|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1109563..1111306- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007763-T1 ID=CBS51388_007763-T1|Name=CBS51388_007763-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1744bp|location=Sequence derived from alignment at An12:1109563..1111306- (Aspergillus niger CBS 513.88)
ATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATGCCTACGGCTAGC
CAGTGGTGGGAAGCTGGCCGGATACCCTGAGGATCAGCCTGGTTTCCAAC
TACCAGCTGGATCCCTCGAGCCCTCCACCTCCTCCTCATCCACTTCCTCC
TCCAATGGAGAGCTCATCGGGGATCCGGAAAAGGGCAATAAAGAACCCAA
TCCATCAGTAATCGGCTGGTATGGCGAGAATGATCCAGAAAACCCACACA
ACTGGTCCTCCGGAAAAAAGCTCTGGGTTGCCATGCTACTTTTTGTCTAC
ACCTTCTCCGTTTATATCGGCTCCTCGCTATATACTGCCAGTGAGCCGGA
CGTCATGCGGATCTACGGTGTTGGTGACGAAGTGGCCGAGCTGGGATTAA
CCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTCTTCTCGCCTCTG
TCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACACTGTCACTTATTT
CCTCTTTGTCATTCTCTGCACTCCTATGGCTCTGGTTAATAATATTGCGG
GTATTCTTATTCTCCGCTTCCTTCTTGGCTTCTTCGGCTCGCCCTGCCTG
GCTACGGCCGGCGCAAGCTACGGCGATTTCTACGGCGCAAAGGAAATGCC
CTATGTGATAGCTCTATGGGGCGGAGGTGCAACTCTTGGCCCAGTACGTT
CATTTCCTACAAATACTCACACCTACTATACTAACAATATATCGAGGCCC
TCGGCCCACTGGTTGCCGGATTCGCCGTCGAGAAAATGGGATGGCGTTGG
AGCTCGTGGGAGCTCCTTTGGCTATCAGCCCCCACAATGGTTATCATGTT
CCTCAGTATGCCTGAGACATCATCAGACAACATCCTGCTCCGCCGCGCTC
GACGCCTACGCACTCAAACAGGTTGCATAGACATCAAGTCCGAGTCCGAG
ATTCGTCAGTCAAAGATGAGTCCAAGAGCAATTACATTCAACGCTCTCAT
CAAACCATGGGAGATAAATGCTCTTGACCCTGCTGTTCTTTTCTCAACCT
TCTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTC
CCCCTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCGGGGTCT
CGCATTCCTTGCTGTTCTGTGCGGCCTCTGTGTTGCGGTCGGTCTTCTAT
GCGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCT
GTGCCTCCTGAAGCTCGTATTTGGCCGGGGTTGTTCGCGACATGGCTTAT
TCCAATAGGATTGTATATCTTTGGTACGTTCTTCTTCCTGTCCTTTAACT
TCTCCTCGATTCTCTTTTGTCTGTGAAGGTTGTAATTTATACTAATCAAT
ATCCTCCAGCATGGACCTCCTCCCCCTCCATCCATTGGATCGTCAGCCTG
GTCGGCATCGCCATCAGCATGTGCGGCGTCTTTATCATCACCCAGTGCAT
GTTCATCTACCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTGTTCG
CCGCCAACGGCTTCGCGCGCAGTCTACTTGCTGGTGCTTCTATTCTCTTC
TCTCGCCTAATGTTCCAGGGGATTAAGGTCTCTGGTGGAGTGACTCTGCT
TGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTACTTTT
TCGGGGCGCGGTTGCGGGAGAGGAGTCGGTTTACGGGGCTGTGA back to topCoding sequence (CDS) from alignment at An12:1109563..1111306- >CBS51388_007763-T1 ID=CBS51388_007763-T1|Name=CBS51388_007763-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4815bp|location=Sequence derived from alignment at An12:1109563..1111306- (Aspergillus niger CBS 513.88)
CATGGACCTCCTCCCCCTCCATCCATTGGATCGTCAGCCTGGTCGGCATC
