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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:86711..88038- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007426-T1 ID=CBS51388_007426-T1|Name=CBS51388_007426-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1328bp|location=Sequence derived from alignment at An12:86711..88038- (Aspergillus niger CBS 513.88)
ATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCA
GCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAG
CCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCAGTATGC
CTTATCCCGTATTATTCGAAAAGTGAGATTTTTGGTCAGGTTCCATTGTT
GACCATGACTATAGGTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATG
GAAATGAATGGTGAGCTGCACCACTGCGGTGACTTGCAACTTAGGCTGAC
ATATAATGGATAATACTAGGTCATTCTGGTGAAGTTTTTGCGGTGCGGTT
TGATCCCACTGCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATCT
GTACGTGTTTCCTTTTATATAATAGTGTCTAGAGGGTGCAGGCTAATCAC
ACCGTCTACAACAGTGCTTTGGAACACATATGGACAGTGCGAGAACTATG
GTGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGC
GACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACTCGCTAGCTG
GGATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGCACGAGGAGA
TTATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGC
GCAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGC
TATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGG
AGGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACTATCCATGCT
TGGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGGACACACGGA
AACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCA
ACTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCG
GCAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAA
GAACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGG
GTAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATC
CTATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTC
ACCGAACAATGAGCCCATCAGTAAGTTACACCGGGTTTTGGAATATTCGT
TGGAAATACTAATATCCGTCTACAGTCGTCTCGGGATCGTCCGATAGAAC
GCTCATGCTCGGTGAACTTGGCAAGTGA back to topCoding sequence (CDS) from alignment at An12:86711..88038- >CBS51388_007426-T1 ID=CBS51388_007426-T1|Name=CBS51388_007426-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5400bp|location=Sequence derived from alignment at An12:86711..88038- (Aspergillus niger CBS 513.88)
TCGTCTCGGGATCGTCCGATAGAACGCTCATGCTCGGTGAACTTGGCAAG
TGATGCTTTGGAACACATATGGACAGTGCGAGAACTATGGTGCGCTATCA
GGTCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGCGACTCCAGAAC
GTTATTTTCCGCATCGGCCGACATGACACTCGCTAGCTGGGATCTCGAAA
CCGGACAAAGAATACGCCGGCACATTGGGCACGAGGAGATTATCAATTGT
CTAGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGCGCAAGTGACGA
CGGCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGCTATCGAATATT
TGGAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGGAGGCAGGTAAC
GAGATCTACAGTGGTGGTATCGATAACACTATCCATGCTTGGGATCTACG
GAAGAAGAGCATCGTCTACTCCATGGCTGGACACACGGAAACCATCACCT
CTCTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCAACTCACACGAC
TCGACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCGGCAAATCGACA
CGTCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAAGAACCTCATCC
GGGCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGGGTAGTGGTGAC
AGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATCCTATACAAGCT
CCCTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTCACCGAACAATG
AGCCCATCAGTCATTCTGGTGAAGTTTTTGCGGTGCGGTTTGATCCCACT
GCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATCTGTTCCCCGCA
CCAGCGGGCTTCAAGCACCGATTATGGAAATGAATGATGTCGGGGGAAAA
GCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCAGCTTGTCGTCAAGC
GAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAGCCATCGTCCAAAGC
TCGTCCCAAAATGGAGCTTTGATCCAATCATCGTCTCGGGATCGTCCGAT
AGAACGCTCATGCTCGGTGAACTTGGCAAGTGATGCTTTGGAACACATAT
GGACAGTGCGAGAACTATGGTGCGCTATCAGGTCACCGAGGAGCAGTTCT
TGACCTTCAATGGTCGCGCGACTCCAGAACGTTATTTTCCGCATCGGCCG
ACATGACACTCGCTAGCTGGGATCTCGAAACCGGACAAAGAATACGCCGG
CACATTGGGCACGAGGAGATTATCAATTGTCTAGACATAAGCAAAAGAGG
CCAGGAATTGCTGGTTAGCGCAAGTGACGACGGCTGCATAGGCATCTGGG
ATCCCCGGCAAAAGGATGCTATCGAATATTTGGAAACCGAGTTGCCCATC
ACGGCAGTGGCGCTTTCGGAGGCAGGTAACGAGATCTACAGTGGTGGTAT
CGATAACACTATCCATGCTTGGGATCTACGGAAGAAGAGCATCGTCTACT
CCATGGCTGGACACACGGAAACCATCACCTCTCTCGAAATTTCGCCGGAC
TCGCAAACTCTTCTTTCCAACTCACACGACTCGACCGTACGCACGTGGGA
TATCCGGCCGTTCGCGCCGGCAAATCGACACGTCAGGACGTTTGACGGTG
CGCCGGTCGGTTTGGAGAAGAACCTCATCCGGGCCAGTTGGGACCCGAGT
GGGGAGAAGATTGCGGCGGGTAGTGGTGACAGGAGTGTTGTGGTCTGGAA
CTCGAAGTCCGGCAAAATCCTATACAAGCTCCCTGGACATAAGGGGACCG
TCAATGACGTCCGGTTTTCACCGAACAATGAGCCCATCAGTCATTCTGGT
GAAGTTTTTGCGGTGCGGTTTGATCCCACTGCTCAGCACATTGCTTCAGG
CTCCATGGATCGATCTATCTGTTCCCCGCACCAGCGGGCTTCAAGCACCG
ATTATGGAAATGAATGATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCT
TTGGCTCATCGAACCAGCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGT
CTCAATGATAGCACAGCCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTT
GATCCAATCATCGTCTCGGGATCGTCCGATAGAACGCTCATGCTCGGTGA
ACTTGGCAAGTGATGCTTTGGAACACATATGGACAGTGCGAGAACTATGG
TGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAATGGTCGCGCG
ACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACTCGCTAGCTGG
GATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGCACGAGGAGAT
TATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTGCTGGTTAGCG
CAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCAAAAGGATGCT
ATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGGCGCTTTCGGA
GGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACTATCCATGCTT
GGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGGACACACGGAA
ACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTCTTCTTTCCAA
CTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCGTTCGCGCCGG
CAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGGTTTGGAGAAG
AACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGATTGCGGCGGG
TAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCCGGCAAAATCC
TATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGTCCGGTTTTCA
CCGAACAATGAGCCCATCAGTCATTCTGGTGAAGTTTTTGCGGTGCGGTT
TGATCCCACTGCTCAGCACATTGCTTCAGGCTCCATGGATCGATCTATCT
GTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATGGAAATGAATGATGT
CGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATCGAACCAGCTT
GTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATAGCACAGCCAT
CGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCATCGTCTCGGG
ATCGTCCGATAGAACGCTCATGCTCGGTGAACTTGGCAAGTGATGCTTTG
GAACACATATGGACAGTGCGAGAACTATGGTGCGCTATCAGGTCACCGAG
GAGCAGTTCTTGACCTTCAATGGTCGCGCGACTCCAGAACGTTATTTTCC
GCATCGGCCGACATGACACTCGCTAGCTGGGATCTCGAAACCGGACAAAG
AATACGCCGGCACATTGGGCACGAGGAGATTATCAATTGTCTAGACATAA
GCAAAAGAGGCCAGGAATTGCTGGTTAGCGCAAGTGACGACGGCTGCATA
GGCATCTGGGATCCCCGGCAAAAGGATGCTATCGAATATTTGGAAACCGA
GTTGCCCATCACGGCAGTGGCGCTTTCGGAGGCAGGTAACGAGATCTACA
GTGGTGGTATCGATAACACTATCCATGCTTGGGATCTACGGAAGAAGAGC
ATCGTCTACTCCATGGCTGGACACACGGAAACCATCACCTCTCTCGAAAT
TTCGCCGGACTCGCAAACTCTTCTTTCCAACTCACACGACTCGACCGTAC
GCACGTGGGATATCCGGCCGTTCGCGCCGGCAAATCGACACGTCAGGACG
TTTGACGGTGCGCCGGTCGGTTTGGAGAAGAACCTCATCCGGGCCAGTTG
GGACCCGAGTGGGGAGAAGATTGCGGCGGGTAGTGGTGACAGGAGTGTTG
TGGTCTGGAACTCGAAGTCCGGCAAAATCCTATACAAGCTCCCTGGACAT
AAGGGGACCGTCAATGACGTCCGGTTTTCACCGAACAATGAGCCCATCAG
TCATTCTGGTGAAGTTTTTGCGGTGCGGTTTGATCCCACTGCTCAGCACA
TTGCTTCAGGCTCCATGGATCGATCTATCTGTTCCCCGCACCAGCGGGCT
TCAAGCACCGATTATGGAAATGAATGATGTCGGGGGAAAAGCGACCTGCG
CAAGAAGCCTTTGGCTCATCGAACCAGCTTGTCGTCAAGCGAAAGAAGTC
CGACGCCGGTCTCAATGATAGCACAGCCATCGTCCAAAGCTCGTCCCAAA
ATGGAGCTTTGATCCAATCATCGTCTCGGGATCGTCCGATAGAACGCTCA
TGCTCGGTGAACTTGGCAAGTGATGCTTTGGAACACATATGGACAGTGCG
AGAACTATGGTGCGCTATCAGGTCACCGAGGAGCAGTTCTTGACCTTCAA
TGGTCGCGCGACTCCAGAACGTTATTTTCCGCATCGGCCGACATGACACT
CGCTAGCTGGGATCTCGAAACCGGACAAAGAATACGCCGGCACATTGGGC
ACGAGGAGATTATCAATTGTCTAGACATAAGCAAAAGAGGCCAGGAATTG
CTGGTTAGCGCAAGTGACGACGGCTGCATAGGCATCTGGGATCCCCGGCA
AAAGGATGCTATCGAATATTTGGAAACCGAGTTGCCCATCACGGCAGTGG
CGCTTTCGGAGGCAGGTAACGAGATCTACAGTGGTGGTATCGATAACACT
ATCCATGCTTGGGATCTACGGAAGAAGAGCATCGTCTACTCCATGGCTGG
ACACACGGAAACCATCACCTCTCTCGAAATTTCGCCGGACTCGCAAACTC
TTCTTTCCAACTCACACGACTCGACCGTACGCACGTGGGATATCCGGCCG
TTCGCGCCGGCAAATCGACACGTCAGGACGTTTGACGGTGCGCCGGTCGG
TTTGGAGAAGAACCTCATCCGGGCCAGTTGGGACCCGAGTGGGGAGAAGA
TTGCGGCGGGTAGTGGTGACAGGAGTGTTGTGGTCTGGAACTCGAAGTCC
GGCAAAATCCTATACAAGCTCCCTGGACATAAGGGGACCGTCAATGACGT
CCGGTTTTCACCGAACAATGAGCCCATCAGTCATTCTGGTGAAGTTTTTG
CGGTGCGGTTTGATCCCACTGCTCAGCACATTGCTTCAGGCTCCATGGAT
CGATCTATCTGTTCCCCGCACCAGCGGGCTTCAAGCACCGATTATGGAAA
TGAATGATGTCGGGGGAAAAGCGACCTGCGCAAGAAGCCTTTGGCTCATC
GAACCAGCTTGTCGTCAAGCGAAAGAAGTCCGACGCCGGTCTCAATGATA
GCACAGCCATCGTCCAAAGCTCGTCCCAAAATGGAGCTTTGATCCAATCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:86711..88038 - |
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