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CBS51388_008552-T1, CBS51388_008552-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008552-T1
Unique NameCBS51388_008552-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:18985..19879+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008552-T1 ID=CBS51388_008552-T1|Name=CBS51388_008552-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=895bp|location=Sequence derived from alignment at An14:18985..19879+ (Aspergillus niger CBS 513.88)
ATGGATCAGGATGATACATTGTTCGATTATGATGCCGGCTTAGAGGGCAC
ATTGCAAGATATAGCTGTGGATCCCAAGAGGGATGAACCTATTGCTGCAC
CAGTATTAGGTCTGGATGAAAAGGTCACAATCACTAAGCAGCGACGATTT
ACAGTCAAGTTGGATGAGAGCCGGTGAGACTGACATCCGGCGTAGCGCTC
TGAATACAGGCTTATTGCTTCCTAGGTTACTGTCACACGCCGGAATACCA
AAACTGCGTTCTACAGCGAAGTCGAAACTGAAATTCAAAGGCAAAGGGCA
TGAGGTCTGCTAGAACCGATTTGTATAGTCGCCGAGGGACCACTGCGTGG
CTAACTGTTTTTCAAAGTTTTCGGATGCCGCTCGACTCTTAAATTTTTAT
CAACTATGGCTCGATGATTTGTTCCCTCGTGCGAAGTTCGCCGATGGATT
GGCTATGATAGAGAAACTGGGTCACTCGAAACGCTTGCAGACGATGCGAA
GAGAATGGATAGACGAGGAAAAGCCGAGACTTTCCGCAGCTGACTCTGAA
GATGCGCAACAAGCGAAATCTTCGAGCCCACATACCCGTGACAATAGTAT
GCCTATTGGGCATCTTGAAAAAGCCAACGCTATCATAGGCCGAGGAGATA
ACGTGGCACAGGCGCCCCCAACACAGGGCCTTGGAGAGCCATCTTCACTT
CTGCTAGGAGGCATTCTACAACAGGAGGATTTGTTTGTGTCTGATGATGA
AAGTGTTCCAAGGGAAATCATAGAAGAAGGTGCTCATGAAAATAATGATG
ATGATGATGATGATGAGCTGGAAGCACTTCTTCGGGAGCACGAGGATGGT
TTTATTGGTAACAATAATCTGGCAGGATCAGATATAAGGGCTTGA
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Coding sequence (CDS) from alignment at An14:18985..19879+

>CBS51388_008552-T1 ID=CBS51388_008552-T1|Name=CBS51388_008552-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2340bp|location=Sequence derived from alignment at An14:18985..19879+ (Aspergillus niger CBS 513.88)
ATGGATCAGGATGATACATTGTTCGATTATGATGCCGGCTTAGAGGGCAC
ATTGCAAGATATAGCTGTGGATCCCAAGAGGGATGAACCTATTGCTGCAC
CAGTATTAGGTCTGGATGAAAAGGTCACAATCACTAAGCAGCGACGATTT
ACAGTCAAGTTGGATGAGAGCCGGTTACTGTCACACGCCGGAATACCAAA
ACTGCGTTCTACAGCGAAGTCGAAACTGAAATTCAAAGGCAAAGGGCATG
AGTTTTCGGATGCCGCTCGACTCTTAAATTTTTATCAACTATGGCTCGAT
GATTTGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTATGATAGAGAA
ACTGGGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAATGGATAGACG
AGGAAAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGCGCAACAAGCG
AAATCTTCGAGCCCACATACCCGTGACAATAGTATGCCTATTGGGCATCT
TGAAAAAGCCAACGCTATCATAGGCCGAGGAGATAACGTGGCACAGGCGC
CCCCAACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCTAGGAGGCATT
CTACAACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTGTTCCAAGGGA
AATCATAGAAGAAGGTGCTCATGAAAATAATGATGATGATGATGATGATG
AGCTGGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTATTGGTAACAAT
AATCTGGCAGGATCAGATATAAGGGCTTGAATGGATCAGGATGATACATT
GTTCGATTATGATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTGTGG
ATCCCAAGAGGGATGAACCTATTGCTGCACCAGTATTAGGTCTGGATGAA
AAGGTCACAATCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGAGAG
CCGGTTACTGTCACACGCCGGAATACCAAAACTGCGTTCTACAGCGAAGT
CGAAACTGAAATTCAAAGGCAAAGGGCATGAGTTTTCGGATGCCGCTCGA
CTCTTAAATTTTTATCAACTATGGCTCGATGATTTGTTCCCTCGTGCGAA
GTTCGCCGATGGATTGGCTATGATAGAGAAACTGGGTCACTCGAAACGCT
TGCAGACGATGCGAAGAGAATGGATAGACGAGGAAAAGCCGAGACTTTCC
GCAGCTGACTCTGAAGATGCGCAACAAGCGAAATCTTCGAGCCCACATAC
CCGTGACAATAGTATGCCTATTGGGCATCTTGAAAAAGCCAACGCTATCA
TAGGCCGAGGAGATAACGTGGCACAGGCGCCCCCAACACAGGGCCTTGGA
GAGCCATCTTCACTTCTGCTAGGAGGCATTCTACAACAGGAGGATTTGTT
TGTGTCTGATGATGAAAGTGTTCCAAGGGAAATCATAGAAGAAGGTGCTC
ATGAAAATAATGATGATGATGATGATGATGAGCTGGAAGCACTTCTTCGG
GAGCACGAGGATGGTTTTATTGGTAACAATAATCTGGCAGGATCAGATAT
AAGGGCTTGAATGGATCAGGATGATACATTGTTCGATTATGATGCCGGCT
TAGAGGGCACATTGCAAGATATAGCTGTGGATCCCAAGAGGGATGAACCT
ATTGCTGCACCAGTATTAGGTCTGGATGAAAAGGTCACAATCACTAAGCA
GCGACGATTTACAGTCAAGTTGGATGAGAGCCGGTTACTGTCACACGCCG
GAATACCAAAACTGCGTTCTACAGCGAAGTCGAAACTGAAATTCAAAGGC
AAAGGGCATGAGTTTTCGGATGCCGCTCGACTCTTAAATTTTTATCAACT
ATGGCTCGATGATTTGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTA
TGATAGAGAAACTGGGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAA
TGGATAGACGAGGAAAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGC
GCAACAAGCGAAATCTTCGAGCCCACATACCCGTGACAATAGTATGCCTA
TTGGGCATCTTGAAAAAGCCAACGCTATCATAGGCCGAGGAGATAACGTG
GCACAGGCGCCCCCAACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCT
AGGAGGCATTCTACAACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTG
TTCCAAGGGAAATCATAGAAGAAGGTGCTCATGAAAATAATGATGATGAT
GATGATGATGAGCTGGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTAT
TGGTAACAATAATCTGGCAGGATCAGATATAAGGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0048478replication fork protection
GO:0006974cellular response to DNA damage stimulus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008552CBS51388_008552Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008552-T1.exon1CBS51388_008552-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008552-T1.exon2CBS51388_008552-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008552-T1.exon3CBS51388_008552-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008552-T1.cdsCBS51388_008552-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008552-T1CBS51388_008552-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012923
DBxrefPFAM:PF07962
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:18985..19879 +
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