACCCCCATTTCC
TGGCGTGGCCTAATGGTCACCAAAGCGATGCACCAACTCCTCCACTCCGT
ATCCTGGGGTCCACTCGACGTTCTCTTCCTCGACTTGCCCCCGGGCACCG
GCGACGTGCAACTCACCATCAACCAGGAAATTATCCTCGATGGGGCAGTG
ATCGTGACCACGCCGCAGGATATCGCGCTACGGGATGCGGTGCGCGGAAT
TGGCATGTTCCAGCGCATGGATGTGCCGGTGCTGGGGATGGTGAGGAATA
TGGCGTTCTTTGCGTGCCCGGAGTGTGGGACGCAGACGAAGATCTTTTCG
CAGGGGAGGCATGTCCATGAGGGGGCGGATTGGGGGGTTGAGGCCGAGTG
TAGGAGGCTCGGTGTTGGGTTTTTGGGTGATGTGCCGCTGGATGCGAGGG
TTTGTGAGGATGCGGACCGCGGGGTGCCGAGTGTGGTTGCTGAGGAGGGG
AAGGAGGGCAAGGAGGGGGTTAGGAGGAAGGCGTTTTTGGATGTTGCGGA
GCAGGTTGCGAAGAAGGTGGGAATTGAGTGGTAAATGTTGGGGAAGAGAT
TGTTCTCCACGTTTCGGAGCTTGCAGCATGAGAACCCACTGGGCCTCCCT
CGCTCCGGTACGCCGCCGTCTCTCCGAAGTCGTCGCGGTCTCCCCGAGAA
GCGCAAGATCCGCGATGTGAAGAAGGTTATTGCTGTGTCTTCGGCGAAGG
GCGGTGTTGGGAAGTCGACGATAGCGGTCAACCTCGCTCTCGCCTTCGCC
CGCCGCGGCATTCGCACCGGCATCCTCGACACCGACATCTTCGGTCCATC
CATTCCAACCCTGTTGAATCTATCCGGCGAGCCTAGATTAGACGATAAAA
ACTGCCTCCTCCCCCTAACCAACTACGGCCTCAAATCCATGTCCATGGGC
TACCTCCTCCCCAGCACCCAACCACCCCCGAACACCGATCCGACCGAGCG
AGCCCCCATGGACCCGACCCCCATTTCCTGGCGTGGCCTAATGGTCACCA
AAGCGATGCACCAACTCCTCCACTCCGTATCCTGGGGTCCACTCGACGTT
CTCTTCCTCGACTTGCCCCCGGGCACCGGCGACGTGCAACTCACCATCAA
CCAGGAAATTATCCTCGATGGGGCAGTGATCGTGACCACGCCGCAGGATA
TCGCGCTACGGGATGCGGTGCGCGGAATTGGCATGTTCCAGCGCATGGAT
GTGCCGGTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGCGTGCCCGGA
GTGTGGGACGCAGACGAAGATCTTTTCGCAGGGGAGGCATGTCCATGAGG
GGGCGGATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTCGGTGTTGGGTTT
TTGGGTGATGTGCCGCTGGATGCGAGGGTTTGTGAGGATGCGGACCGCGG
GGTGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGGTTA
GGAGGAAGGCGTTTTTGGATGTTGCGGAGCAGGTTGCGAAGAAGGTGGGA
ATTGAGTGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007113CBS51388_007113Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007113-T1.exon1CBS51388_007113-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007113-T1.exon2CBS51388_007113-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007113-T1.exon3CBS51388_007113-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007113-T1.exon4CBS51388_007113-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007113-T1.cdsCBS51388_007113-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007113-T1CBS51388_007113-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR033756
DBxrefPFAM:PF10609
DBxrefPFAM:PF01656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1837445..1838604 +
Powered by Drupal