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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:399072..400637- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007517-T1 ID=CBS51388_007517-T1|Name=CBS51388_007517-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1566bp|location=Sequence derived from alignment at An12:399072..400637- (Aspergillus niger CBS 513.88)
ATGAAACTCGACCACCTCCCCGTGGAGCTAATTCTCCAAATTGTTCCCTT
CCTAAAGAAACATGATTATGCGCAACTAGTGCTGGTTTGCAAGTCCTGGT
ACTCCCTATTCATCCCCCATCTATACCACCATGTTGTGCTTCCCTTGAAC
CATTACTGTGGTTTCGGATATGGTCACAAGCGCTATAGCAAGGATCTTCC
TGTGCGTCGGTTCACCTTGGCTCTGCTTGAGAATCCAACCCTTGCTCCCT
TGATCCACTTTCTGCAGCTTTATCCTAGTGATTGTGAGGGGAAATGGCAG
AATCGGCCTCCGCTAAAGCCGGTGGCTGAAGAAAAATACCTCCCTTTCAT
GCTGCCCTATGGCGATGCTAAGCGCAAACATCGTCGCAAGTTCCATGCAT
GGCGCCGAGATCTTAGACACAGATCCGAGCGACAGGACTGGTATCGGAAA
TACCGATACGAAGATGCCTGGCTAGCCTTGCTCATGGTACAAGTCAAGAA
CCTCGAGACGTTCGCCATCCAATTACCCGAAGAGTGGGACCACATTGTTG
ACGAAGGAGAACCCCTACTCAAAAACTCTGTCCACTTTGAACGTGTCATT
CAATGGGCTAGTAACCCGAAGCTGGGCATTCTCACGTACCTAAAGCACAT
TTCGTTGAGGGATGGCCCAGATTTCTGGGAATATCGGACTTCCGTAGGCG
CAGTTCCCATGAACCGGCTGCTTCCTTATCTCCGGATTCCGTCACTGCGA
AAGCTTTATGTGCATAATGTGTGTGATCGATCCCGATTCCACATGCCTAA
AAGTTTGGTTCTTCCACTGACCCATCTGGATCTTATGGCAAATGATGATG
ACCTGCCTAATCTCCCCAGCCTGCTGGAAAGGTGCCCGAACCTGCAGTCA
TTCACCCTTGAAGTGGGCGACGGGACGGCGAATCATACTCACCAATACCT
GAATCACTCGCGCCTATACCAGCCCTTGCGACGATCTCAATTGTCGTTGC
GTTACCTGAACCTAATTTTCCTGAGCGACCGGACCTGGCAGGATGCCGAA
ATCCCAAGCCCTATCTTCTTCGGGAGCCTGACTGAGTTTCGTAATCTCCA
GACCATCCATATGCGGTGGAGTAGCTTGTTGCCGTTTCTCGGGAGCGGTT
CCTACGATCCCGAGAAATCTCTTCGGGAGCTGCTTCCTTGCTCTCTGCAA
TATCTCTTCATTCACGATTGCTTGATCCAATCCTCGTTGGCCTTGTGCAG
GGAACTCGAAACCCTGGAGATACACTATTTCGAGGCCGTCCCTTTGCTCA
AGGCGCTATATCTTGAGTATGCTGTTAGAGAGCAAGCACCAGGACAGGGG
TGTATGAAGTGTGTTAGCGGTCATTGGTCCAACTATCGAATGATGGAAAC
AGACCCCGTCATCGATCGCCGTCTACTGGACTTGCAAGGGAAATTCCGTA
CGTTGGGCGTGGACTTCCGGATTATCGAACCAGGAGCCACGGCGAAACCT
TTCCCTCTAGACGGTGCGATCAGGACGAAGTGGCCTTGGGAGACTTTTGA
