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CBS51388_007865-T1, CBS51388_007865-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007865-T1
Unique NameCBS51388_007865-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:1410698..1412342+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007865-T1 ID=CBS51388_007865-T1|Name=CBS51388_007865-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1645bp|location=Sequence derived from alignment at An12:1410698..1412342+ (Aspergillus niger CBS 513.88)
ATGTCACCAGCGATAGGCCAGTCGGCGAAATATGTCGACACGTATGCTTC
TTTTGGGCTTCTCGATTACCAGCTTTTCCTTCTCAACGTATTCGCCGGTC
ACTACAGAAATTCTGGCGACAAGGCGTTCGTAACCAAGCATTGGGCGAAG
ATCAAGAAGGGCGTGGAAGCTATCCTGCCCTTGATAGATGATCAATCTGG
ACTGGCGGTCGCTACCGACATCGGGGCATTCTTCTCTGGATCCGACAATG
GTACTGCAGTATCGGCACTTCTTGCCCACACACTCGACCAGATGGCCGAT
GTTGCATCCGCAATGAATGAGACAGATGTCGCGACAACTTGGACTCGCTC
GGCGACTTCAGTCAAAGCTGCGATCCGCCAACAGCTCTGGAACCACCGCC
TTGGATACTACGCTACCGACTTGAGTGACCCGACCGAGCAGTCTATCACC
GGTAGCGCCTGGGCTATTCTGGCGGGAGTCGCCAACGCCACGCAAGCAGA
ATCCTCGCTCGCGGCGTTATCATCACTCCGGCTTGGTATCGGCTACAAAA
CGACGAGCTCCGTTGCCAACGCATCATCGACTAATCTTGCGCCTTTCCTC
ACTGGCTTCCTCCTAGAAGCGATTATGCAGGAAAGTCGCAATAGCCCCAG
TTCAAGCAAAGCGAGGACGACAGCTATTGGCGTGCTCCTCGACCAGCTCT
GGGCTGCGATGGTGACCCAAAATGAATACTATACTGGCACGACCTGGGAA
TATCTTTACCCTGATGGCCGACCCGGGCTTGACTTCTATACGTCGCATGC
GCACCCCTGGGCAGCTGCGCCGACGTATGTTTTCTCGGAATATGTACTTG
GTGTTCAGGCGACTTCGGCTGGGTTTTCTGAGTGGGAGTTTCGCCCAGCG
ATGCTGGATGTAAATTTGTCCTGGGCGCGGGGAAGAGTGCCTACTCCTCA
GGGGCCGATCCAAGCTAGTTGGCAGTTGAATGAAACGAGCGTGCAGTTGA
GCGTGTGTGGGCCTAGTGGTACAGAGGGGGTTGTCAGGGTGCCATTTGCT
ATTAAATCCTATTCCGTGGATGGGGAACAACAAACAAATGACAAGGACGG
CTTGGAAGTTCAAGTGTCCGGAGGATCATGTACTGATATCCATGCTGTGA
GAGGGTGAGCCTATCTCGAGACAATTTCGAGATTTGTACATACCGTATTG
TCGCTCATAATGTTAATGACTGCACATATAAGAAACATTCAATATGTAAC
GAACTGTTGTCACAAGTCATGATAAAATGCAGAAAATCGCTCGCTCTCCC
GACTCTGAACAGATGCCACGAGTGGGGTTCGTCCCCGCAAAACCTAAATT
AATAGCTAATTTCTCGCCTTTACCCCAGCCCAGCAATGCAGCCAATCGCA
AGCCTGATTCGATGCGGTCTGAGGGCCACGCGGCTGGCCATGGCATATCC
GCCTGCCTTGTGGCGTTCCATAACCAACAGTCGTCGAGAAACCCTGGTCT
GGCTTCGGCTTGGGCCACTCCCTATGGATTATTCGCCTTTTTCCAACAGC
TCTCGAGCCTTCTGATCAAGCACATGGCTTGTTTCTCGGCTTTGATTATC
CCGAAGCCCCAGAAGCTTGGGCTTCTCCAGATGCAGGTTGAATAA
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Coding sequence (CDS) from alignment at An12:1410698..1412342+

>CBS51388_007865-T1 ID=CBS51388_007865-T1|Name=CBS51388_007865-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2952bp|location=Sequence derived from alignment at An12:1410698..1412342+ (Aspergillus niger CBS 513.88)
ATGTCACCAGCGATAGGCCAGTCGGCGAAATATGTCGACACGTATGCTTC
TTTTGGGCTTCTCGATTACCAGCTTTTCCTTCTCAACGTATTCGCCGGTC
ACTACAGAAATTCTGGCGACAAGGCGTTCGTAACCAAGCATTGGGCGAAG
ATCAAGAAGGGCGTGGAAGCTATCCTGCCCTTGATAGATGATCAATCTGG
ACTGGCGGTCGCTACCGACATCGGGGCATTCTTCTCTGGATCCGACAATG
GTACTGCAGTATCGGCACTTCTTGCCCACACACTCGACCAGATGGCCGAT
GTTGCATCCGCAATGAATGAGACAGATGTCGCGACAACTTGGACTCGCTC
GGCGACTTCAGTCAAAGCTGCGATCCGCCAACAGCTCTGGAACCACCGCC
TTGGATACTACGCTACCGACTTGAGTGACCCGACCGAGCAGTCTATCACC
GGTAGCGCCTGGGCTATTCTGGCGGGAGTCGCCAACGCCACGCAAGCAGA
ATCCTCGCTCGCGGCGTTATCATCACTCCGGCTTGGTATCGGCTACAAAA
CGACGAGCTCCGTTGCCAACGCATCATCGACTAATCTTGCGCCTTTCCTC
