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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:548710..549379+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007567-T1 ID=CBS51388_007567-T1|Name=CBS51388_007567-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=670bp|location=Sequence derived from alignment at An12:548710..549379+ (Aspergillus niger CBS 513.88)
ATGTTGTTCAGCTTCAAGCCCACTATCCTCCTAGCCCTGGCCCTCACCGC
GGTTGCCAGCCCTATCGCCAACCCGACGGCCGACGAGACCAACACCCTGG
TCGCCCGCGCCCAGATGAAAGATGTCAACTGTAACGGAAAGAAATTCGCC
AAGCAGGACATTTACAACGCAATCCAGCAGGCTAGGAAGGTTCAAACGGC
CAAAGACAACCACGAAACAGGCTATGCAAAATACCCGGAGGAGAATTTCA
ACTTTGAGGGACTCTTTAAAGTCAGCACCACTCTGTATGAGTATCCTTTG
GTCGCAGGGGGAGTTTACAGCGGCAGTAAGTAATCTCTTCATGCTTTTCC
TTTCATTTATGTCTACTGGGGCCGGATTGAAGAGGTGCATGTATGCTAAT
GAGCTTGGAATTGCGACAGAGCTGGGAGTCAATGCAGACAAATACCGCGT
TGTCATGAACGAGAAGTACGGTTATGTTGGGTCATTGTATCACATTACGG
GTAACTCTTTCAAAAAGTGCGATAATATTGAGACCAGTCCTACCACCACC
ACCACTACTACTACTAAGACGACTACCACTGCTACTGCTAAGGCGACTAC
CAAGGCTAGTAGTGGTAAGTCGGGTCACAAGTCTGGTAGCAACTCTCACA
AGAAGGGTGGTAAGAACTAG back to topCoding sequence (CDS) from alignment at An12:548710..549379+ >CBS51388_007567-T1 ID=CBS51388_007567-T1|Name=CBS51388_007567-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1152bp|location=Sequence derived from alignment at An12:548710..549379+ (Aspergillus niger CBS 513.88)
ATGTTGTTCAGCTTCAAGCCCACTATCCTCCTAGCCCTGGCCCTCACCGC
GGTTGCCAGCCCTATCGCCAACCCGACGGCCGACGAGACCAACACCCTGG
TCGCCCGCGCCCAGATGAAAGATGTCAACTGTAACGGAAAGAAATTCGCC
AAGCAGGACATTTACAACGCAATCCAGCAGGCTAGGAAGGTTCAAACGGC
CAAAGACAACCACGAAACAGGCTATGCAAAATACCCGGAGGAGAATTTCA
ACTTTGAGGGACTCTTTAAAGTCAGCACCACTCTGTATGAGTATCCTTTG
GTCGCAGGGGGAGTTTACAGCGGCAAGCTGGGAGTCAATGCAGACAAATA
CCGCGTTGTCATGAACGAGAAGTACGGTTATGTTGGGTCATTGTATCACA
TTACGGGTAACTCTTTCAAAAAGTGCGATAATATTGAGACCAGTCCTACC
ACCACCACCACTACTACTACTAAGACGACTACCACTGCTACTGCTAAGGC
GACTACCAAGGCTAGTAGTGGTAAGTCGGGTCACAAGTCTGGTAGCAACT
CTCACAAGAAGGGTGGTAAGAACTAGATGTTGTTCAGCTTCAAGCCCACT
ATCCTCCTAGCCCTGGCCCTCACCGCGGTTGCCAGCCCTATCGCCAACCC
GACGGCCGACGAGACCAACACCCTGGTCGCCCGCGCCCAGATGAAAGATG
TCAACTGTAACGGAAAGAAATTCGCCAAGCAGGACATTTACAACGCAATC
CAGCAGGCTAGGAAGGTTCAAACGGCCAAAGACAACCACGAAACAGGCTA
TGCAAAATACCCGGAGGAGAATTTCAACTTTGAGGGACTCTTTAAAGTCA
GCACCACTCTGTATGAGTATCCTTTGGTCGCAGGGGGAGTTTACAGCGGC
AAGCTGGGAGTCAATGCAGACAAATACCGCGTTGTCATGAACGAGAAGTA
CGGTTATGTTGGGTCATTGTATCACATTACGGGTAACTCTTTCAAAAAGT
GCGATAATATTGAGACCAGTCCTACCACCACCACCACTACTACTACTAAG
ACGACTACCACTGCTACTGCTAAGGCGACTACCAAGGCTAGTAGTGGTAA
GTCGGGTCACAAGTCTGGTAGCAACTCTCACAAGAAGGGTGGTAAGAACT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0004540 | ribonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.2 |
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR016191 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:548710..549379 + |
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