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CBS51388_008170-T1, CBS51388_008170-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008170-T1
Unique NameCBS51388_008170-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:2352336..2353426-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008170-T1 ID=CBS51388_008170-T1|Name=CBS51388_008170-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1091bp|location=Sequence derived from alignment at An12:2352336..2353426- (Aspergillus niger CBS 513.88)
ATGCAAGACAAAGCCAACATCCTGCTAATTGGCTGTGGTGGCATCGGCAC
TATCGCTGCGCTGAACCTGGAACTTGGAGGCAAAGCCATTGTCACTGCTG
TTCTGCGTTCAAATTACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGG
TCGATCGATCACGGCGAAGTGAAGGGCTTCCGACCGTCAATCCGTATGCA
GCCATCCAACTCCACATCAGCAGATTCCCACTGACAGTCGCCTTGACAGT
ACGAAACACCATCCCAGACGTTGAGAAAGAAAATCTCCCCCCGTACAGGT
ACATCGTCGTCACCACCAAGAACTACGCCGATGTGCCCCCGACCGTAGCA
GAGATCATCCGCCCCGCCGTCACCCGGGGTTACACACGCATCGCTCTCGT
CCAGAATGGCCTGAACATAGAAAAGCCCCTCATTGCGGCCTTCCCAGAAA
ATATCATCCTCTCGGGCGTCAGCTTCTGTGGCTCCCATCAGGTCTCCATA
GGAGAGATCGTCCACGAAGACGATGACGAACTCTACGTGGGAGCCTTCCG
CAATCCAAACCTGAATCCCGACGAAGAAGACGCAGCCGCCAAAGAATACT
GTGAGATCTATGGGGCAGGTGGAAAGTGCAATCCTCAGTTTAACCCCAAC
GTCGGCTTCAGTCGCTGGCGGAAGCTGCTGTACAATGCCTGCTTGAACAC
CATCTGTGCCGTCACGGATCTCGACACCGGTCGGATTCAGCTGGCAGACG
GCGCCATTGAAAATCTGGTCCGACCGGCCATGGAGGAGATTCGCGCTGGT
GCCAAGGCATGTGGACATGAGTTGCCACCCGAGCTGGTGGACTTTATGAT
CACGATGGATCCCATTACCATGTACAATCCACCCAGCATGCAGGTGGACA
TACGCAATGGCCGGTTCTGTGAGTATGAGAACATTGTGGGAGAGGCATTA
AAGGAAGGCAAAGCCAGAGGGGTCCCAATGCCGACATTAACGGTATTGTA
TGGCCTTCTCAAGGCCATCCAGTGGCGTACCAAGGAGAGGAAAGGGCTGG
TGGAGATTCCAAAGCCGGAGGACCACACCATCAAGATGTGA
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Coding sequence (CDS) from alignment at An12:2352336..2353426-

>CBS51388_008170-T1 ID=CBS51388_008170-T1|Name=CBS51388_008170-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2070bp|location=Sequence derived from alignment at An12:2352336..2353426- (Aspergillus niger CBS 513.88)
TACGAAACACCATCCCAGACGTTGAGAAAGAAAATCTCCCCCCGTACAGG
TACATCGTCGTCACCACCAAGAACTACGCCGATGTGCCCCCGACCGTAGC
AGAGATCATCCGCCCCGCCGTCACCCGGGGTTACACACGCATCGCTCTCG
TCCAGAATGGCCTGAACATAGAAAAGCCCCTCATTGCGGCCTTCCCAGAA
AATATCATCCTCTCGGGCGTCAGCTTCTGTGGCTCCCATCAGGTCTCCAT
AGGAGAGATCGTCCACGAAGACGATGACGAACTCTACGTGGGAGCCTTCC
GCAATCCAAACCTGAATCCCGACGAAGAAGACGCAGCCGCCAAAGAATAC
TGTGAGATCTATGGGGCAGGTGGAAAGTGCAATCCTCAGTTTAACCCCAA
CGTCGGCTTCAGTCGCTGGCGGAAGCTGCTGTACAATGCCTGCTTGAACA
CCATCTGTGCCGTCACGGATCTCGACACCGGTCGGATTCAGCTGGCAGAC
GGCGCCATTGAAAATCTGGTCCGACCGGCCATGGAGGAGATTCGCGCTGG
