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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:560100..561161+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007572-T1 ID=CBS51388_007572-T1|Name=CBS51388_007572-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1062bp|location=Sequence derived from alignment at An12:560100..561161+ (Aspergillus niger CBS 513.88)
ATGGCAGCGCAAGAGTACTTCGGTGGCAGCAGTGCCACCCCCGCCAACCC
TGATCGCCGTCAGCAGAACCCCTCTCCTTGGTCATCCCCAGCTGTCGACA
CTCCCAGCTCCACCGGGTACGGCTCGTATCCTCCATCCGTCGAGAACGGC
CAGGACCGATACGGCTCCTCTTCTCCTTACCCCCCTCAGGGCGCTGGTGG
CTACAACCGACCCTACAGCCCGTACCAGCCACACTCGCCTCAACCCGGCT
ACCAGAACCCCGAATACTCATCCTACGGTGGACGCCCACCCTACCCACAG
CACGAGCAGCCTTCGCCATACGGCCAGCCACCCTCTGAGTCCAGACCTTA
CCCGCCTTACCCTCAGCATGAAGGGTACCCTTCCCACCAGCAGCCCCCTC
CCTACTCTCCCGAGTCGTCCACCGACCCCGCCGCAGCCGGTGAAGGCGAT
AAGGGTATCATGGGCGCCCTCGCTGGCGGTGCAGCTGGTGGCTTCGCAGG
ACACAAAGTCAACCACGGCTTCCTCGGCACCATCGGCGGAGCCATGATGG
GCTCGGTAGCCGAAGACGCAGTGAAGAAACACAAGGAGAAGAAAGAGCAC
GAGGAAGAAGAACGTCGTCGCATGGAAGAGCGTCGCAGAATGGAGGAGCA
CTACAGAATGGAAGAACAGCGTCGCAGGGAGGAACAGCAGAGGATGTCTC
AGCAGCATCACCACCGACCTCCTCCGCATCACGGCGCGCCTCTGCGCGGA
AACTTCTCTGCTTCATCCCGGGATATCCGCCTTGAGAGCCACCACGATCT
AGTGGCAGCCTGTGGACGGGTCTCGGGAGAGTTGCAGCTCTCGGTACTTC
CTTTGAATAGTGTGTTGGCTAACCACTGGGGAAAGTTCGCGTGGGAGCGG
AATGGAAACTTTGCTGCGTCGGCTAGGAATGTTCGCTTGGTTGATGGGGG
ACGTGTGCTGGAGGCGGAGTTGGCGGATGGGAACGATGGCTGGAATCGGA
CCTGGATTCGTCTGGATGAGAGGATTACGAACCAGAACGGCCAGCTGATG
TTCCTGGATTAG back to topCoding sequence (CDS) from alignment at An12:560100..561161+ >CBS51388_007572-T1 ID=CBS51388_007572-T1|Name=CBS51388_007572-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1062bp|location=Sequence derived from alignment at An12:560100..561161+ (Aspergillus niger CBS 513.88)
ATGGCAGCGCAAGAGTACTTCGGTGGCAGCAGTGCCACCCCCGCCAACCC
TGATCGCCGTCAGCAGAACCCCTCTCCTTGGTCATCCCCAGCTGTCGACA
CTCCCAGCTCCACCGGGTACGGCTCGTATCCTCCATCCGTCGAGAACGGC
CAGGACCGATACGGCTCCTCTTCTCCTTACCCCCCTCAGGGCGCTGGTGG
CTACAACCGACCCTACAGCCCGTACCAGCCACACTCGCCTCAACCCGGCT
ACCAGAACCCCGAATACTCATCCTACGGTGGACGCCCACCCTACCCACAG
CACGAGCAGCCTTCGCCATACGGCCAGCCACCCTCTGAGTCCAGACCTTA
CCCGCCTTACCCTCAGCATGAAGGGTACCCTTCCCACCAGCAGCCCCCTC
CCTACTCTCCCGAGTCGTCCACCGACCCCGCCGCAGCCGGTGAAGGCGAT
AAGGGTATCATGGGCGCCCTCGCTGGCGGTGCAGCTGGTGGCTTCGCAGG
ACACAAAGTCAACCACGGCTTCCTCGGCACCATCGGCGGAGCCATGATGG
GCTCGGTAGCCGAAGACGCAGTGAAGAAACACAAGGAGAAGAAAGAGCAC
GAGGAAGAAGAACGTCGTCGCATGGAAGAGCGTCGCAGAATGGAGGAGCA
CTACAGAATGGAAGAACAGCGTCGCAGGGAGGAACAGCAGAGGATGTCTC
AGCAGCATCACCACCGACCTCCTCCGCATCACGGCGCGCCTCTGCGCGGA
AACTTCTCTGCTTCATCCCGGGATATCCGCCTTGAGAGCCACCACGATCT
AGTGGCAGCCTGTGGACGGGTCTCGGGAGAGTTGCAGCTCTCGGTACTTC
CTTTGAATAGTGTGTTGGCTAACCACTGGGGAAAGTTCGCGTGGGAGCGG
AATGGAAACTTTGCTGCGTCGGCTAGGAATGTTCGCTTGGTTGATGGGGG
ACGTGTGCTGGAGGCGGAGTTGGCGGATGGGAACGATGGCTGGAATCGGA
CCTGGATTCGTCTGGATGAGAGGATTACGAACCAGAACGGCCAGCTGATG
TTCCTGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0019867 | outer membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.2 |
| DBxref | InterPro:IPR008816 |
| DBxref | InterPro:IPR036673 |
| DBxref | InterPro:IPR011058 |
| DBxref | PFAM:PF05433 |
| DBxref | PFAM:PF08881 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:560100..561161 + |
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