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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:2357630..2359246+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008173-T1 ID=CBS51388_008173-T1|Name=CBS51388_008173-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1617bp|location=Sequence derived from alignment at An12:2357630..2359246+ (Aspergillus niger CBS 513.88)
ATGACCAAGTCTCCTGACGAAAAACCCCTCGAGGTGCTCGACCGCACGTC
TTCCTGTGCTGAAGGTCAGATCGTCACCCACGATGCCCTCGTCACCCAGC
GTGGCATCAAGTCCCGCCACGCCCAGATGATGGCCATCGGCGGCACCATA
GGCACAGGTCTCTTTGTGGGAGTAGGAGAGGTGCTCGCGCTGGCCGGACC
AGCCAACATCCTGCTCGCCTACGTCACCATCTGCATCATTGTCTACGCCA
TCATCACCGCCACCAACGAAATGAACACTTACCTCCCCTTCAGCGGCTGC
TCAATGGCCGCCTACGGCACCCGCTTCGTATCTCCCAGCTTGGGCTTCGC
CATGGGCCTCCTCTACTGGTACAGCTTCGGCATCCTCGTCGCCTACGAAA
CCACGGCCGCCGCCCTCGTCATCAACTACTGGTCCAACCCCGTCCCCCTG
GCCGTCTGGATCACCCTCATGCTTATCGTCGTCCTCGCCCTGAACTTCTT
CCCTGTAAAAGTCTACGGCGAGACCGAATTCTGGTTCGCCTCCCTCAAAG
TCTTCCTCATCATCGGCCTCCTCATCCTCTCCTTCGTCCTCTTCCTCGGC
GGCGGTCCCAACCACACCCGTCTAGGCTTCCACTACTGGAAATCCCCCGG
CGCCTTCAACACCTACCTCGTTTCCGGCTCCACCGGCCGCTTCTGCGCCT
TCCTCTACACTCTCTGCTACTCCGTCTTCTCCTTCAACTTCGCCCCGGAA
CTCCTCGTTGTCGCCGCAGGCGAAATGCAAAACCCCCGCAAGAACCTACC
CCGCGCCGCGAAACAGTACTTCTATCGCCTTATCATCTTCTACATCCTCG
GCGTCCTCGCCATCGGCGTCATCTGCCCCAGTAATGCCTCCGGCTTGACA
AACGGCACCGGCGTCGCCGCCTCGCCCTGGGTCATCGCCATTAAACGCGC
CGGTATTCATGGCCTCGACTCCGTCGTCAACGCCGTCATCATCACCTCCG
CCTGGTCCTCCGCGAACTCCTACCTCTACATGTCCAGTCGGACACTATAT
TCCCTTGCGAGGGCAGGCAGTGCTCCGAAGATCTTCACCCGCTGCACCCG
CCACGGCGTGCCCTACTATGCTGTGTTGTGCAGCTCGCTGTTCTCGTTGC
TAGCGTATATGGACTGTAGTTCTGGCGCTAGCACGGCGTTTAATTGGTTC
GTGAGTCTCACTAACACGGCGGGGTTTACGTCCTGGACGTGCTGTGGGAT
TATATTCTTGAGGTTCCGGGCGGCGTGTAATGCCCAGGGTTTGAAGGATC
TTCCGTATCGATCGAGATTGCAGCCGTGGATGGGGATTATTGCGACGATG
GCTTGCCCGATCTTGCTGCTGTGTAATGGATTTGAGGTCTTCTTTCATGG
TCATTGGAGCGTGTCGTCGTTTTTGACTTCGTATGTTGGACTGTTTGTCT
TTGTGGCAGTTTATGCTGGACATCGGGTGATGAGGTGGAGGGATGGGTGG
TGGATTTCCGCTGAGAAGGTGGATTTGGTGAGTGGATTGGAGGAGGTGGA
GGCTTTGGGGGTGGATGGGGATGATGACGGGGAGAAGAAAGGGTTTTGGA
