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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:160155..162020- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008292-T1 ID=CBS51388_008292-T1|Name=CBS51388_008292-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1866bp|location=Sequence derived from alignment at An13:160155..162020- (Aspergillus niger CBS 513.88)
ATGGTGCAACAACCCTCTTCGGCTCAGACCCCGACGAGGCGGAGATGCAG
ACGAGAAGGCGCCAAGTGGACACGGTCTGGCTGCTTGACATGCAAGCGTC
GTCGGAAGCGGTGTGATGAAGCGAAACCCTGGTATGATGGAGTCCGTCCC
TGGTACTAGGTTACACTAGGCACTAACTGCTTGATTACAATAGCTGTCAT
AGCTGCGCCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCAATGTGGGC
AGAGCCTTTAGATCCATCGGCAAATGTCTTCAATCAGTTCAGAGCACCAA
AACGGCGCAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCTCGCGTGGC
CCGGAAGAAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCGAGCAGTCT
ATCAACAGCGCCAACAACTCCGGCTGATTCTGACAACAACAGTCTATACT
CTTGGAATAATGAAGACAATGAATATGGAGACATGCAGGTTACAATACCT
AACATTGACGCCTGCGATACACTCACCGTCGCTCCACCCATACCAAGTAG
GTACTTTAGTCATCTGTCGCATCATGATACGCACTATCTCCAGTATCACA
CCGAGCTGGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCGACAATCCT
CTTCGATCGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTTCTGATGAA
GGCCCTGTGTGCGGTATCTGCAACGCATTTTGCAAATCGGTCCCGGGACA
AACAGGAGGCCCAAACAGCCGCGACAGACTACTACGTTCGAACACTGAGT
GGGCTGCAGTTGACAATTGCTAAATATTCACCGCGGAGTCTTCCCGATGA
GGCCATTCTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGTACGCGGAA
GTGTTCAGCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGCTCATAATG
GCTCGGGGTGGAGTTGATGCTCTCAACGATGACATGAGAGAATTCTTAAG
CGGCTTGTAAGACCTTCTCTACAACCAAGCCGCCTTGAACGAGAGCTAAC
CCCACCATAGCTACGTCTACGCCTATAACATGGCTAGAATTAACAACCGC
AAACACATCAACTATGACCTTAACATTGGCAACGTCAAAATCTCCAAGCT
CGACATCTACATCGGCTACGCAGAAGACCTCATCAAGATCTGTGCCCGAA
TAGCCGACCTCCCCACACTGTCCGAAGACCCTGTAGCTTTGGACCTAGAA
GTCCACTCGATGTAAGTAAACCCTCAACAACATACACAACCAAAGCTAAC
AAACAACCACACGCAGAGACACATCCCTCCGCGACTGGGCCCCCACCAAC
ACCACATACATCATCCCACGAGGCATAACTGAATCAAACCTCGTCCGTCT
CCGCATGGTAGCCAACTGCTTCCGCGACGCCGCATACCTCTATCTTCATT
CTACCCTGGAGAGACTGAACCAGGGAATGGCGTCACCGCCATCATTACCA
CTTGCTACTCCGTTACCATTGGCACTACAAGCGTCATCCAAATTAGTACC
GGCGCCATCACCATCCATCTCCCTCCCCCGATCAACCGCACTACACCAAC
TTCTAAGCAGAATCAGGGCTTTCCCACTCGACGAACACTGTGAATACTCT
GCCCTTACATTCCCACTCTTCATCGCCGGCTGCGAGAGCAGGGATCCTGC
AGACCAGGAGCTCATTATACAGTCATTGAGTAAGTTAGAGGCGAACTTTG
GCATCGGGAATGTAAGAAGAGCAAAGGAGATGTTGAGTATCCTGTGGGCT
GGAGAAGGGGATGTGCATTGGTTGGACATGTTGGAGCGGTTACAGTGGGA