TGCCAAGGCATGTGGACATGAGTTGCCACCCGAGCTGGTGGACTTTATGA
TCACGATGGATCCCATTACCATGTACAATCCACCCAGCATGCAGGTGGAC
ATACGCAATGGCCGGTTCTGTGAGTATGAGAACATTGTGGGAGAGGCATT
AAAGGAAGGCAAAGCCAGAGGGGTCCCAATGCCGACATTAACGGTATTGT
ATGGCCTTCTCAAGGCCATCCAGTGGCGTACCAAGGAGAGGAAAGGGCTG
GTGGAGATTCCAAAGCCGGAGGACCACACCATCAAGATGTGAATGCAAGA
CAAAGCCAACATCCTGCTAATTGGCTGTGGTGGCATCGGCACTATCGCTG
CGCTGAACCTGGAACTTGGAGGCAAAGCCATTGTCACTGCTGTTCTGCGT
TCAAATTACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGGTCGATCGA
TCACGGCGAAGTGAAGGGCTTCCGACCGTCAATCCTACGAAACACCATCC
CAGACGTTGAGAAAGAAAATCTCCCCCCGTACAGGTACATCGTCGTCACC
ACCAAGAACTACGCCGATGTGCCCCCGACCGTAGCAGAGATCATCCGCCC
CGCCGTCACCCGGGGTTACACACGCATCGCTCTCGTCCAGAATGGCCTGA
ACATAGAAAAGCCCCTCATTGCGGCCTTCCCAGAAAATATCATCCTCTCG
GGCGTCAGCTTCTGTGGCTCCCATCAGGTCTCCATAGGAGAGATCGTCCA
CGAAGACGATGACGAACTCTACGTGGGAGCCTTCCGCAATCCAAACCTGA
ATCCCGACGAAGAAGACGCAGCCGCCAAAGAATACTGTGAGATCTATGGG
GCAGGTGGAAAGTGCAATCCTCAGTTTAACCCCAACGTCGGCTTCAGTCG
CTGGCGGAAGCTGCTGTACAATGCCTGCTTGAACACCATCTGTGCCGTCA
CGGATCTCGACACCGGTCGGATTCAGCTGGCAGACGGCGCCATTGAAAAT
CTGGTCCGACCGGCCATGGAGGAGATTCGCGCTGGTGCCAAGGCATGTGG
ACATGAGTTGCCACCCGAGCTGGTGGACTTTATGATCACGATGGATCCCA
TTACCATGTACAATCCACCCAGCATGCAGGTGGACATACGCAATGGCCGG
TTCTGTGAGTATGAGAACATTGTGGGAGAGGCATTAAAGGAAGGCAAAGC
CAGAGGGGTCCCAATGCCGACATTAACGGTATTGTATGGCCTTCTCAAGG
CCATCCAGTGGCGTACCAAGGAGAGGAAAGGGCTGGTGGAGATTCCAAAG
CCGGAGGACCACACCATCAAGATGTGAATGCAAGACAAAGCCAACATCCT
GCTAATTGGCTGTGGTGGCATCGGCACTATCGCTGCGCTGAACCTGGAAC
TTGGAGGCAAAGCCATTGTCACTGCTGTTCTGCGTTCAAATTACGAGCAT
GTCAAAGCTCACGGCTTCTCCATCAGGTCGATCGATCACGGCGAAGTGAA
GGGCTTCCGACCGTCAATCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015940pantothenate biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:00086772-dehydropantoate 2-reductase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008170CBS51388_008170Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008170-T1CBS51388_008170-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008170-T1.cdsCBS51388_008170-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008170-T1.exon2CBS51388_008170-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008170-T1.exon1CBS51388_008170-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_12.7
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR013332
DBxrefInterPro:IPR003710
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR013752
DBxrefPFAM:PF08546
DBxrefPFAM:PF02558
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:2352336..2353426 -
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