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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:168124..170317- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008295-T1 ID=CBS51388_008295-T1|Name=CBS51388_008295-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2194bp|location=Sequence derived from alignment at An13:168124..170317- (Aspergillus niger CBS 513.88)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTAGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCCC
CTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAGG
GACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAAA
CTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCCT
CGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAGC
AACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAACC
GGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGAG
AAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCTA
AGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCTT
CATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAGC
GACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTCG
CCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTCC
AGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGGT
AAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTACA
CTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTGG
ATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATCG
GGACGGCGAAAGCGTCGGATTGCCCCATTTGAGGTCCAGATGCGCCGGCG
GCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATCCG
GCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGCTA
AACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCATGA
AAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCTGT
CAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTACA
ATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTGGA
AGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCCCT
TACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCCGG
TTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACACA
GCAGAGACACTTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAATG
TCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAGCG
TTATTCGTGTGGGATTCCCTCCTTTGTATTCTGAGGAGCATTGCGAAGGT
TGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTCAG
AGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGTAT
GCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCTCG
TAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACACA
AGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATCAA
GCTACAGATGGGGCTTTCTATTTCGATGAGCTTTTCGACGATATGAGCAG
GGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGATT
GGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGA back to topCoding sequence (CDS) from alignment at An13:168124..170317- >CBS51388_008295-T1 ID=CBS51388_008295-T1|Name=CBS51388_008295-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6282bp|location=Sequence derived from alignment at An13:168124..170317- (Aspergillus niger CBS 513.88)
GGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGGTAA
ATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTACACT
CTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTGGAT
TTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATCGGG
ACGGCGAAAGCGTCGGATTGCCCCATTTGAGGTCCAGATGCGCCGGCGGC
TCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATCCGGC
ACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGCTAAA
CATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCATGAAA
AACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCTGTCA
AATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTACAAT
CGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTGGAAG
ACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCCCTTA
CACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCCGGTT
ACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACACAGC
AGAGACACTTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAATGTC
ATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAGCGTT
ATTCGTGTGGGATTCCCTCCTTTGTATTCTGAGGAGCATTGCGAAGGTTG
GATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTCAGAG
GTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGTATGC
TACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCTCGTA
ATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACACAAG
CCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATCAAGC
TACAGATGGGGCTTTCTATTTCGATGAGCTTTTCGACGATATGAGCAGGG
CTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGATTGG
CTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGACCACCCCC
TCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAGGG
ACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAAAC
TGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCCTC
GACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAGCA
ACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAACCG
GTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGAGA
AGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCTAA
GCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCTTC
ATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAGCG
ACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTCGC
CATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATAC
AAGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTT
GTCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAA
TGGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAG
CCTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCC
AACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACG
ACGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGGCCCA
GCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGGTAAATGCCT
CTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTACACTCTCTTC
CTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTGGATTTTGAC
TGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATCGGGACGGCG
AAAGCGTCGGATTGCCCCATTTGAGGTCCAGATGCGCCGGCGGCTCTTTT
GGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATCCGGCACGGGT
ATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGCTAAACATTAA
CGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCATGAAAAACGAG
GCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCTGTCAAATTTC
TACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTACAATCGAGTT
CCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTGGAAGACCTCA
TCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCCCTTACACTTT
CTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCCGGTTACGCGC
GCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACACAGCAGAGAC
ACTTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAATGTCATGTAT
AGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAGCGTTATTCGT
GTGGGATTCCCTCCTTTGTATTCTGAGGAGCATTGCGAAGGTTGGATTTT
ATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTCAGAGGTCTAC
GCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGTATGCTACGAT
TGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCTCGTAATTCAA
CTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACACAAGCCCAAA
GAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATCAAGCTACAGA
TGGGGCTTTCTATTTCGATGAGCTTTTCGACGATATGAGCAGGGCTGATC
CCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGATTGGCTATTC
TGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGACCACCCCCTCGGTT
ATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAGGGACAGAC
TCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAAACTGCTTC
CCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCCTCGACGCT
GGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAGCAACAGAA
CCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAACCGGTCTTC
TTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGAGAAGCGCG
ATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCTAAGCTCTG
GTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCTTCATGTTC
CGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAGCGACTGCC
TCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTCGCCATGCC
ACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACAAGAGA
GCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTGTCCCA
CTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAATGGCTC
CTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGCCTGTG
TGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCAACTGC
ATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGACGCAA
GAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGGCCCAGCTGAT
GCACAAATATCGGACCGCAGTCACTCAGGCATTGGTAAATGCCTCTTGGC
TCAAGACAACCTCGTTGCCGGTTTTACAGGCTTACACTCTCTTCCTTATC
TCCTTGCGCACTCAAATCGATTCTCATACATTCTGGATTTTGACTGGGAT
TGCAATTCGCCTGGCCCAGCGCATAGGATTGCATCGGGACGGCGAAAGCG
TCGGATTGCCCCATTTGAGGTCCAGATGCGCCGGCGGCTCTTTTGGCAGC
TGCTACCCTTGGACAGCTACGCAGGTCAAACATCCGGCACGGGTATATCC
ATCTCACCAGACAGCTGGGATACTAAGCAACCGCTAAACATTAACGATGA
CCAGATGTTCCCCGGCATGAACGAGCCGCCTCATGAAAAACGAGGCGCAT
CAGAGATGATATTTTGCTTGGCTCGGATGGAGCTGTCAAATTTCTACACT
CGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTACAATCGAGTTCCGGAC
CCCCGAGGAGATCGAGCGACTGATTGACGAGGTGGAAGACCTCATCGAGA
AGAAGTTCTTGCGGTACTGCGACATCTTGAACCCCTTACACTTTCTGACC
ACCGGCGTTATGCGATCCGCCATTAGTGCTGTCCGGTTACGCGCGCGGAT
GCCGCTGCTCAAGCAAGAAACTATAACCGACACACAGCAGAGACACTTCT
GCACCCTTGCCGAAAAGGTCCTCGACACCAGAAATGTCATGTATAGTAAT
CCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAGCGTTATTCGTGTGGGA
TTCCCTCCTTTGTATTCTGAGGAGCATTGCGAAGGTTGGATTTTATTCGC
CATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTCAGAGGTCTACGCGAAT
CACGAAGCACTGCGTCAGGGCCGAAGGACCTTGTATGCTACGATTGCTAA
GATCACTTTGAAGGCCTGGTTACTAAACCCGCCTCGTAATTCAACTCCCG
AACCGGATTTTATGACCGCGCTGCGCGCTCAACACAAGCCCAAAGAGATC
GACCAGCGGCATGACAGTACGTTTGCTGCCCATCAAGCTACAGATGGGGC
TTTCTATTTCGATGAGCTTTTCGACGATATGAGCAGGGCTGATCCCAATA
TGAACAATGCCTTCAATCTCGACCCTTCTGCCGATTGGCTATTCTGGGAC
CAAATGTGTGGAGAAACCAGCCTTGGTTGACCACCCCCTCGGTTATCAGC
GGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAGGGACAGACTCCAGG
GACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAAACTGCTTCCCAAGT
ATGGCAATTCTCGCCACATTGACGATGTTCTGCTCCTCGACGCTGGCGAA
GGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAGCAACAGAACCATCA
TGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAACCGGTCTTCTTGGTG
CCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGAGAAGCGCGATAAGC
CTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCTAAGCTCTGGTATGC
CTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCTTCATGTTCCGACTG
TCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAGCGACTGCCTCCAAG
AACGATGAATGCATACTGTTTGCCATTTACCATTTCGCCATGCCACCCAA
ACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACAAGAGAGCGGAT
ACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTGTCCCACTTGCC
TCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAATGGCTCCTGTGA
AACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGCCTGTGTGCGCA
AGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCAACTGCATCAAG
ACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGACGCAAGAGGAA
ACGTAGCCAGGGCGAGGAAGATGTACATGAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:168124..170317 - |
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