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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:1869137..1870208+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008016-T1 ID=CBS51388_008016-T1|Name=CBS51388_008016-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1072bp|location=Sequence derived from alignment at An12:1869137..1870208+ (Aspergillus niger CBS 513.88)
ATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGCCCTGTGGA
GTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTTTGGACAGC
TGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGTCAGGGAAG
GTTGTCTTCGTCACTGGAGGTATGTCATCTCTATACCTTGGGCTGTCTAT
CTCAGTGCGCTAACTTCTCCGCTTGTTTCGTAGGAAATGCCGGTCTAGGA
AAAGAAACCATCCTCCAACTCGCCCATCACCGCCCATCTCGCATCTACCT
TGGTGCACGGAATGCGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGG
AGCAGGTTCCATCCGCCGATATCAGACACATATCCCTCGACCTGTCCTCA
TTCAAGTCGATCCGTGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCG
CCTGGACCTCTTGATCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCC
TGACAGAGGAAGGATTCGAGATACAATTCGGGACGAATCATATCGGGCAT
TTCCTACTTACCCAGCTACTACTACCCACACTGCAACGAACGGTTGATCT
TTCCAGGGATGTTCGTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCG
CGCCTCCCTTCGAAGTCATGACTTCTACGCCGGCTTTACTAGCGGATCAC
ACATTGGCCCGATACTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTC
GGAGCTGGCTCGTCGCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCG
GCTCCGTCGTGAGCGACCTATGGGATCATTCGATCAAGACGAGTGTCGTC
GCCAAATACAGTATCGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAG
CGGAGCACTCAACCAACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGA
CCAACGGAGCTTATTATGTTCCCATTGGGGTACACGCTACGGGCAACCGG
TACGCAAGGGACGCCGATATGGCACGGCGACTGTGGGAGTGGACTGAGCA
GCAGATTGCGGACAAATCGTAA back to topCoding sequence (CDS) from alignment at An12:1869137..1870208+ >CBS51388_008016-T1 ID=CBS51388_008016-T1|Name=CBS51388_008016-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2016bp|location=Sequence derived from alignment at An12:1869137..1870208+ (Aspergillus niger CBS 513.88)
ATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGCCCTGTGGA
GTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTTTGGACAGC
TGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGTCAGGGAAG
GTTGTCTTCGTCACTGGAGGAAATGCCGGTCTAGGAAAAGAAACCATCCT
CCAACTCGCCCATCACCGCCCATCTCGCATCTACCTTGGTGCACGGAATG
CGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGGAGCAGGTTCCATCC
GCCGATATCAGACACATATCCCTCGACCTGTCCTCATTCAAGTCGATCCG
TGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCGCCTGGACCTCTTGA
TCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCCTGACAGAGGAAGGA
TTCGAGATACAATTCGGGACGAATCATATCGGGCATTTCCTACTTACCCA
GCTACTACTACCCACACTGCAACGAACGGTTGATCTTTCCAGGGATGTTC
GTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCGCGCCTCCCTTCGAA
GTCATGACTTCTACGCCGGCTTTACTAGCGGATCACACATTGGCCCGATA
CTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTCGGAGCTGGCTCGTC
GCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCGGCTCCGTCGTGAGC
GACCTATGGGATCATTCGATCAAGACGAGTGTCGTCGCCAAATACAGTAT
CGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAGCGGAGCACTCAACC
AACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGACCAACGGAGCTTAT
TATGTTCCCATTGGGGTACACGCTACGGGCAACCGGTACGCAAGGGACGC
CGATATGGCACGGCGACTGTGGGAGTGGACTGAGCAGCAGATTGCGGACA
AATCGTAAATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGC
CCTGTGGAGTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTT
TGGACAGCTGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGT
CAGGGAAGGTTGTCTTCGTCACTGGAGGAAATGCCGGTCTAGGAAAAGAA
ACCATCCTCCAACTCGCCCATCACCGCCCATCTCGCATCTACCTTGGTGC
ACGGAATGCGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGGAGCAGG
TTCCATCCGCCGATATCAGACACATATCCCTCGACCTGTCCTCATTCAAG
TCGATCCGTGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCGCCTGGA
CCTCTTGATCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCCTGACAG
AGGAAGGATTCGAGATACAATTCGGGACGAATCATATCGGGCATTTCCTA
CTTACCCAGCTACTACTACCCACACTGCAACGAACGGTTGATCTTTCCAG
GGATGTTCGTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCGCGCCTC
CCTTCGAAGTCATGACTTCTACGCCGGCTTTACTAGCGGATCACACATTG
GCCCGATACTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTCGGAGCT
GGCTCGTCGCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCGGCTCCG
TCGTGAGCGACCTATGGGATCATTCGATCAAGACGAGTGTCGTCGCCAAA
TACAGTATCGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAGCGGAGC
ACTCAACCAACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGACCAACG
GAGCTTATTATGTTCCCATTGGGGTACACGCTACGGGCAACCGGTACGCA
AGGGACGCCGATATGGCACGGCGACTGTGGGAGTGGACTGAGCAGCAGAT
TGCGGACAAATCGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:1869137..1870208 + |
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