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CBS51388_007313-T1, CBS51388_007313-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007313-T1
Unique NameCBS51388_007313-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2442939..2444096-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007313-T1 ID=CBS51388_007313-T1|Name=CBS51388_007313-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1158bp|location=Sequence derived from alignment at An11:2442939..2444096- (Aspergillus niger CBS 513.88)
ATGGATGCCACCACTTCACCTCTTCAGCGTGCTTTCAACGCATTCCTCCT
CACAATGCCCCCCCAGCAACTCGAAGAGCTCCTCAGGTATCTTCAGGACA
CCCGAGCCAAGGCCAACAACCAGGTCGCGCACGAAAATGAGCAATCTACT
GCAAGATCGAAACCCCCTCTGGACACCAATAATGAGTCGGCCGTTCAGGG
CAGTACAAACCAACGTTCTCATCAAACGCGAGGCAAGCGACCTCAGGATG
GGAAACGGCGGCCACTGAACAGTTTCATTGCTTTCAGAAGTATTCTATAC
ACTTCCATCTCATGCATGTACATCGGCTAATGATTATTAGGTTATTATTC
AGTCATGTTTCCAGACCTTACTCAGAAAGCGAAGTCGGGCATCCTTCGCT
TCTTGTGGCAGAACGACCCTTTCAAAGCTAAATGGGCCATCGTAGCCAAG
GCATACTCCATCATTCGCGATGACCATGATAATGGAGTCTCCCTTGAAAC
ATTTCTGAAACTCAACACCAACCTCATTGGCATTATCGAGCCGGACCGCT
ACCTTGACATAATGGGCTGGGAGCTGAATGTCGACGGCCAGCAGCAGTAC
ACCATGGCTAAGGTTAAGATTACAGCTACTCCTGAAGCTGAGCTCTCAAC
AAACTATTCAGTCGATGATATTGTCAAAAATTGTTACGATACAGGCTATG
TATCCCGAGACAAATGCAAGAAAAAAACAGACCATAACAAAAACGCGCCT
GTTATGGCTTTCGCTGCCCAGCCAACCTTGATTATCCACGAAAATAACAG
TATTCAAATTAATGGAAATAATACTGTTGTTACTGGTGACTGCGATGGGA
ATGCTGCTGTAGAAAGCACATTTCCCCAGAACTTCTCACCAAGTCCTGGT
GACATGGGAACGATGCTTGCAGAAGCATCGCTTGGTGAATCTGAAGTACT
TCACGGCCGTGGTTACCAACTCTATGAGCGGGGGCCTATAGTTGCAAACG
AATATGAGATTGACGACGGGATGCTCAATCTTTGGGGTGAAAACCCAGCT
ATGTTACCATCATATGTTTCAGCCGGCCAATGTACACTTCCCCCGCATGA
TCCTTGTGTCCCGGATCCGATGGCGAATATCAATATCGACCATTACCTCA
ACCTATGA
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Coding sequence (CDS) from alignment at An11:2442939..2444096-

>CBS51388_007313-T1 ID=CBS51388_007313-T1|Name=CBS51388_007313-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2214bp|location=Sequence derived from alignment at An11:2442939..2444096- (Aspergillus niger CBS 513.88)
GTTATTATTCAGTCATGTTTCCAGACCTTACTCAGAAAGCGAAGTCGGGC
ATCCTTCGCTTCTTGTGGCAGAACGACCCTTTCAAAGCTAAATGGGCCAT
CGTAGCCAAGGCATACTCCATCATTCGCGATGACCATGATAATGGAGTCT
CCCTTGAAACATTTCTGAAACTCAACACCAACCTCATTGGCATTATCGAG
CCGGACCGCTACCTTGACATAATGGGCTGGGAGCTGAATGTCGACGGCCA
GCAGCAGTACACCATGGCTAAGGTTAAGATTACAGCTACTCCTGAAGCTG
AGCTCTCAACAAACTATTCAGTCGATGATATTGTCAAAAATTGTTACGAT
ACAGGCTATGTATCCCGAGACAAATGCAAGAAAAAAACAGACCATAACAA
AAACGCGCCTGTTATGGCTTTCGCTGCCCAGCCAACCTTGATTATCCACG
AAAATAACAGTATTCAAATTAATGGAAATAATACTGTTGTTACTGGTGAC
