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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2014583..2016108+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008058-T1 ID=CBS51388_008058-T1|Name=CBS51388_008058-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1526bp|location=Sequence derived from alignment at An12:2014583..2016108+ (Aspergillus niger CBS 513.88)
ATGTCCGGCAACCCCAACGACCACAACGACCCGAACCGGCAGGGCCCGTA
CCGCAATCCCAACGATTTCAACGATCCTAATCGGCCGGGACAGTATCCGC
CTCCACCGCAATGGAATACTAGTCAACCTGAGCAGCCTGCTGACGGCCAA
GCTCCTCACTATCCGCCATCCTCTCAGTATCCTGTATGTTGCTTGCTCTT
TTGCTTCTATTCCGATTTTTTTTTTTTTCTTTCCTTTTTATACGTGCTTC
ATACCATTTATTCCTCAATTTATCTCTCATGTGCCTTCGAACTCCGCTGG
CTTGCGATGCGGCTCTTATTCGATTGTCAAACGGTGCATTGGCTAACCTT
GATGCTATCTTCACTCCATTAGTATCCTCCGGCTTCGTACCCTCCAACTT
CATATCCCCCGACTTCCTATCCACCACCAGAGCACCAATACCCGCCTGCA
CCTGGGCAGTATCCGCCTCCGCCGAACATGGCAGCTATCCCCCCTCCACA
GTCGCAGGACCCCTACCGCATGGCACCCCCTCCCGGCTCCTACCGCCCCC
CAGACATGTACAGCGCACCCCCTCCGCCTCAAGTAGTCTACCAAGCTGCT
GCTCCCCGTCAGCGGACTGCCATCGCGTGTCGTTATTGCCGGAGACGGAA
GGTACGTTCTCGCGTCGATTCTGTCAAATGGCTCCCTTTATGGGACGCTC
GTCTTATACTCGGTCGCAACTGACGCTTTTCTTTCCGGAACCAATAGATT
CGTTGCTCGGGATTTGAAAGCTCTCAGGATGGACGCTGCAGCAACTGCAT
CCGCTTCAACCAGGAGTGCATGTTCACGCCAGTCTCATCCCAGGCGCAAG
CCTTTGTACCTGCCCATGCCGCCTACCCGCACCTACGGAATGCCCAAAAC
CAAGGCCGCGGACCGCCTCCTGGAGGAGTGATGCTCTATGGTGCCCATGG
CCAGCCTCTCCCACCACAGCAGCAGCCGGAGAGTACACTTCCATCCGCGT
ACCCTCCTCAATACGCAAACGCTCCTCCTCTACCCAATGGAGCTCAGGAT
CATGTGAGTAGCACGAGCTTCTTATTGCGATCCAACTGGTTCTCTCTTTA
CTAATCTTCTTTGATCAGAGGCCTGTCGGTCGTCGAGGATCAAGCTCCGG
TTTTGAATATCCCGATCCCACAAATCTCGCCCCGGTAACACCCGCTTCAT
CTGCCTCTGGCTATCAGACGTATAGTGCGACGAGTCCATACTACCCGCCG
CCTCCTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTTACCCCTATGA
TGGTCGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCCCCTGTTCACC
CCAACCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCCGGGTGTTTCA
TCTCGCGGTGGACTGAACGTGCGAGATATGTTGAACCCTGGAGAAGGTCA
GAACCCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATGCTCAATGCAT
TGAACCGTCGGGGCCTAGGCCAATAG back to topCoding sequence (CDS) from alignment at An12:2014583..2016108+ >CBS51388_008058-T1 ID=CBS51388_008058-T1|Name=CBS51388_008058-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4704bp|location=Sequence derived from alignment at An12:2014583..2016108+ (Aspergillus niger CBS 513.88)
ATGTCCGGCAACCCCAACGACCACAACGACCCGAACCGGCAGGGCCCGTA
CCGCAATCCCAACGATTTCAACGATCCTAATCGGCCGGGACAGTATCCGC
CTCCACCGCAATGGAATACTAGTCAACCTGAGCAGCCTGCTGACGGCCAA