TGGAGTTTTGATGTAG back to topCoding sequence (CDS) from alignment at An12:399072..400637- >CBS51388_007517-T1 ID=CBS51388_007517-T1|Name=CBS51388_007517-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1566bp|location=Sequence derived from alignment at An12:399072..400637- (Aspergillus niger CBS 513.88)
ATGAAACTCGACCACCTCCCCGTGGAGCTAATTCTCCAAATTGTTCCCTT
CCTAAAGAAACATGATTATGCGCAACTAGTGCTGGTTTGCAAGTCCTGGT
ACTCCCTATTCATCCCCCATCTATACCACCATGTTGTGCTTCCCTTGAAC
CATTACTGTGGTTTCGGATATGGTCACAAGCGCTATAGCAAGGATCTTCC
TGTGCGTCGGTTCACCTTGGCTCTGCTTGAGAATCCAACCCTTGCTCCCT
TGATCCACTTTCTGCAGCTTTATCCTAGTGATTGTGAGGGGAAATGGCAG
AATCGGCCTCCGCTAAAGCCGGTGGCTGAAGAAAAATACCTCCCTTTCAT
GCTGCCCTATGGCGATGCTAAGCGCAAACATCGTCGCAAGTTCCATGCAT
GGCGCCGAGATCTTAGACACAGATCCGAGCGACAGGACTGGTATCGGAAA
TACCGATACGAAGATGCCTGGCTAGCCTTGCTCATGGTACAAGTCAAGAA
CCTCGAGACGTTCGCCATCCAATTACCCGAAGAGTGGGACCACATTGTTG
ACGAAGGAGAACCCCTACTCAAAAACTCTGTCCACTTTGAACGTGTCATT
CAATGGGCTAGTAACCCGAAGCTGGGCATTCTCACGTACCTAAAGCACAT
TTCGTTGAGGGATGGCCCAGATTTCTGGGAATATCGGACTTCCGTAGGCG
CAGTTCCCATGAACCGGCTGCTTCCTTATCTCCGGATTCCGTCACTGCGA
AAGCTTTATGTGCATAATGTGTGTGATCGATCCCGATTCCACATGCCTAA
AAGTTTGGTTCTTCCACTGACCCATCTGGATCTTATGGCAAATGATGATG
ACCTGCCTAATCTCCCCAGCCTGCTGGAAAGGTGCCCGAACCTGCAGTCA
TTCACCCTTGAAGTGGGCGACGGGACGGCGAATCATACTCACCAATACCT
GAATCACTCGCGCCTATACCAGCCCTTGCGACGATCTCAATTGTCGTTGC
GTTACCTGAACCTAATTTTCCTGAGCGACCGGACCTGGCAGGATGCCGAA
ATCCCAAGCCCTATCTTCTTCGGGAGCCTGACTGAGTTTCGTAATCTCCA
GACCATCCATATGCGGTGGAGTAGCTTGTTGCCGTTTCTCGGGAGCGGTT
CCTACGATCCCGAGAAATCTCTTCGGGAGCTGCTTCCTTGCTCTCTGCAA
TATCTCTTCATTCACGATTGCTTGATCCAATCCTCGTTGGCCTTGTGCAG
GGAACTCGAAACCCTGGAGATACACTATTTCGAGGCCGTCCCTTTGCTCA
AGGCGCTATATCTTGAGTATGCTGTTAGAGAGCAAGCACCAGGACAGGGG
TGTATGAAGTGTGTTAGCGGTCATTGGTCCAACTATCGAATGATGGAAAC
AGACCCCGTCATCGATCGCCGTCTACTGGACTTGCAAGGGAAATTCCGTA
CGTTGGGCGTGGACTTCCGGATTATCGAACCAGGAGCCACGGCGAAACCT
TTCCCTCTAGACGGTGCGATCAGGACGAAGTGGCCTTGGGAGACTTTTGA
TGGAGTTTTGATGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR032675 |
| DBxref | PFAM:PF12937 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:399072..400637 - |
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