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CBS51388_007235-T1, CBS51388_007235-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007235-T1
Unique NameCBS51388_007235-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2228904..2229994-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007235-T1 ID=CBS51388_007235-T1|Name=CBS51388_007235-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1091bp|location=Sequence derived from alignment at An11:2228904..2229994- (Aspergillus niger CBS 513.88)
ATGTCTGCTGTCAACGAGAACAACCTGGAGGGCGTGAGTGAGACTGTCCT
CACCCTCCGCAAGGTTGTTGTCAATGAATCCGAGCCCCTCGCGCGCCGCT
TCCGGGCCCTCTTTTCTCTCAAGTACCTGGCGTGCCTGCAGCCTCCGTCC
GAGGACACCCTTCCCGCTATTGAGGCCATCGCTGCCGCTTTCTCATCCAA
GTCGGCTTTGTTGAAGCATGAGCTTGCCTACTGTCTTGGTCAGACTCGCA
ACCCTGACGCTGTCGCGTTCCTTCAGCAGGTTCTGAAGGATAAGGAGGAG
GATGTTATGTGCCGTCATGAGGCCGCTGAGGCCCTAGGTGCTCTGGGCTA
CGAGGACAGTCTGGAGATTCTCAAGGCACTGAAGGATGATGAGAATGAGC
CCGAGGTCATTCGGGAGACTTGCGACATCGCCGTGGATCGTATCGTGTGG
GAGAACTCCGAAGCCAGGAAGGCTGAGAAGTTGAAGCCTAGGTATGACCT
TACTTTTCTTGTCGCAGCCAAGTCATTCGGATTGCATGCTAATTGAGTGC
TTCTATATGATATAGTGACTTCACCTCCATCGACCCCGCCCCACCAATGC
CCCTGGAAGCCGCAGAACCCTCTATTCCTGAGCTGGAGAAGACATTGCTG
GACACCAAGCTTCCTCTCTTCCAAAGATACCGTGCCATGTTTGCCCTGCG
CGACCTCGCCTCGCCTCCTGATCTGCCCACCGCCGTTCAGGCCGTCGATG
CGCTCGCCAAGGGTCTCAAGGACCCCTCTGCGCTGTTCCGCCACGAGGTC
GCATTCGTTTTCGGTCAACTTTGCCACCCCGCATCCGTCCCTAGTCTCAC
CGAGTGTCTGAGCAACCAAGAAGAAGCTGGTATGGTGCGCCACGAAGCTG
CCGAGGCCCTCGGTAGCTTGGGTGACGTTGAGGGTGTCGAGGATACCCTG
AAGAAGTTCTTGAACGACCCCGAGCAGGTTGTCCGGGACAGCATTATCGT
GGCTCTTGATATGGCCGAGTTTGAGAAGAACGGAGAGATGGAGTATGCGC
TGGTGCCGGACTCTGGTGCCCCTGCTGCCGTGTCTGCTTGA
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Coding sequence (CDS) from alignment at An11:2228904..2229994-

>CBS51388_007235-T1 ID=CBS51388_007235-T1|Name=CBS51388_007235-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2034bp|location=Sequence derived from alignment at An11:2228904..2229994- (Aspergillus niger CBS 513.88)
TGACTTCACCTCCATCGACCCCGCCCCACCAATGCCCCTGGAAGCCGCAG
AACCCTCTATTCCTGAGCTGGAGAAGACATTGCTGGACACCAAGCTTCCT
CTCTTCCAAAGATACCGTGCCATGTTTGCCCTGCGCGACCTCGCCTCGCC
TCCTGATCTGCCCACCGCCGTTCAGGCCGTCGATGCGCTCGCCAAGGGTC
TCAAGGACCCCTCTGCGCTGTTCCGCCACGAGGTCGCATTCGTTTTCGGT
CAACTTTGCCACCCCGCATCCGTCCCTAGTCTCACCGAGTGTCTGAGCAA
CCAAGAAGAAGCTGGTATGGTGCGCCACGAAGCTGCCGAGGCCCTCGGTA
GCTTGGGTGACGTTGAGGGTGTCGAGGATACCCTGAAGAAGTTCTTGAAC
GACCCCGAGCAGGTTGTCCGGGACAGCATTATCGTGGCTCTTGATATGGC
CGAGTTTGAGAAGAACGGAGAGATGGAGTATGCGCTGGTGCCGGACTCTG
GTGCCCCTGCTGCCGTGTCTGCTTGAATGTCTGCTGTCAACGAGAACAAC