GCCATCAGCATGTGCGGCGTCTTTATCATCACCCAGTGCATGTTCATCTA
CCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTGTTCGCCGCCAACG
GCTTCGCGCGCAGTCTACTTGCTGGTGCTTCTATTCTCTTCTCTCGCCTA
ATGTTCCAGGGGATTAAGGTCTCTGGTGGAGTGACTCTGCTTGCGAGTCT
TAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTACTTTTTCGGGGCGC
GGTTGCGGGAGAGGAGTCGGTTTACGGGGCTGTGAGCCCTCGGCCCACTG
GTTGCCGGATTCGCCGTCGAGAAAATGGGATGGCGTTGGAGCTCGTGGGA
GCTCCTTTGGCTATCAGCCCCCACAATGGTTATCATGTTCCTCAGTATGC
CTGAGACATCATCAGACAACATCCTGCTCCGCCGCGCTCGACGCCTACGC
ACTCAAACAGGTTGCATAGACATCAAGTCCGAGTCCGAGATTCGTCAGTC
AAAGATGAGTCCAAGAGCAATTACATTCAACGCTCTCATCAAACCATGGG
AGATAAATGCTCTTGACCCTGCTGTTCTTTTCTCAACCTTCTACACTGCG
CTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTCCCCCTCGTGTA
TACAGACATGTACGGCTTCACTCTGGGCGAGCGGGGTCTCGCATTCCTTG
CTGTTCTGTGCGGCCTCTGTGTTGCGGTCGGTCTTCTATGCGCATATTTC
TACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCTGTGCCTCCTGA
AGCTCGTATTTGGCCGGGGTTGTTCGCGACATGGCTTATTCCAATAGGAT
TGTATATCTTTGATGTGGGACATCATTCGTGACTCTACCTTTGGCCAATG
CCTACGGCTAGCCAGTGGTGGGAAGCTGGCCGGATACCCTGAGGATCAGC
CTGGTTTCCAACTACCAGCTGGATCCCTCGAGCCCTCCACCTCCTCCTCA
TCCACTTCCTCCTCCAATGGAGAGCTCATCGGGGATCCGGAAAAGGGCAA
TAAAGAACCCAATCCATCAGTAATCGGCTGGTATGGCGAGAATGATCCAG
AAAACCCACACAACTGGTCCTCCGGAAAAAAGCTCTGGGTTGCCATGCTA
CTTTTTGTCTACACCTTCTCCGTTTATATCGGCTCCTCGCTATATACTGC
CAGTGAGCCGGACGTCATGCGGATCTACGGTGTTGGTGACGAAGTGGCCG
AGCTGGGATTAACCATGTATGTCCTTGCTTATGGTCTAGGCCCCATGCTC
TTCTCGCCTCTGTCAGAGATTCCAGCCGTCGGTCGCACTCTTCCGTACAC
TGTCACTTATTTCCTCTTTGTCATTCTCTGCACTCCTATGGCTCTGGTTA
ATAATATTGCGGGTATTCTTATTCTCCGCTTCCTTCTTGGCTTCTTCGGC
TCGCCCTGCCTGGCTACGGCCGGCGCAAGCTACGGCGATTTCTACGGCGC
AAAGGAAATGCCCTATGTGATAGCTCTATGGGGCGGAGGTGCAACTCTTG
GCCCACATGGACCTCCTCCCCCTCCATCCATTGGATCGTCAGCCTGGTCG
GCATCGCCATCAGCATGTGCGGCGTCTTTATCATCACCCAGTGCATGTTC
ATCTACCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTGTTCGCCGC
CAACGGCTTCGCGCGCAGTCTACTTGCTGGTGCTTCTATTCTCTTCTCTC
GCCTAATGTTCCAGGGGATTAAGGTCTCTGGTGGAGTGACTCTGCTTGCG
AGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTACTTTTTCGG
GGCGCGGTTGCGGGAGAGGAGTCGGTTTACGGGGCTGTGAGCCCTCGGCC
CACTGGTTGCCGGATTCGCCGTCGAGAAAATGGGATGGCGTTGGAGCTCG
TGGGAGCTCCTTTGGCTATCAGCCCCCACAATGGTTATCATGTTCCTCAG
TATGCCTGAGACATCATCAGACAACATCCTGCTCCGCCGCGCTCGACGCC
TACGCACTCAAACAGGTTGCATAGACATCAAGTCCGAGTCCGAGATTCGT
CAGTCAAAGATGAGTCCAAGAGCAATTACATTCAACGCTCTCATCAAACC
ATGGGAGATAAATGCTCTTGACCCTGCTGTTCTTTTCTCAACCTTCTACA
CTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTCCCCCTC
GTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCGGGGTCTCGCATT
CCTTGCTGTTCTGTGCGGCCTCTGTGTTGCGGTCGGTCTTCTATGCGCAT
ATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCTGTGCCT
CCTGAAGCTCGTATTTGGCCGGGGTTGTTCGCGACATGGCTTATTCCAAT
AGGATTGTATATCTTTGATGTGGGACATCATTCGTGACTCTACCTTTGGC
CAATGCCTACGGCTAGCCAGTGGTGGGAAGCTGGCCGGATACCCTGAGGA
TCAGCCTGGTTTCCAACTACCAGCTGGATCCCTCGAGCCCTCCACCTCCT
CCTCATCCACTTCCTCCTCCAATGGAGAGCTCATCGGGGATCCGGAAAAG
GGCAATAAAGAACCCAATCCATCAGTAATCGGCTGGTATGGCGAGAATGA
TCCAGAAAACCCACACAACTGGTCCTCCGGAAAAAAGCTCTGGGTTGCCA
TGCTACTTTTTGTCTACACCTTCTCCGTTTATATCGGCTCCTCGCTATAT
ACTGCCAGTGAGCCGGACGTCATGCGGATCTACGGTGTTGGTGACGAAGT
GGCCGAGCTGGGATTAACCATGTATGTCCTTGCTTATGGTCTAGGCCCCA
TGCTCTTCTCGCCTCTGTCAGAGATTCCAGCCGTCGGTCGCACTCTTCCG
TACACTGTCACTTATTTCCTCTTTGTCATTCTCTGCACTCCTATGGCTCT
GGTTAATAATATTGCGGGTATTCTTATTCTCCGCTTCCTTCTTGGCTTCT
TCGGCTCGCCCTGCCTGGCTACGGCCGGCGCAAGCTACGGCGATTTCTAC
GGCGCAAAGGAAATGCCCTATGTGATAGCTCTATGGGGCGGAGGTGCAAC
TCTTGGCCCACATGGACCTCCTCCCCCTCCATCCATTGGATCGTCAGCCT
GGTCGGCATCGCCATCAGCATGTGCGGCGTCTTTATCATCACCCAGTGCA
TGTTCATCTACCTCCCCTTCACGTATCCTCGATACGCGGGCTCGCTGTTC
GCCGCCAACGGCTTCGCGCGCAGTCTACTTGCTGGTGCTTCTATTCTCTT
CTCTCGCCTAATGTTCCAGGGGATTAAGGTCTCTGGTGGAGTGACTCTGC
TTGCGAGTCTTAGTGTTTTTTGTATTGTGGGTATGTTCCTGCTTTACTTT
TTCGGGGCGCGGTTGCGGGAGAGGAGTCGGTTTACGGGGCTGTGAGCCCT
CGGCCCACTGGTTGCCGGATTCGCCGTCGAGAAAATGGGATGGCGTTGGA
GCTCGTGGGAGCTCCTTTGGCTATCAGCCCCCACAATGGTTATCATGTTC
CTCAGTATGCCTGAGACATCATCAGACAACATCCTGCTCCGCCGCGCTCG
ACGCCTACGCACTCAAACAGGTTGCATAGACATCAAGTCCGAGTCCGAGA
TTCGTCAGTCAAAGATGAGTCCAAGAGCAATTACATTCAACGCTCTCATC
AAACCATGGGAGATAAATGCTCTTGACCCTGCTGTTCTTTTCTCAACCTT
CTACACTGCGCTTACATATGCAATCTATTATTCGTTCTTCGAGTCCTTCC
CCCTCGTGTATACAGACATGTACGGCTTCACTCTGGGCGAGCGGGGTCTC
GCATTCCTTGCTGTTCTGTGCGGCCTCTGTGTTGCGGTCGGTCTTCTATG
CGCATATTTCTACTTTATTGCCCCAAAGCAGCTGGGGAAGCTTGATCCTG
TGCCTCCTGAAGCTCGTATTTGGCCGGGGTTGTTCGCGACATGGCTTATT
CCAATAGGATTGTATATCTTTGATGTGGGACATCATTCGTGACTCTACCT
TTGGCCAATGCCTACGGCTAGCCAGTGGTGGGAAGCTGGCCGGATACCCT
GAGGATCAGCCTGGTTTCCAACTACCAGCTGGATCCCTCGAGCCCTCCAC
CTCCTCCTCATCCACTTCCTCCTCCAATGGAGAGCTCATCGGGGATCCGG
AAAAGGGCAATAAAGAACCCAATCCATCAGTAATCGGCTGGTATGGCGAG
AATGATCCAGAAAACCCACACAACTGGTCCTCCGGAAAAAAGCTCTGGGT
TGCCATGCTACTTTTTGTCTACACCTTCTCCGTTTATATCGGCTCCTCGC
TATATACTGCCAGTGAGCCGGACGTCATGCGGATCTACGGTGTTGGTGAC
GAAGTGGCCGAGCTGGGATTAACCATGTATGTCCTTGCTTATGGTCTAGG
CCCCATGCTCTTCTCGCCTCTGTCAGAGATTCCAGCCGTCGGTCGCACTC
TTCCGTACACTGTCACTTATTTCCTCTTTGTCATTCTCTGCACTCCTATG
GCTCTGGTTAATAATATTGCGGGTATTCTTATTCTCCGCTTCCTTCTTGG
CTTCTTCGGCTCGCCCTGCCTGGCTACGGCCGGCGCAAGCTACGGCGATT
TCTACGGCGCAAAGGAAATGCCCTATGTGATAGCTCTATGGGGCGGAGGT
GCAACTCTTGGCCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1109563..1111306 - |
|