GCTCCTCACTATCCGCCATCCTCTCAGTATCCTTATCCTCCGGCTTCGTA
CCCTCCAACTTCATATCCCCCGACTTCCTATCCACCACCAGAGCACCAAT
ACCCGCCTGCACCTGGGCAGTATCCGCCTCCGCCGAACATGGCAGCTATC
CCCCCTCCACAGTCGCAGGACCCCTACCGCATGGCACCCCCTCCCGGCTC
CTACCGCCCCCCAGACATGTACAGCGCACCCCCTCCGCCTCAAGTAGTCT
ACCAAGCTGCTGCTCCCCGTCAGCGGACTGCCATCGCGTGTCGTTATTGC
CGGAGACGGAAGATTCGTTGCTCGGGATTTGAAAGCTCTCAGGATGGACG
CTGCAGCAACTGCATCCGCTTCAACCAGGAGTGCATGTTCACGCCAGTCT
CATCCCAGGCGCAAGCCTTTGTACCTGCCCATGCCGCCTACCCGCACCTA
CGGAATGCCCAAAACCAAGGCCGCGGACCGCCTCCTGGAGGAGTGATGCT
CTATGGTGCCCATGGCCAGCCTCTCCCACCACAGCAGCAGCCGGAGAGTA
CACTTCCATCCGCGTACCCTCCTCAATACGCAAACGCTCCTCCTCTACCC
AATGGAGCTCAGGATCATAGGCCTGTCGGTCGTCGAGGATCAAGCTCCGG
TTTTGAATATCCCGATCCCACAAATCTCGCCCCGGTAACACCCGCTTCAT
CTGCCTCTGGCTATCAGACGTATAGTGCGACGAGTCCATACTACCCGCCG
CCTCCTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTTACCCCTATGA
TGGTCGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCCCCTGTTCACC
CCAACCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCCGGGTGTTTCA
TCTCGCGGTGGACTGAACGTGCGAGATATGTTGAACCCTGGAGAAGGTCA
GAACCCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATGCTCAATGCAT
TGAACCGTCGGGGCCTAGGCCAATAGATGTCCGGCAACCCCAACGACCAC
AACGACCCGAACCGGCAGGGCCCGTACCGCAATCCCAACGATTTCAACGA
TCCTAATCGGCCGGGACAGTATCCGCCTCCACCGCAATGGAATACTAGTC
AACCTGAGCAGCCTGCTGACGGCCAAGCTCCTCACTATCCGCCATCCTCT
CAGTATCCTTATCCTCCGGCTTCGTACCCTCCAACTTCATATCCCCCGAC
TTCCTATCCACCACCAGAGCACCAATACCCGCCTGCACCTGGGCAGTATC
CGCCTCCGCCGAACATGGCAGCTATCCCCCCTCCACAGTCGCAGGACCCC
TACCGCATGGCACCCCCTCCCGGCTCCTACCGCCCCCCAGACATGTACAG
CGCACCCCCTCCGCCTCAAGTAGTCTACCAAGCTGCTGCTCCCCGTCAGC
GGACTGCCATCGCGTGTCGTTATTGCCGGAGACGGAAGATTCGTTGCTCG
GGATTTGAAAGCTCTCAGGATGGACGCTGCAGCAACTGCATCCGCTTCAA
CCAGGAGTGCATGTTCACGCCAGTCTCATCCCAGGCGCAAGCCTTTGTAC
CTGCCCATGCCGCCTACCCGCACCTACGGAATGCCCAAAACCAAGGCCGC
GGACCGCCTCCTGGAGGAGTGATGCTCTATGGTGCCCATGGCCAGCCTCT
CCCACCACAGCAGCAGCCGGAGAGTACACTTCCATCCGCGTACCCTCCTC
AATACGCAAACGCTCCTCCTCTACCCAATGGAGCTCAGGATCATAGGCCT
GTCGGTCGTCGAGGATCAAGCTCCGGTTTTGAATATCCCGATCCCACAAA
TCTCGCCCCGGTAACACCCGCTTCATCTGCCTCTGGCTATCAGACGTATA
GTGCGACGAGTCCATACTACCCGCCGCCTCCTCAGCATGAGCGACGTACC
TCTCCGCAATCTAGTTACCCCTATGATGGTCGCCATTCCTCGTCTCCTCA
CAGCTCCCCGTATCCCCCTGTTCACCCCAACCAAGGGGCGATGACTCCTC
CCCCTACTTCCACCCCGGGTGTTTCATCTCGCGGTGGACTGAACGTGCGA
GATATGTTGAACCCTGGAGAAGGTCAGAACCCGGGCCAAGGTCGTTCTAG
CACCGATAGTGACATGCTCAATGCATTGAACCGTCGGGGCCTAGGCCAAT
AGATGTCCGGCAACCCCAACGACCACAACGACCCGAACCGGCAGGGCCCG
TACCGCAATCCCAACGATTTCAACGATCCTAATCGGCCGGGACAGTATCC
GCCTCCACCGCAATGGAATACTAGTCAACCTGAGCAGCCTGCTGACGGCC