TTTGATTCTCGCTTAG back to topCoding sequence (CDS) from alignment at An13:160155..162020- >CBS51388_008292-T1 ID=CBS51388_008292-T1|Name=CBS51388_008292-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6780bp|location=Sequence derived from alignment at An13:160155..162020- (Aspergillus niger CBS 513.88)
AGACACATCCCTCCGCGACTGGGCCCCCACCAACACCACATACATCATCC
CACGAGGCATAACTGAATCAAACCTCGTCCGTCTCCGCATGGTAGCCAAC
TGCTTCCGCGACGCCGCATACCTCTATCTTCATTCTACCCTGGAGAGACT
GAACCAGGGAATGGCGTCACCGCCATCATTACCACTTGCTACTCCGTTAC
CATTGGCACTACAAGCGTCATCCAAATTAGTACCGGCGCCATCACCATCC
ATCTCCCTCCCCCGATCAACCGCACTACACCAACTTCTAAGCAGAATCAG
GGCTTTCCCACTCGACGAACACTGTGAATACTCTGCCCTTACATTCCCAC
TCTTCATCGCCGGCTGCGAGAGCAGGGATCCTGCAGACCAGGAGCTCATT
ATACAGTCATTGAGTAAGTTAGAGGCGAACTTTGGCATCGGGAATGTAAG
AAGAGCAAAGGAGATGTTGAGTATCCTGTGGGCTGGAGAAGGGGATGTGC
ATTGGTTGGACATGTTGGAGCGGTTACAGTGGGATTTGATTCTCGCTTAG
CTACGTCTACGCCTATAACATGGCTAGAATTAACAACCGCAAACACATCA
ACTATGACCTTAACATTGGCAACGTCAAAATCTCCAAGCTCGACATCTAC
ATCGGCTACGCAGAAGACCTCATCAAGATCTGTGCCCGAATAGCCGACCT
CCCCACACTGTCCGAAGACCCTGTAGCTTTGGACCTAGAAGTCCACTCGA
TCTGTCATAGCTGCGCCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCA
ATGTGGGCAGAGCCTTTAGATCCATCGGCAAATGTCTTCAATCAGTTCAG
AGCACCAAAACGGCGCAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCT
CGCGTGGCCCGGAAGAAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCG
AGCAGTCTATCAACAGCGCCAACAACTCCGGCTGATTCTGACAACAACAG
TCTATACTCTTGGAATAATGAAGACAATGAATATGGAGACATGCAGGTTA
CAATACCTAACATTGACGCCTGCGATACACTCACCGTCGCTCCACCCATA
CCAAGTAGGTACTTTAGTCATCTGTCGCATCATGATACGCACTATCTCCA
GTATCACACCGAGCTGGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCG
ACAATCCTCTTCGATCGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTT
CTGATGAAGGCCCTGTGTGCGGTATCTGCAACGCATTTTGCAAATCGGTC
CCGGGACAAACAGGAGGCCCAAACAGCCGCGACAGACTACTACGTTCGAA
CACTGAGTGGGCTGCAGTTGACAATTGCTAAATATTCACCGCGGAGTCTT
CCCGATGAGGCCATTCTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGT
ACGCGGAAGTGTTCAGCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGC
TCATAATGGCTCGGGGTGGAGTTGATGCTCTCAACGATGACATGAGAGAA
TTCTTAAGCGGCTTATGGTGCAACAACCCTCTTCGGCTCAGACCCCGACG
AGGCGGAGATGCAGACGAGAAGGCGCCAAGTGGACACGGTCTGGCTGCTT
GACATGCAAGCGTCGTCGGAAGCGGTGTGATGAAGCGAAACCCTGAGACA
CATCCCTCCGCGACTGGGCCCCCACCAACACCACATACATCATCCCACGA
GGCATAACTGAATCAAACCTCGTCCGTCTCCGCATGGTAGCCAACTGCTT
CCGCGACGCCGCATACCTCTATCTTCATTCTACCCTGGAGAGACTGAACC
AGGGAATGGCGTCACCGCCATCATTACCACTTGCTACTCCGTTACCATTG
GCACTACAAGCGTCATCCAAATTAGTACCGGCGCCATCACCATCCATCTC
CCTCCCCCGATCAACCGCACTACACCAACTTCTAAGCAGAATCAGGGCTT
TCCCACTCGACGAACACTGTGAATACTCTGCCCTTACATTCCCACTCTTC
ATCGCCGGCTGCGAGAGCAGGGATCCTGCAGACCAGGAGCTCATTATACA
GTCATTGAGTAAGTTAGAGGCGAACTTTGGCATCGGGAATGTAAGAAGAG
CAAAGGAGATGTTGAGTATCCTGTGGGCTGGAGAAGGGGATGTGCATTGG
