|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2344998..2345960- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008166-T1 ID=CBS51388_008166-T1|Name=CBS51388_008166-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=963bp|location=Sequence derived from alignment at An12:2344998..2345960- (Aspergillus niger CBS 513.88)
ATGCCCATTTTCGACGCAACAGCCACCAGCGAACAGGTCATCGAAGCCTT
CAAGTCTAACATCAAAGGCAAGACCTTCGTCATCACCGGCGCCGGCAAGC
CCAGTATCGGCAGCCAGATGGCTACATCTCTAGCCAAAGCCGGGCCATCA
CATATCCTCATTGCCTCACGCACCCTCAGCAAAGTTCATCCAGTTTTGGA
TGAGATCCACACCATCGACAGCACCATAAAAACTACAGCGGTAGAGGTGG
ACCTGACAGATCATGAATCCGTTCGCCGCGCCGCAGGTGAGATTCTCGCC
GCGGCACCCAAGATCGATGTCCTGATCAACAGCGCCGGGGTCATGGCAAT
CAAGGAATACACCCTCGACAAGCAGGGGATAGAGCTACAACTCTCTGCCA
ACCACGTTGGTCACTTCTTACTCACCAACATGCTCATCCCGGCTCTCATA
TCTGCTGGATCCGCGCGCGTGGTCAATCTAACTAGCGCCGGGTACCTCGT
CTCGCCATTCCGGTTCGAAGACTGGAACTATTCCAACGGAAAAGAATACG
ACCCGTGGACTGGGTACGGGCAGGCTAAAACAGCCAATATCTTATTCACC
TATGGCTTCAGCCAGCGGCTAAAGCATAAGGGGATTGCAGCCGTTGCTGT
TCATCCAGGCTATAACGGAGATACTAAACTTGGCAGTCACCTTACTTGGG
TCGATTACGCTAAGATCTATGCGGTTGCGATACGGAATACCGGCAAGGAG
TTTGTTTTCGAGGAGCCTCGGTTCAAAACGTATACCCAGATTGCGGCTAC
TCCGTTGATTGCCGCTTTGGATCCGGAGTTGCAGGCTCTGGCGCCGGTGT
ACATGCAGAATAGTGTGGTTAGTGAGGCTGCGGAGCATGCTCGGGATCCT
GCGAGTGCTGATGCTTTGTGGAGGTTGAGTGAGGGGCTTGTTGGGCAGGA
GTTTCGGTATTAG back to topCoding sequence (CDS) from alignment at An12:2344998..2345960- >CBS51388_008166-T1 ID=CBS51388_008166-T1|Name=CBS51388_008166-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=963bp|location=Sequence derived from alignment at An12:2344998..2345960- (Aspergillus niger CBS 513.88)
ATGCCCATTTTCGACGCAACAGCCACCAGCGAACAGGTCATCGAAGCCTT
CAAGTCTAACATCAAAGGCAAGACCTTCGTCATCACCGGCGCCGGCAAGC
CCAGTATCGGCAGCCAGATGGCTACATCTCTAGCCAAAGCCGGGCCATCA
CATATCCTCATTGCCTCACGCACCCTCAGCAAAGTTCATCCAGTTTTGGA
TGAGATCCACACCATCGACAGCACCATAAAAACTACAGCGGTAGAGGTGG
ACCTGACAGATCATGAATCCGTTCGCCGCGCCGCAGGTGAGATTCTCGCC
GCGGCACCCAAGATCGATGTCCTGATCAACAGCGCCGGGGTCATGGCAAT
CAAGGAATACACCCTCGACAAGCAGGGGATAGAGCTACAACTCTCTGCCA
ACCACGTTGGTCACTTCTTACTCACCAACATGCTCATCCCGGCTCTCATA
TCTGCTGGATCCGCGCGCGTGGTCAATCTAACTAGCGCCGGGTACCTCGT
CTCGCCATTCCGGTTCGAAGACTGGAACTATTCCAACGGAAAAGAATACG
ACCCGTGGACTGGGTACGGGCAGGCTAAAACAGCCAATATCTTATTCACC
TATGGCTTCAGCCAGCGGCTAAAGCATAAGGGGATTGCAGCCGTTGCTGT
TCATCCAGGCTATAACGGAGATACTAAACTTGGCAGTCACCTTACTTGGG
TCGATTACGCTAAGATCTATGCGGTTGCGATACGGAATACCGGCAAGGAG
TTTGTTTTCGAGGAGCCTCGGTTCAAAACGTATACCCAGATTGCGGCTAC
TCCGTTGATTGCCGCTTTGGATCCGGAGTTGCAGGCTCTGGCGCCGGTGT
ACATGCAGAATAGTGTGGTTAGTGAGGCTGCGGAGCATGCTCGGGATCCT
GCGAGTGCTGATGCTTTGTGGAGGTTGAGTGAGGGGCTTGTTGGGCAGGA
GTTTCGGTATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.7 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2344998..2345960 - |
|