TGCGATGGGAATGCTGCTGTAGAAAGCACATTTCCCCAGAACTTCTCACC
AAGTCCTGGTGACATGGGAACGATGCTTGCAGAAGCATCGCTTGGTGAAT
CTGAAGTACTTCACGGCCGTGGTTACCAACTCTATGAGCGGGGGCCTATA
GTTGCAAACGAATATGAGATTGACGACGGGATGCTCAATCTTTGGGGTGA
AAACCCAGCTATGTTACCATCATATGTTTCAGCCGGCCAATGTACACTTC
CCCCGCATGATCCTTGTGTCCCGGATCCGATGGCGAATATCAATATCGAC
CATTACCTCAACCTATGAATGGATGCCACCACTTCACCTCTTCAGCGTGC
TTTCAACGCATTCCTCCTCACAATGCCCCCCCAGCAACTCGAAGAGCTCC
TCAGGTATCTTCAGGACACCCGAGCCAAGGCCAACAACCAGGTCGCGCAC
GAAAATGAGCAATCTACTGCAAGATCGAAACCCCCTCTGGACACCAATAA
TGAGTCGGCCGTTCAGGGCAGTACAAACCAACGTTCTCATCAAACGCGAG
GCAAGCGACCTCAGGATGGGAAACGGCGGCCACTGAACAGTTTCATTGCT
TTCAGAAGTTATTATTCAGTCATGTTTCCAGACCTTACTCAGAAAGCGAA
GTCGGGCATCCTTCGCTTCTTGTGGCAGAACGACCCTTTCAAAGCTAAAT
GGGCCATCGTAGCCAAGGCATACTCCATCATTCGCGATGACCATGATAAT
GGAGTCTCCCTTGAAACATTTCTGAAACTCAACACCAACCTCATTGGCAT
TATCGAGCCGGACCGCTACCTTGACATAATGGGCTGGGAGCTGAATGTCG
ACGGCCAGCAGCAGTACACCATGGCTAAGGTTAAGATTACAGCTACTCCT
GAAGCTGAGCTCTCAACAAACTATTCAGTCGATGATATTGTCAAAAATTG
TTACGATACAGGCTATGTATCCCGAGACAAATGCAAGAAAAAAACAGACC
ATAACAAAAACGCGCCTGTTATGGCTTTCGCTGCCCAGCCAACCTTGATT
ATCCACGAAAATAACAGTATTCAAATTAATGGAAATAATACTGTTGTTAC
TGGTGACTGCGATGGGAATGCTGCTGTAGAAAGCACATTTCCCCAGAACT
TCTCACCAAGTCCTGGTGACATGGGAACGATGCTTGCAGAAGCATCGCTT
GGTGAATCTGAAGTACTTCACGGCCGTGGTTACCAACTCTATGAGCGGGG
GCCTATAGTTGCAAACGAATATGAGATTGACGACGGGATGCTCAATCTTT
GGGGTGAAAACCCAGCTATGTTACCATCATATGTTTCAGCCGGCCAATGT
ACACTTCCCCCGCATGATCCTTGTGTCCCGGATCCGATGGCGAATATCAA
TATCGACCATTACCTCAACCTATGAATGGATGCCACCACTTCACCTCTTC
AGCGTGCTTTCAACGCATTCCTCCTCACAATGCCCCCCCAGCAACTCGAA
GAGCTCCTCAGGTATCTTCAGGACACCCGAGCCAAGGCCAACAACCAGGT
CGCGCACGAAAATGAGCAATCTACTGCAAGATCGAAACCCCCTCTGGACA
CCAATAATGAGTCGGCCGTTCAGGGCAGTACAAACCAACGTTCTCATCAA
ACGCGAGGCAAGCGACCTCAGGATGGGAAACGGCGGCCACTGAACAGTTT
CATTGCTTTCAGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0007531mating type determination
GO:0045895positive regulation of mating-type specific transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008301DNA binding, bending
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007313CBS51388_007313Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007313-T1CBS51388_007313-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007313-T1.cdsCBS51388_007313-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007313-T1.exon2CBS51388_007313-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007313-T1.exon1CBS51388_007313-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR006856
DBxrefPFAM:PF04769
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2442939..2444096 -
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