TTGGACATGTTGGAGCGGTTACAGTGGGATTTGATTCTCGCTTAGCTACG
TCTACGCCTATAACATGGCTAGAATTAACAACCGCAAACACATCAACTAT
GACCTTAACATTGGCAACGTCAAAATCTCCAAGCTCGACATCTACATCGG
CTACGCAGAAGACCTCATCAAGATCTGTGCCCGAATAGCCGACCTCCCCA
CACTGTCCGAAGACCCTGTAGCTTTGGACCTAGAAGTCCACTCGATCTGT
CATAGCTGCGCCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCAATGTG
GGCAGAGCCTTTAGATCCATCGGCAAATGTCTTCAATCAGTTCAGAGCAC
CAAAACGGCGCAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCTCGCGT
GGCCCGGAAGAAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCGAGCAG
TCTATCAACAGCGCCAACAACTCCGGCTGATTCTGACAACAACAGTCTAT
ACTCTTGGAATAATGAAGACAATGAATATGGAGACATGCAGGTTACAATA
CCTAACATTGACGCCTGCGATACACTCACCGTCGCTCCACCCATACCAAG
TAGGTACTTTAGTCATCTGTCGCATCATGATACGCACTATCTCCAGTATC
ACACCGAGCTGGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCGACAAT
CCTCTTCGATCGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTTCTGAT
GAAGGCCCTGTGTGCGGTATCTGCAACGCATTTTGCAAATCGGTCCCGGG
ACAAACAGGAGGCCCAAACAGCCGCGACAGACTACTACGTTCGAACACTG
AGTGGGCTGCAGTTGACAATTGCTAAATATTCACCGCGGAGTCTTCCCGA
TGAGGCCATTCTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGTACGCG
GAAGTGTTCAGCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGCTCATA
ATGGCTCGGGGTGGAGTTGATGCTCTCAACGATGACATGAGAGAATTCTT
AAGCGGCTTATGGTGCAACAACCCTCTTCGGCTCAGACCCCGACGAGGCG
GAGATGCAGACGAGAAGGCGCCAAGTGGACACGGTCTGGCTGCTTGACAT
GCAAGCGTCGTCGGAAGCGGTGTGATGAAGCGAAACCCTGAGACACATCC
CTCCGCGACTGGGCCCCCACCAACACCACATACATCATCCCACGAGGCAT
AACTGAATCAAACCTCGTCCGTCTCCGCATGGTAGCCAACTGCTTCCGCG
ACGCCGCATACCTCTATCTTCATTCTACCCTGGAGAGACTGAACCAGGGA
ATGGCGTCACCGCCATCATTACCACTTGCTACTCCGTTACCATTGGCACT
ACAAGCGTCATCCAAATTAGTACCGGCGCCATCACCATCCATCTCCCTCC
CCCGATCAACCGCACTACACCAACTTCTAAGCAGAATCAGGGCTTTCCCA
CTCGACGAACACTGTGAATACTCTGCCCTTACATTCCCACTCTTCATCGC
CGGCTGCGAGAGCAGGGATCCTGCAGACCAGGAGCTCATTATACAGTCAT
TGAGTAAGTTAGAGGCGAACTTTGGCATCGGGAATGTAAGAAGAGCAAAG
GAGATGTTGAGTATCCTGTGGGCTGGAGAAGGGGATGTGCATTGGTTGGA
CATGTTGGAGCGGTTACAGTGGGATTTGATTCTCGCTTAGCTACGTCTAC
GCCTATAACATGGCTAGAATTAACAACCGCAAACACATCAACTATGACCT
TAACATTGGCAACGTCAAAATCTCCAAGCTCGACATCTACATCGGCTACG
CAGAAGACCTCATCAAGATCTGTGCCCGAATAGCCGACCTCCCCACACTG
TCCGAAGACCCTGTAGCTTTGGACCTAGAAGTCCACTCGATCTGTCATAG
CTGCGCCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCAATGTGGGCAG
AGCCTTTAGATCCATCGGCAAATGTCTTCAATCAGTTCAGAGCACCAAAA
CGGCGCAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCTCGCGTGGCCC
GGAAGAAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCGAGCAGTCTAT
CAACAGCGCCAACAACTCCGGCTGATTCTGACAACAACAGTCTATACTCT
TGGAATAATGAAGACAATGAATATGGAGACATGCAGGTTACAATACCTAA
CATTGACGCCTGCGATACACTCACCGTCGCTCCACCCATACCAAGTAGGT