CTGGAGGGCGTGAGTGAGACTGTCCTCACCCTCCGCAAGGTTGTTGTCAA
TGAATCCGAGCCCCTCGCGCGCCGCTTCCGGGCCCTCTTTTCTCTCAAGT
ACCTGGCGTGCCTGCAGCCTCCGTCCGAGGACACCCTTCCCGCTATTGAG
GCCATCGCTGCCGCTTTCTCATCCAAGTCGGCTTTGTTGAAGCATGAGCT
TGCCTACTGTCTTGGTCAGACTCGCAACCCTGACGCTGTCGCGTTCCTTC
AGCAGGTTCTGAAGGATAAGGAGGAGGATGTTATGTGCCGTCATGAGGCC
GCTGAGGCCCTAGGTGCTCTGGGCTACGAGGACAGTCTGGAGATTCTCAA
GGCACTGAAGGATGATGAGAATGAGCCCGAGGTCATTCGGGAGACTTGCG
ACATCGCCGTGGATCGTATCGTGTGGGAGAACTCCGAAGCCAGGAAGGCT
GAGAAGTTGAAGCCTAGTGACTTCACCTCCATCGACCCCGCCCCACCAAT
GCCCCTGGAAGCCGCAGAACCCTCTATTCCTGAGCTGGAGAAGACATTGC
TGGACACCAAGCTTCCTCTCTTCCAAAGATACCGTGCCATGTTTGCCCTG
CGCGACCTCGCCTCGCCTCCTGATCTGCCCACCGCCGTTCAGGCCGTCGA
TGCGCTCGCCAAGGGTCTCAAGGACCCCTCTGCGCTGTTCCGCCACGAGG
TCGCATTCGTTTTCGGTCAACTTTGCCACCCCGCATCCGTCCCTAGTCTC
ACCGAGTGTCTGAGCAACCAAGAAGAAGCTGGTATGGTGCGCCACGAAGC
TGCCGAGGCCCTCGGTAGCTTGGGTGACGTTGAGGGTGTCGAGGATACCC
TGAAGAAGTTCTTGAACGACCCCGAGCAGGTTGTCCGGGACAGCATTATC
GTGGCTCTTGATATGGCCGAGTTTGAGAAGAACGGAGAGATGGAGTATGC
GCTGGTGCCGGACTCTGGTGCCCCTGCTGCCGTGTCTGCTTGAATGTCTG
CTGTCAACGAGAACAACCTGGAGGGCGTGAGTGAGACTGTCCTCACCCTC
CGCAAGGTTGTTGTCAATGAATCCGAGCCCCTCGCGCGCCGCTTCCGGGC
CCTCTTTTCTCTCAAGTACCTGGCGTGCCTGCAGCCTCCGTCCGAGGACA
CCCTTCCCGCTATTGAGGCCATCGCTGCCGCTTTCTCATCCAAGTCGGCT
TTGTTGAAGCATGAGCTTGCCTACTGTCTTGGTCAGACTCGCAACCCTGA
CGCTGTCGCGTTCCTTCAGCAGGTTCTGAAGGATAAGGAGGAGGATGTTA
TGTGCCGTCATGAGGCCGCTGAGGCCCTAGGTGCTCTGGGCTACGAGGAC
AGTCTGGAGATTCTCAAGGCACTGAAGGATGATGAGAATGAGCCCGAGGT
CATTCGGGAGACTTGCGACATCGCCGTGGATCGTATCGTGTGGGAGAACT
CCGAAGCCAGGAAGGCTGAGAAGTTGAAGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008612peptidyl-lysine modification to peptidyl-hypusine
Vocabulary: Molecular Function
TermDefinition
GO:0019135deoxyhypusine monooxygenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LIA1CBS51388_007235Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007235-T1CBS51388_007235-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007235-T1.cdsCBS51388_007235-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007235-T1.exon2CBS51388_007235-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007235-T1.exon1CBS51388_007235-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263JZO
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR021133
DBxrefInterPro:IPR027517
DBxrefInterPro:IPR011989
DBxrefInterPro:IPR004155
DBxrefPFAM:PF03130
DBxrefPFAM:PF13646
Productdeoxyhypusine hydroxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2228904..2229994 -
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