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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:907133..908044- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007687-T1 ID=CBS51388_007687-T1|Name=CBS51388_007687-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=912bp|location=Sequence derived from alignment at An12:907133..908044- (Aspergillus niger CBS 513.88)
ATGTCCTCCAAGTCGCGATTGACCTACACTGCCCGTGCCAGCAAGCATCC
CAATGCTCTGGCGAAGAGGCTGTTCGAGATTGCCGAGGCCAAGAAGACCA
ATGTGACTGTCTCGGCTGACGTTACCACCACTAAGGAGCTACTAGATCTT
GCTGACCGTAGGCCGACCCGCTACTCTGCCTGATTATGCTGCATGCAAAC
TTATTAACGGTGATACCGGACTGCAGGTCTCGGTCCCTACATTGCCGTGA
TCAAAACCCACATCGATATCCTCTCTGATTTCAGCAACGAGACCATTGAG
GGACTTAAGGCTCTCGCGCAGAAGCACAACTTTCTCATCTTCGAGGACCG
CAAGTTCATTGACATCGGCAACACGGTCCAGAAGCAATACCACGGCGGTA
CCCTCCGTATCTCGGAATGGGCCCACATCATCAACTGCAGCATTCTCCCT
GGTGAGGGTATCGTCGAGGCTCTCGCTCAGACGGCGTCTGCACCGGACTT
CGCCTACGGCCCCGAACGCGGTCTGTTGATCTTGGCAGAGATGACCTCTA
AGGGCTCCTTGGCTACCGGCCAGTACACTACTTCCTCGGTCGATTATGCC
CGGAAATACAAGAACTTCGTTATGGGATTCGTGTCGACGCGCGCGTTGGG
TGAGGTGCAGTCGGAAGTCAGCTCTCCTTCGGATGAGGAGGACTTTGTGG
TCTTCACGACTGGTGTGAACATTTCTTCCAAGGGAGATAAGCTTGGTCAG
CAGTACCAGACGCCCGGATCGGCTATCGGCCGGGGTGCTGACTTCATTAT
CGCGGGTCGCGGTATCTACGCCGCGCCGGATCCGGTGCAGGCTGCGCAAC
AGTATCAGAAGGAGGGGTGGGAAGCCTACCTGGCCCGTGTCGGCGGAAAA
CTAATACTATAA back to topCoding sequence (CDS) from alignment at An12:907133..908044- >CBS51388_007687-T1 ID=CBS51388_007687-T1|Name=CBS51388_007687-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1686bp|location=Sequence derived from alignment at An12:907133..908044- (Aspergillus niger CBS 513.88)
GTCTCGGTCCCTACATTGCCGTGATCAAAACCCACATCGATATCCTCTCT
GATTTCAGCAACGAGACCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCA
CAACTTTCTCATCTTCGAGGACCGCAAGTTCATTGACATCGGCAACACGG
TCCAGAAGCAATACCACGGCGGTACCCTCCGTATCTCGGAATGGGCCCAC
ATCATCAACTGCAGCATTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGC
TCAGACGGCGTCTGCACCGGACTTCGCCTACGGCCCCGAACGCGGTCTGT
TGATCTTGGCAGAGATGACCTCTAAGGGCTCCTTGGCTACCGGCCAGTAC
ACTACTTCCTCGGTCGATTATGCCCGGAAATACAAGAACTTCGTTATGGG
ATTCGTGTCGACGCGCGCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTC
CTTCGGATGAGGAGGACTTTGTGGTCTTCACGACTGGTGTGAACATTTCT
TCCAAGGGAGATAAGCTTGGTCAGCAGTACCAGACGCCCGGATCGGCTAT
CGGCCGGGGTGCTGACTTCATTATCGCGGGTCGCGGTATCTACGCCGCGC
CGGATCCGGTGCAGGCTGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCC
TACCTGGCCCGTGTCGGCGGAAAACTAATACTATAAATGTCCTCCAAGTC
GCGATTGACCTACACTGCCCGTGCCAGCAAGCATCCCAATGCTCTGGCGA
AGAGGCTGTTCGAGATTGCCGAGGCCAAGAAGACCAATGTGACTGTCTCG
GCTGACGTTACCACCACTAAGGAGCTACTAGATCTTGCTGACCGTCTCGG
TCCCTACATTGCCGTGATCAAAACCCACATCGATATCCTCTCTGATTTCA
GCAACGAGACCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCACAACTTT
CTCATCTTCGAGGACCGCAAGTTCATTGACATCGGCAACACGGTCCAGAA
GCAATACCACGGCGGTACCCTCCGTATCTCGGAATGGGCCCACATCATCA
ACTGCAGCATTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGCTCAGACG
GCGTCTGCACCGGACTTCGCCTACGGCCCCGAACGCGGTCTGTTGATCTT
GGCAGAGATGACCTCTAAGGGCTCCTTGGCTACCGGCCAGTACACTACTT
CCTCGGTCGATTATGCCCGGAAATACAAGAACTTCGTTATGGGATTCGTG
TCGACGCGCGCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTCCTTCGGA
TGAGGAGGACTTTGTGGTCTTCACGACTGGTGTGAACATTTCTTCCAAGG
GAGATAAGCTTGGTCAGCAGTACCAGACGCCCGGATCGGCTATCGGCCGG
GGTGCTGACTTCATTATCGCGGGTCGCGGTATCTACGCCGCGCCGGATCC
GGTGCAGGCTGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCCTACCTGG
CCCGTGTCGGCGGAAAACTAATACTATAAATGTCCTCCAAGTCGCGATTG
ACCTACACTGCCCGTGCCAGCAAGCATCCCAATGCTCTGGCGAAGAGGCT
GTTCGAGATTGCCGAGGCCAAGAAGACCAATGTGACTGTCTCGGCTGACG
TTACCACCACTAAGGAGCTACTAGATCTTGCTGACC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0044205 | 'de novo' UMP biosynthetic process |
| GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004590 | orotidine-5'-phosphate decarboxylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263Q7N |
| DBxref | InterPro:IPR011060 |
| DBxref | InterPro:IPR018089 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR014732 |
| DBxref | InterPro:IPR001754 |
| DBxref | PFAM:PF00215 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:907133..908044 - |
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