ACTTTAGTCATCTGTCGCATCATGATACGCACTATCTCCAGTATCACACC
GAGCTGGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCGACAATCCTCT
TCGATCGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTTCTGATGAAGG
CCCTGTGTGCGGTATCTGCAACGCATTTTGCAAATCGGTCCCGGGACAAA
CAGGAGGCCCAAACAGCCGCGACAGACTACTACGTTCGAACACTGAGTGG
GCTGCAGTTGACAATTGCTAAATATTCACCGCGGAGTCTTCCCGATGAGG
CCATTCTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGTACGCGGAAGT
GTTCAGCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGCTCATAATGGC
TCGGGGTGGAGTTGATGCTCTCAACGATGACATGAGAGAATTCTTAAGCG
GCTTATGGTGCAACAACCCTCTTCGGCTCAGACCCCGACGAGGCGGAGAT
GCAGACGAGAAGGCGCCAAGTGGACACGGTCTGGCTGCTTGACATGCAAG
CGTCGTCGGAAGCGGTGTGATGAAGCGAAACCCTGAGACACATCCCTCCG
CGACTGGGCCCCCACCAACACCACATACATCATCCCACGAGGCATAACTG
AATCAAACCTCGTCCGTCTCCGCATGGTAGCCAACTGCTTCCGCGACGCC
GCATACCTCTATCTTCATTCTACCCTGGAGAGACTGAACCAGGGAATGGC
GTCACCGCCATCATTACCACTTGCTACTCCGTTACCATTGGCACTACAAG
CGTCATCCAAATTAGTACCGGCGCCATCACCATCCATCTCCCTCCCCCGA
TCAACCGCACTACACCAACTTCTAAGCAGAATCAGGGCTTTCCCACTCGA
CGAACACTGTGAATACTCTGCCCTTACATTCCCACTCTTCATCGCCGGCT
GCGAGAGCAGGGATCCTGCAGACCAGGAGCTCATTATACAGTCATTGAGT
AAGTTAGAGGCGAACTTTGGCATCGGGAATGTAAGAAGAGCAAAGGAGAT
GTTGAGTATCCTGTGGGCTGGAGAAGGGGATGTGCATTGGTTGGACATGT
TGGAGCGGTTACAGTGGGATTTGATTCTCGCTTAGCTACGTCTACGCCTA
TAACATGGCTAGAATTAACAACCGCAAACACATCAACTATGACCTTAACA
TTGGCAACGTCAAAATCTCCAAGCTCGACATCTACATCGGCTACGCAGAA
GACCTCATCAAGATCTGTGCCCGAATAGCCGACCTCCCCACACTGTCCGA
AGACCCTGTAGCTTTGGACCTAGAAGTCCACTCGATCTGTCATAGCTGCG
CCAGATTGGGCTTGAAATGTGAGGGTTATGGCTCAATGTGGGCAGAGCCT
TTAGATCCATCGGCAAATGTCTTCAATCAGTTCAGAGCACCAAAACGGCG
CAGAGTTAGCACAGCATCTTCTTCAACGAGTTTCTCGCGTGGCCCGGAAG
AAGAGCTCTGGCTGTACCCGAGCTCCCCAGTATCGAGCAGTCTATCAACA
GCGCCAACAACTCCGGCTGATTCTGACAACAACAGTCTATACTCTTGGAA
TAATGAAGACAATGAATATGGAGACATGCAGGTTACAATACCTAACATTG
ACGCCTGCGATACACTCACCGTCGCTCCACCCATACCAAGTAGGTACTTT
AGTCATCTGTCGCATCATGATACGCACTATCTCCAGTATCACACCGAGCT
GGGCTCCAAGCTACTAGCCAACCTTGAGAGTATCGACAATCCTCTTCGAT
CGTTTCTTATACCTCGAGCCCTGTCATCGCCTCTTCTGATGAAGGCCCTG
TGTGCGGTATCTGCAACGCATTTTGCAAATCGGTCCCGGGACAAACAGGA
GGCCCAAACAGCCGCGACAGACTACTACGTTCGAACACTGAGTGGGCTGC
AGTTGACAATTGCTAAATATTCACCGCGGAGTCTTCCCGATGAGGCCATT
CTAGCAGTGGCCATGCTTTGCAAGTACGAGATCGTACGCGGAAGTGTTCA
GCAGTGGACCGTGCATCTGAACGCCCTGCAAGAGCTCATAATGGCTCGGG
GTGGAGTTGATGCTCTCAACGATGACATGAGAGAATTCTTAAGCGGCTTA
TGGTGCAACAACCCTCTTCGGCTCAGACCCCGACGAGGCGGAGATGCAGA
CGAGAAGGCGCCAAGTGGACACGGTCTGGCTGCTTGACATGCAAGCGTCG
TCGGAAGCGGTGTGATGAAGCGAAACCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:160155..162020 - |
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