GGAGGTTGTGGGAGTAG back to topCoding sequence (CDS) from alignment at An12:2357630..2359246+ >CBS51388_008173-T1 ID=CBS51388_008173-T1|Name=CBS51388_008173-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1617bp|location=Sequence derived from alignment at An12:2357630..2359246+ (Aspergillus niger CBS 513.88)
ATGACCAAGTCTCCTGACGAAAAACCCCTCGAGGTGCTCGACCGCACGTC
TTCCTGTGCTGAAGGTCAGATCGTCACCCACGATGCCCTCGTCACCCAGC
GTGGCATCAAGTCCCGCCACGCCCAGATGATGGCCATCGGCGGCACCATA
GGCACAGGTCTCTTTGTGGGAGTAGGAGAGGTGCTCGCGCTGGCCGGACC
AGCCAACATCCTGCTCGCCTACGTCACCATCTGCATCATTGTCTACGCCA
TCATCACCGCCACCAACGAAATGAACACTTACCTCCCCTTCAGCGGCTGC
TCAATGGCCGCCTACGGCACCCGCTTCGTATCTCCCAGCTTGGGCTTCGC
CATGGGCCTCCTCTACTGGTACAGCTTCGGCATCCTCGTCGCCTACGAAA
CCACGGCCGCCGCCCTCGTCATCAACTACTGGTCCAACCCCGTCCCCCTG
GCCGTCTGGATCACCCTCATGCTTATCGTCGTCCTCGCCCTGAACTTCTT
CCCTGTAAAAGTCTACGGCGAGACCGAATTCTGGTTCGCCTCCCTCAAAG
TCTTCCTCATCATCGGCCTCCTCATCCTCTCCTTCGTCCTCTTCCTCGGC
GGCGGTCCCAACCACACCCGTCTAGGCTTCCACTACTGGAAATCCCCCGG
CGCCTTCAACACCTACCTCGTTTCCGGCTCCACCGGCCGCTTCTGCGCCT
TCCTCTACACTCTCTGCTACTCCGTCTTCTCCTTCAACTTCGCCCCGGAA
CTCCTCGTTGTCGCCGCAGGCGAAATGCAAAACCCCCGCAAGAACCTACC
CCGCGCCGCGAAACAGTACTTCTATCGCCTTATCATCTTCTACATCCTCG
GCGTCCTCGCCATCGGCGTCATCTGCCCCAGTAATGCCTCCGGCTTGACA
AACGGCACCGGCGTCGCCGCCTCGCCCTGGGTCATCGCCATTAAACGCGC
CGGTATTCATGGCCTCGACTCCGTCGTCAACGCCGTCATCATCACCTCCG
CCTGGTCCTCCGCGAACTCCTACCTCTACATGTCCAGTCGGACACTATAT
TCCCTTGCGAGGGCAGGCAGTGCTCCGAAGATCTTCACCCGCTGCACCCG
CCACGGCGTGCCCTACTATGCTGTGTTGTGCAGCTCGCTGTTCTCGTTGC
TAGCGTATATGGACTGTAGTTCTGGCGCTAGCACGGCGTTTAATTGGTTC
GTGAGTCTCACTAACACGGCGGGGTTTACGTCCTGGACGTGCTGTGGGAT
TATATTCTTGAGGTTCCGGGCGGCGTGTAATGCCCAGGGTTTGAAGGATC
TTCCGTATCGATCGAGATTGCAGCCGTGGATGGGGATTATTGCGACGATG
GCTTGCCCGATCTTGCTGCTGTGTAATGGATTTGAGGTCTTCTTTCATGG
TCATTGGAGCGTGTCGTCGTTTTTGACTTCGTATGTTGGACTGTTTGTCT
TTGTGGCAGTTTATGCTGGACATCGGGTGATGAGGTGGAGGGATGGGTGG
TGGATTTCCGCTGAGAAGGTGGATTTGGTGAGTGGATTGGAGGAGGTGGA
GGCTTTGGGGGTGGATGGGGATGATGACGGGGAGAAGAAAGGGTTTTGGA
GGAGGTTGTGGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.7 |
| Note | SMCOG1038:phenylalanine-specific permease |
| DBxref | InterPro:IPR004841 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:2357630..2359246 + |
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