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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:917236..918138- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007692-T1 ID=CBS51388_007692-T1|Name=CBS51388_007692-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=903bp|location=Sequence derived from alignment at An12:917236..918138- (Aspergillus niger CBS 513.88)
ATGTCCCACTCCCCTCCCTCCCCCTCTCCCTCCCCATCCCCATCACCACC
ATTTCGCCCATACCGACCACCACCACCCACCAACAACCACAACCACACCA
CCACCTTCGACACCTCCATCCTCCCCAACGGCTCCAAATCCCTCTCCGCC
ATCTCCATCCGCGCCTACCTCCTCGGCACCGTCCTCGGCGTCTCCACAAC
CCTAACCATCCTCTCCCTCCTCTACGACCCCCTATACACTCCCCTCTGGC
GCATCCCCTTCTTCCTCTCTTCTCTCTCCCTCTTCCACTTCCTCGAATAC
TACACCACCGCCGCATACAACACCCACTTCGCCACCGTCTCCGCCTACCT
CCTCACCTCCAACGGCTGGGCCTATAACATCGCCCACGGCTCCGCGATCC
TCGAATGTCTCCTCATGCATACATATTTCACCGCCCGCCCGGTGCCGTTA
TACCTCCCCTCCTCGCTTACGACCTACCAAGTAGCCGTTGGCTTACTGCT
GATGGTCGTGGGCCAGACGATCCGCAGCGTGGCCATGGCGCAGGCGGGCA
GTAACTTTAATCATACGGTGCAGGTTACCCGACGGGAAGGGCATGTGCTT
GTCACCGGGGGTGTGTATAGTGTGTTGAGACATCCGAGTTACTTTGGGTT
CTTTTGGTGGGGGTTGGGGACCCAGTTGGTTCTTGGGAATGGGGTGTGTT
TTGTAGCGTATGCGGTTGTCTTGTGGAGGTTTTTTAGTGGGAGGATTTGG
AGTAAGTCCTACTTCTTTTTCTTGCTTTTGGTTTTGGGGGTGTGTGCTAA
TCGATTTGTGATAGGGGAGGAGAAGTTCCTGGTTGCCTTCTTTGGGGAGG
AGTATGAGCGGTATAGGAAGAGGAGTTGGGTGGGGATTCCGGGGATTCAT
TGA back to topCoding sequence (CDS) from alignment at An12:917236..918138- >CBS51388_007692-T1 ID=CBS51388_007692-T1|Name=CBS51388_007692-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1680bp|location=Sequence derived from alignment at An12:917236..918138- (Aspergillus niger CBS 513.88)
GGGAGGAGAAGTTCCTGGTTGCCTTCTTTGGGGAGGAGTATGAGCGGTAT
AGGAAGAGGAGTTGGGTGGGGATTCCGGGGATTCATTGAATGTCCCACTC
CCCTCCCTCCCCCTCTCCCTCCCCATCCCCATCACCACCATTTCGCCCAT
ACCGACCACCACCACCCACCAACAACCACAACCACACCACCACCTTCGAC
ACCTCCATCCTCCCCAACGGCTCCAAATCCCTCTCCGCCATCTCCATCCG
CGCCTACCTCCTCGGCACCGTCCTCGGCGTCTCCACAACCCTAACCATCC
TCTCCCTCCTCTACGACCCCCTATACACTCCCCTCTGGCGCATCCCCTTC
TTCCTCTCTTCTCTCTCCCTCTTCCACTTCCTCGAATACTACACCACCGC
CGCATACAACACCCACTTCGCCACCGTCTCCGCCTACCTCCTCACCTCCA
ACGGCTGGGCCTATAACATCGCCCACGGCTCCGCGATCCTCGAATGTCTC
CTCATGCATACATATTTCACCGCCCGCCCGGTGCCGTTATACCTCCCCTC
CTCGCTTACGACCTACCAAGTAGCCGTTGGCTTACTGCTGATGGTCGTGG
GCCAGACGATCCGCAGCGTGGCCATGGCGCAGGCGGGCAGTAACTTTAAT
CATACGGTGCAGGTTACCCGACGGGAAGGGCATGTGCTTGTCACCGGGGG
TGTGTATAGTGTGTTGAGACATCCGAGTTACTTTGGGTTCTTTTGGTGGG
GGTTGGGGACCCAGTTGGTTCTTGGGAATGGGGTGTGTTTTGTAGCGTAT
GCGGTTGTCTTGTGGAGGTTTTTTAGTGGGAGGATTTGGAGGGAGGAGAA
GTTCCTGGTTGCCTTCTTTGGGGAGGAGTATGAGCGGTATAGGAAGAGGA
GTTGGGTGGGGATTCCGGGGATTCATTGAATGTCCCACTCCCCTCCCTCC
CCCTCTCCCTCCCCATCCCCATCACCACCATTTCGCCCATACCGACCACC
ACCACCCACCAACAACCACAACCACACCACCACCTTCGACACCTCCATCC
TCCCCAACGGCTCCAAATCCCTCTCCGCCATCTCCATCCGCGCCTACCTC
CTCGGCACCGTCCTCGGCGTCTCCACAACCCTAACCATCCTCTCCCTCCT
CTACGACCCCCTATACACTCCCCTCTGGCGCATCCCCTTCTTCCTCTCTT
CTCTCTCCCTCTTCCACTTCCTCGAATACTACACCACCGCCGCATACAAC
ACCCACTTCGCCACCGTCTCCGCCTACCTCCTCACCTCCAACGGCTGGGC
CTATAACATCGCCCACGGCTCCGCGATCCTCGAATGTCTCCTCATGCATA
CATATTTCACCGCCCGCCCGGTGCCGTTATACCTCCCCTCCTCGCTTACG
ACCTACCAAGTAGCCGTTGGCTTACTGCTGATGGTCGTGGGCCAGACGAT
CCGCAGCGTGGCCATGGCGCAGGCGGGCAGTAACTTTAATCATACGGTGC
AGGTTACCCGACGGGAAGGGCATGTGCTTGTCACCGGGGGTGTGTATAGT
GTGTTGAGACATCCGAGTTACTTTGGGTTCTTTTGGTGGGGGTTGGGGAC
CCAGTTGGTTCTTGGGAATGGGGTGTGTTTTGTAGCGTATGCGGTTGTCT
TGTGGAGGTTTTTTAGTGGGAGGATTTGGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005783 | endoplasmic reticulum |
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004671 | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006481 | C-terminal protein methylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025770 |
| DBxref | InterPro:IPR007269 |
| DBxref | PFAM:PF04191 |
| DBxref | PFAM:PF04140 |
| DBxref | PFAM:PF06966 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:917236..918138 - |
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