ACTGGCTTCCTCCTAGAAGCGATTATGCAGGAAAGTCGCAATAGCCCCAG
TTCAAGCAAAGCGAGGACGACAGCTATTGGCGTGCTCCTCGACCAGCTCT
GGGCTGCGATGGTGACCCAAAATGAATACTATACTGGCACGACCTGGGAA
TATCTTTACCCTGATGGCCGACCCGGGCTTGACTTCTATACGTCGCATGC
GCACCCCTGGGCAGCTGCGCCGACGTATGTTTTCTCGGAATATGTACTTG
GTGTTCAGGCGACTTCGGCTGGGTTTTCTGAGTGGGAGTTTCGCCCAGCG
ATGCTGGATGTAAATTTGTCCTGGGCGCGGGGAAGAGTGCCTACTCCTCA
GGGGCCGATCCAAGCTAGTTGGCAGTTGAATGAAACGAGCGTGCAGTTGA
GCGTGTGTGGGCCTAGTGGTACAGAGGGGGTTGTCAGGGTGCCATTTGCT
ATTAAATCCTATTCCGTGGATGGGGAACAACAAACAAATGACAAGGACGG
CTTGGAAGTTCAAAAAATCGCTCGCTCTCCCGACTCTGAACAGATGCCAC
GAGTGGGGTTCGTCCCCGCAAAACCTAAATTAATAGCTAATTTCTCGCCT
TTACCCCAGCCCAGCAATGCAGCCAATCGCAAGCCTGATTCGATGCGGTC
TGAGGGCCACGCGGCTGGCCATGGCATATCCGCCTGCCTTGTGGCGTTCC
ATAACCAACAGTCGTCGAGAAACCCTGGTCTGGCTTCGGCTTGGGCCACT
CCCTATGGATTATTCGCCTTTTTCCAACAGCTCTCGAGCCTTCTGATCAA
GCACATGGCTTGTTTCTCGGCTTTGATTATCCCGAAGCCCCAGAAGCTTG
GGCTTCTCCAGATGCAGGTTGAATAAATGTCACCAGCGATAGGCCAGTCG
GCGAAATATGTCGACACGTATGCTTCTTTTGGGCTTCTCGATTACCAGCT
TTTCCTTCTCAACGTATTCGCCGGTCACTACAGAAATTCTGGCGACAAGG
CGTTCGTAACCAAGCATTGGGCGAAGATCAAGAAGGGCGTGGAAGCTATC
CTGCCCTTGATAGATGATCAATCTGGACTGGCGGTCGCTACCGACATCGG
GGCATTCTTCTCTGGATCCGACAATGGTACTGCAGTATCGGCACTTCTTG
CCCACACACTCGACCAGATGGCCGATGTTGCATCCGCAATGAATGAGACA
GATGTCGCGACAACTTGGACTCGCTCGGCGACTTCAGTCAAAGCTGCGAT
CCGCCAACAGCTCTGGAACCACCGCCTTGGATACTACGCTACCGACTTGA
GTGACCCGACCGAGCAGTCTATCACCGGTAGCGCCTGGGCTATTCTGGCG
GGAGTCGCCAACGCCACGCAAGCAGAATCCTCGCTCGCGGCGTTATCATC
ACTCCGGCTTGGTATCGGCTACAAAACGACGAGCTCCGTTGCCAACGCAT
CATCGACTAATCTTGCGCCTTTCCTCACTGGCTTCCTCCTAGAAGCGATT
ATGCAGGAAAGTCGCAATAGCCCCAGTTCAAGCAAAGCGAGGACGACAGC
TATTGGCGTGCTCCTCGACCAGCTCTGGGCTGCGATGGTGACCCAAAATG
AATACTATACTGGCACGACCTGGGAATATCTTTACCCTGATGGCCGACCC
GGGCTTGACTTCTATACGTCGCATGCGCACCCCTGGGCAGCTGCGCCGAC
GTATGTTTTCTCGGAATATGTACTTGGTGTTCAGGCGACTTCGGCTGGGT
TTTCTGAGTGGGAGTTTCGCCCAGCGATGCTGGATGTAAATTTGTCCTGG
GCGCGGGGAAGAGTGCCTACTCCTCAGGGGCCGATCCAAGCTAGTTGGCA
GTTGAATGAAACGAGCGTGCAGTTGAGCGTGTGTGGGCCTAGTGGTACAG
AGGGGGTTGTCAGGGTGCCATTTGCTATTAAATCCTATTCCGTGGATGGG
GAACAACAAACAAATGACAAGGACGGCTTGGAAGTTCAAAAAATCGCTCG
CTCTCCCGACTCTGAACAGATGCCACGAGTGGGGTTCGTCCCCGCAAAAC
CTAAATTAATAGCTAATTTCTCGCCTTTACCCCAGCCCAGCAATGCAGCC
AATCGCAAGCCTGATTCGATGCGGTCTGAGGGCCACGCGGCTGGCCATGG
CATATCCGCCTGCCTTGTGGCGTTCCATAACCAACAGTCGTCGAGAAACC
CTGGTCTGGCTTCGGCTTGGGCCACTCCCTATGGATTATTCGCCTTTTTC
CAACAGCTCTCGAGCCTTCTGATCAAGCACATGGCTTGTTTCTCGGCTTT
GATTATCCCGAAGCCCCAGAAGCTTGGGCTTCTCCAGATGCAGGTTGAAT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007865CBS51388_007865Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007865-T1.exon1CBS51388_007865-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007865-T1.exon2CBS51388_007865-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007865-T1.cdsCBS51388_007865-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007865-T1CBS51388_007865-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteCAZy:GH78
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR012341
DBxrefInterPro:IPR035398
DBxrefInterPro:IPR035396
DBxrefPFAM:PF17390
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:1410698..1412342 +
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