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CBS51388_008294-T1, CBS51388_008294-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008294-T1
Unique NameCBS51388_008294-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An13:166073..167631+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008294-T1 ID=CBS51388_008294-T1|Name=CBS51388_008294-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1559bp|location=Sequence derived from alignment at An13:166073..167631+ (Aspergillus niger CBS 513.88)
ATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTCAC
CCCCAACTCTCCCAGCAAGGCCGAAGCCTCCAAAGATCCCAACCTCATCA
CCTGGAACAGCCCCAATGACCCAGAAAACCCCAAGAATTGGCCGAGAGGC
CTAAAGTGGCAAAATACCTGGTCGGTTTCGCTTTTCGTCTTCATCTCGCC
CGTGTCGTCATCAATGATCGCCCCGGCCATGAACGATCTCGCGCAATCGC
TGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTATT
CTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTATA
CGGTCGAGTGCGTTTACTCCAACTCAGCAATGTGTGGTATTTGGCCTGGA
ATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTCGG
TTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATCGGAGGGGGGGC
TATTAGGTGAGTGGGTTACATTTGAAGATGGATTTGAATATATATATAAT
CGGCATTTGCACTCCACTGACTTCAACTGGTACTAGTGATATGTGGTCCG
CGGAAGAACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTG
GGGCCTGTGATTGGACCGATTGCGGGCGGGTTCATTGCCGAGTATTCGAC
CTGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGG
TAGTTGGGTTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTCTACGG
AGGAGACGAGACGTTCTTGCTAAGGAAACAGGAAATGAGGAGCTTCATAC
CGCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGC
GGCCGGTGCGGATGTTCACGACTCAGCCGATTGTCTTCTGTATGGCGCTT
TATATGGCCTATCTCTTCGGCGTGACGTACTTGATGTTTGCGACCTTCCC
GGATATCTGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCA
ATTATCTCTCCATTGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTC
AAGCTGGTGGACCGTATCTACAGGACTCTCAAAGCCCGGAACAATAATAT
AGGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCA
GTACTATCGGGCTCTTCTGGTATGGCTGGAGCATTGGGAATACCCATTGG
ATTATGCCGAATATCGGTGCGCTGATTTACACCATGGGCACCATCTCCTG
CCTGCAGGGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAG
CTAGCGCTATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGA
TTCCCGCTGTTTGCTCCCTATATGTATAACACCCTGGGGTATGGTTGGGG
TACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGT
TTGTTTTCTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCC
TCTGGTTGA
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Coding sequence (CDS) from alignment at An13:166073..167631+

>CBS51388_008294-T1 ID=CBS51388_008294-T1|Name=CBS51388_008294-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2958bp|location=Sequence derived from alignment at An13:166073..167631+ (Aspergillus niger CBS 513.88)
ATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTCAC
CCCCAACTCTCCCAGCAAGGCCGAAGCCTCCAAAGATCCCAACCTCATCA
CCTGGAACAGCCCCAATGACCCAGAAAACCCCAAGAATTGGCCGAGAGGC
CTAAAGTGGCAAAATACCTGGTCGGTTTCGCTTTTCGTCTTCATCTCGCC
CGTGTCGTCATCAATGATCGCCCCGGCCATGAACGATCTCGCGCAATCGC
TGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTATT
CTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTATA
CGGTCGAGTGCGTTTACTCCAACTCAGCAATGTGTGGTATTTGGCCTGGA
ATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTCGG
TTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATCGGAGGGGGGGC
TATTAGTGATATGTGGTCCGCGGAAGAACGGGGGAAAGCTATGGGGGTGT
ATACTCTGGGGCCATTACTGGGGCCTGTGATTGGACCGATTGCGGGCGGG
TTCATTGCCGAGTATTCGACCTGGCGATGGGTGTTTTGGGCTACTTCTGC
TGCTGCTGTCGCAGTGCAGGTAGTTGGGTTTTTCTGGTTGAGAGAGTGCC
ATCCGGGGACGATTCTACGGAGGAGACGAGACGTTCTTGCTAAGGAAACA
GGAAATGAGGAGCTTCATACCGCGGAGAAAGTTGAGACACTCGGCTTCAA
GCTCCTTCATGCGTTTGAGCGGCCGGTGCGGATGTTCACGACTCAGCCGA
TTGTCTTCTGTATGGCGCTTTATATGGCCTATCTCTTCGGCGTGACGTAC
TTGATGTTTGCGACCTTCCCGGATATCTGGACCGACGTCTACCACGAGAG
CTCTGGGATTGGGGGCCTCAATTATCTCTCCATTGCGATTGGAGCGTTCA
TCGGGCTCTTCTTTAACCTCAAGCTGGTGGACCGTATCTACAGGACTCTC
AAAGCCCGGAACAATAATATAGGCAAACCCGAGTTTCGAATGCCGTCGTT
GGCTGTGGGCTCGATCATCAGTACTATCGGGCTCTTCTGGTATGGCTGGA
GCATTGGGAATACCCATTGGATTATGCCGAATATCGGTGCGCTGATTTAC
ACCATGGGCACCATCTCCTGCCTGCAGGGCATGCAGACGTATATTGTTGA
CAGCTATCAAACCTACGCAGCTAGCGCTATGGCTGCCTGTGCCGTGCTGA
GGAGTTTGTGCGGCTTCGGATTCCCGCTGTTTGCTCCCTATATGTATAAC
ACCCTGGGGTATGGTTGGGGTACCAGTGTGTTGGCTTTTACGGCCATGAT
TTTCGGATGGGGAGGGCCGTTTGTTTTCTGGAAATACGGGCCCCGGTTGC
GTGCCATGTCTGAATATGCCTCTGGTTGAATGGCATCCAACCAAGACCAA
GACCTCGAAGCATGCCCCAAAACCCTCACCCCCAACTCTCCCAGCAAGGC
CGAAGCCTCCAAAGATCCCAACCTCATCACCTGGAACAGCCCCAATGACC
CAGAAAACCCCAAGAATTGGCCGAGAGGCCTAAAGTGGCAAAATACCTGG
TCGGTTTCGCTTTTCGTCTTCATCTCGCCCGTGTCGTCATCAATGATCGC
CCCGGCCATGAACGATCTCGCGCAATCGCTGGACATGCATGCGGAAATTG
AGATATATCTTTCATTGAGTATCTTTATTCTCGCGTATGCCATCGGCCCT
GTTTTCTTTGGTCCGGCGTCGGAATTATACGGTCGAGTGCGTTTACTCCA
ACTCAGCAATGTGTGGTATTTGGCCTGGAATCTGGGATGCGGGTTCGCGA
GGACGAAGGGACAGCTTTTTGCGTTTCGGTTTTTGGCGGGGATTGGGGGG
AGTGCGCCGCTGGCTATCGGAGGGGGGGCTATTAGTGATATGTGGTCCGC
GGAAGAACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGG
GGCCTGTGATTGGACCGATTGCGGGCGGGTTCATTGCCGAGTATTCGACC
TGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGT
AGTTGGGTTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTCTACGGA
GGAGACGAGACGTTCTTGCTAAGGAAACAGGAAATGAGGAGCTTCATACC
GCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCG
GCCGGTGCGGATGTTCACGACTCAGCCGATTGTCTTCTGTATGGCGCTTT
ATATGGCCTATCTCTTCGGCGTGACGTACTTGATGTTTGCGACCTTCCCG
GATATCTGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAA
TTATCTCTCCATTGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCA
AGCTGGTGGACCGTATCTACAGGACTCTCAAAGCCCGGAACAATAATATA
GGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAG
TACTATCGGGCTCTTCTGGTATGGCTGGAGCATTGGGAATACCCATTGGA
TTATGCCGAATATCGGTGCGCTGATTTACACCATGGGCACCATCTCCTGC
CTGCAGGGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGC
TAGCGCTATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGAT
TCCCGCTGTTTGCTCCCTATATGTATAACACCCTGGGGTATGGTTGGGGT
ACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTT
TGTTTTCTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCT
CTGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008294CBS51388_008294Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008294-T1.exon1CBS51388_008294-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008294-T1.exon2CBS51388_008294-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008294-T1.cdsCBS51388_008294-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008294-T1CBS51388_008294-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An13supercontigAn13:166073..167631 +
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