AAGCTCCTCACTATCCGCCATCCTCTCAGTATCCTTATCCTCCGGCTTCG
TACCCTCCAACTTCATATCCCCCGACTTCCTATCCACCACCAGAGCACCA
ATACCCGCCTGCACCTGGGCAGTATCCGCCTCCGCCGAACATGGCAGCTA
TCCCCCCTCCACAGTCGCAGGACCCCTACCGCATGGCACCCCCTCCCGGC
TCCTACCGCCCCCCAGACATGTACAGCGCACCCCCTCCGCCTCAAGTAGT
CTACCAAGCTGCTGCTCCCCGTCAGCGGACTGCCATCGCGTGTCGTTATT
GCCGGAGACGGAAGATTCGTTGCTCGGGATTTGAAAGCTCTCAGGATGGA
CGCTGCAGCAACTGCATCCGCTTCAACCAGGAGTGCATGTTCACGCCAGT
CTCATCCCAGGCGCAAGCCTTTGTACCTGCCCATGCCGCCTACCCGCACC
TACGGAATGCCCAAAACCAAGGCCGCGGACCGCCTCCTGGAGGAGTGATG
CTCTATGGTGCCCATGGCCAGCCTCTCCCACCACAGCAGCAGCCGGAGAG
TACACTTCCATCCGCGTACCCTCCTCAATACGCAAACGCTCCTCCTCTAC
CCAATGGAGCTCAGGATCATAGGCCTGTCGGTCGTCGAGGATCAAGCTCC
GGTTTTGAATATCCCGATCCCACAAATCTCGCCCCGGTAACACCCGCTTC
ATCTGCCTCTGGCTATCAGACGTATAGTGCGACGAGTCCATACTACCCGC
CGCCTCCTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTTACCCCTAT
GATGGTCGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCCCCTGTTCA
CCCCAACCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCCGGGTGTTT
CATCTCGCGGTGGACTGAACGTGCGAGATATGTTGAACCCTGGAGAAGGT
CAGAACCCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATGCTCAATGC
ATTGAACCGTCGGGGCCTAGGCCAATAGATGTCCGGCAACCCCAACGACC
ACAACGACCCGAACCGGCAGGGCCCGTACCGCAATCCCAACGATTTCAAC
GATCCTAATCGGCCGGGACAGTATCCGCCTCCACCGCAATGGAATACTAG
TCAACCTGAGCAGCCTGCTGACGGCCAAGCTCCTCACTATCCGCCATCCT
CTCAGTATCCTTATCCTCCGGCTTCGTACCCTCCAACTTCATATCCCCCG
ACTTCCTATCCACCACCAGAGCACCAATACCCGCCTGCACCTGGGCAGTA
TCCGCCTCCGCCGAACATGGCAGCTATCCCCCCTCCACAGTCGCAGGACC
CCTACCGCATGGCACCCCCTCCCGGCTCCTACCGCCCCCCAGACATGTAC
AGCGCACCCCCTCCGCCTCAAGTAGTCTACCAAGCTGCTGCTCCCCGTCA
GCGGACTGCCATCGCGTGTCGTTATTGCCGGAGACGGAAGATTCGTTGCT
CGGGATTTGAAAGCTCTCAGGATGGACGCTGCAGCAACTGCATCCGCTTC
AACCAGGAGTGCATGTTCACGCCAGTCTCATCCCAGGCGCAAGCCTTTGT
ACCTGCCCATGCCGCCTACCCGCACCTACGGAATGCCCAAAACCAAGGCC
GCGGACCGCCTCCTGGAGGAGTGATGCTCTATGGTGCCCATGGCCAGCCT
CTCCCACCACAGCAGCAGCCGGAGAGTACACTTCCATCCGCGTACCCTCC
TCAATACGCAAACGCTCCTCCTCTACCCAATGGAGCTCAGGATCATAGGC
CTGTCGGTCGTCGAGGATCAAGCTCCGGTTTTGAATATCCCGATCCCACA
AATCTCGCCCCGGTAACACCCGCTTCATCTGCCTCTGGCTATCAGACGTA
TAGTGCGACGAGTCCATACTACCCGCCGCCTCCTCAGCATGAGCGACGTA
CCTCTCCGCAATCTAGTTACCCCTATGATGGTCGCCATTCCTCGTCTCCT
CACAGCTCCCCGTATCCCCCTGTTCACCCCAACCAAGGGGCGATGACTCC
TCCCCCTACTTCCACCCCGGGTGTTTCATCTCGCGGTGGACTGAACGTGC
GAGATATGTTGAACCCTGGAGAAGGTCAGAACCCGGGCCAAGGTCGTTCT
AGCACCGATAGTGACATGCTCAATGCATTGAACCGTCGGGGCCTAGGCCA
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2014583..2016108 + |
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