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CBS51388_007295-T1, CBS51388_007295-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007295-T1
Unique NameCBS51388_007295-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2393481..2394734+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007295-T1 ID=CBS51388_007295-T1|Name=CBS51388_007295-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1254bp|location=Sequence derived from alignment at An11:2393481..2394734+ (Aspergillus niger CBS 513.88)
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC
CCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGGAA
CAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAGCTTCGCTTCTACAACAACAACCAATTTACCGACGACCA
GCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGTCGTCCGCACAGGCC
GGAAACATGGTCCGGGACTGATCATTCTCGGTGCGCCATAACCCCATCCA
TTCCAACCTCATAACCATAGACTAACATACAATGATGAAATACAGCACTA
ATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGA
GTGGAAAACGAACTTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCC
CGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGAT
TACCGCCGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCT
GGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGC
CGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATT
AGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAG
GGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGT
GGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTT
TATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGT
TTGGATTGAGGAGACTATGGGTATGTTATTCTTCCTGCTTCAATTTGTCT
TTTCGACTTGGTTTGGCTTTGGCTATGTATTGGGACGAAGAAGCTAATCT
AGGATGCTGGATCAGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCC
AAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCA
CAGCCAGTATATCTTTACTTGGTAAGTTTCTTTCCTCCGTTCCTCGGATG
CTGCATGACTGCATGGCTGCATGGCTGCATGGATCCTGGCTAACGGCTGC
GCAGGTACGGCTTGTCGCTGGCAACCTCCATCATGCTGTGGATGATCATC
CGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTG
GTAG
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Coding sequence (CDS) from alignment at An11:2393481..2394734+

>CBS51388_007295-T1 ID=CBS51388_007295-T1|Name=CBS51388_007295-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4044bp|location=Sequence derived from alignment at An11:2393481..2394734+ (Aspergillus niger CBS 513.88)
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC
CCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGGAA
CAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAGCTTCGCTTCTACAACAACAACCAATTTACCGACGACCA
GCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGTCGTCCGCACAGGCC
GGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC
TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACTT
AATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACCCC
CGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC
GCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCAT
GCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGG
GTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG
GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGG
AGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAATATGT
TTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATT
GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGAC
TATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTC
CTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGCCAGTAT
ATCTTTACTTGGTACGGCTTGTCGCTGGCAACCTCCATCATGCTGTGGAT
GATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAACC
GGAACTGGTAGATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCA
AGAACCACTCCCCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAA
CAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCC
GCCGCACCAACAACACCACCCAGCTTCGCTTCTACAACAACAACCAATTT
ACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCCCAAGTCGT
CCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCC
CCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGG
AAAACGAACTTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCT
GCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACC
GCCGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTG
GGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCT
GGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTC
GGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCG
CTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAA
GAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATT
TCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGG
ATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGC
CAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACC
ACAGCCAGTATATCTTTACTTGGTACGGCTTGTCGCTGGCAACCTCCATC
ATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGT
GCGCCAGAACCGGAACTGGTAGATGCGCTCCCTCCTCTCCGTCCTCTCCC
GGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTGCGC
ACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCAC
GCGCTGCCTCCGCCGCACCAACAACACCACCCAGCTTCGCTTCTACAACA
ACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCC
TCCCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCT
CGCACTAATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAAC
GCCTAGAGTGGAAAACGAACTTAATTGCCAAATTCGAAGACCGGCTAATC
AAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGA
GTTCGATTACCGCCGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGG
AGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTG
GTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGG
GTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGG
AAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGG
GAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGG
AAAGTTTTATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTC
AGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCGATG
GATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCT
CAAGAACAACCACAGCCAGTATATCTTTACTTGGTACGGCTTGTCGCTGG
CAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCT
ACTCGGCGTGTGCGCCAGAACCGGAACTGGTAGATGCGCTCCCTCCTCTC
CGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCT
CAATCCTGCGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGAC
TCCCTCTGCACGCGCTGCCTCCGCCGCACCAACAACACCACCCAGCTTCG
CTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCG
TCGATGCCCCCTCCCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGA
CTGATCATTCTCGCACTAATCCCCATAATCTCCTTCGCCCTCGGAACATG
GCAAATTCAACGCCTAGAGTGGAAAACGAACTTAATTGCCAAATTCGAAG
ACCGGCTAATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCC
GCGATCTCCGAGTTCGATTACCGCCGTGTCGTCGCGACGGGGACGCTGCG
ACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATG
GGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTG
GTGAATCGGGGGTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATAGATT
GAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGG
GATTGTTGAGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTG
CCGGCTGAGGGAAAGTTTTATTTCCCTGATATTGAGCAGATGGCGGAGTT
GACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGG
TTGAGGCGATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCT
GAAGTCAACCTCAAGAACAACCACAGCCAGTATATCTTTACTTGGTACGG
CTTGTCGCTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTC
CCAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007295CBS51388_007295Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007295-T1.exon1CBS51388_007295-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007295-T1.exon2CBS51388_007295-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007295-T1.exon3CBS51388_007295-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007295-T1.exon4CBS51388_007295-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007295-T1.cdsCBS51388_007295-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007295-T1CBS51388_007295-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263V60
DBxrefInterPro:IPR002994
DBxrefPFAM:PF02104
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2393481..2394734 +
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