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CBS51388_008685-T1, CBS51388_008685-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008685-T1
Unique NameCBS51388_008685-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:392827..394512-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008685-T1 ID=CBS51388_008685-T1|Name=CBS51388_008685-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1686bp|location=Sequence derived from alignment at An14:392827..394512- (Aspergillus niger CBS 513.88)
ATGCCGCCTAGTAGACGGCCGCGTACCGACCCCATCGTCCGCGTCCGCAC
CGGTTGCTGGGCCTGCAGACGCCGCAAGAAGAAATGTGATGAAGCCAAAC
CAGTCTGTGGGGGATGCGTGCGAAATAAGCTCACTTGCCAGTGGCCGACC
ATCATCCCGGGCCAACCCAAGGCCAACAATATCTCCTTCATGCCTGAAGA
TGATGATCAGCAAAATCGTCCAGGTGGCGAAGAGGGCCCCTCTCGCCAGA
TGAGCGTGAACCGGGAAACGTCCAGCTCGATCGAGTCCCGTTCTACATCC
CCTTCTTCCCCAGAGGAGATACTACGGGAGTCGGAATCTCCAGAAGACAC
GTCTCGCGCGTCTTCTGCACCATGTCCCTCGATTTCGATGGATCTTGCTC
AGATTCCTGCCATCGGCAGCAGTCAAGTCCTAGGAACGTCTGCCACCGTT
AGCAATCTACTCCCCCGGAGCTTGTCCATGTTCCCAGGCCATGGGCCTGA
CTCTTATGAGCTGTTGAGCCACTATTTGGCAACAACAGCCGACTGCATGG
CGAACGGGTCTACCCCTATCAATCCATTCTTGGTTCAAATCGTGCCACTC
GCTTTCAGCAGCGATCTTCTGCTTCAGCTGGTTCTGACGCAGAGTGCTGC
TCACCGGGCGTTTCGCTGTCACATGGAGTCTGACGAGGTCGCTCAGAGAC
ACTACACGTCAGCCCTACAACTATTCCGAAAAGGAGTCACCGAATTTATT
GACGGGAAAGAGTCAAATCCGCTCATGCTTACGGTAGGAGCGTTGGTGAT
GTGCTTTACTGAGGTACGCCTACATTCCAAGGACATTGAACATGGCTGAT
TATAGCAGACGGCCAAAGGCGATATGAACGGCACGATATTCGACCACCTG
ACTGCTGCTAATTCTCTTTTGATTCGACTGCTCTCACAAAGCGATACAGC
GGTACCGAAAGACTTGAAAGACTTTGTTATCGAATACTACACCTACACTG
CTGCCGTGAGCATGATCTCGGTCGATGCTCGTGTCAGTACTCAACTATTC
TTGAACTTTGACCTCGAACAACGGGCGCGTCAGCTGCTGCAATCGGAATA
CGTGGGTAATCTATGTGGTTGCTGGCTGGAGTTGTTGCTGCTGATCCCCT
GCATCTTCGACTTAGGTCGGCAGTGGATGATGCACGATGGCCGACCGGCC
ATGCCCACTGCAGATGATATTGCCATGTTCAGCTCGCTGCAAGTGCAAAT
CATGCGATGGACACCGTATGCCTCAGTCAGCCCGGAGGTATTTCTGGCAG
GGCGGATCTTTCAGCAGGCGATGCTCCTTTACCTCTACACCGCGCTAGGC
GGGTTCTCGCGGGCGGAGAACGGCATGTATCAGGGGCTGATCGAGACTGC
GATTGCAGAGGCAATGTCTTATCTGGATCAGCTGTCTGGGACTGCGCGGA
TCAACTCGGGTCTCTGTTGGCCGATTGCTGTGGTGGGGTCTTGCTTATCC
AATGCGGAACACCAGGATAGTCTACGCCGCCGGCTCACCGTCATGGTGAA
CACGTTTGGACTCGGCAACATGCAGAGGACTCTACTCATACTGGAACACA
TGTGGCAGATGCCGCTGGACGAAGCAGGTCCATGGAACATCTGTCGAGCC
ATGCAACGGAATCAAATATGGATATCGTTTGCCTAA
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Coding sequence (CDS) from alignment at An14:392827..394512-

>CBS51388_008685-T1 ID=CBS51388_008685-T1|Name=CBS51388_008685-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3282bp|location=Sequence derived from alignment at An14:392827..394512- (Aspergillus niger CBS 513.88)
ACGGCCAAAGGCGATATGAACGGCACGATATTCGACCACCTGACTGCTGC
TAATTCTCTTTTGATTCGACTGCTCTCACAAAGCGATACAGCGGTACCGA
AAGACTTGAAAGACTTTGTTATCGAATACTACACCTACACTGCTGCCGTG
AGCATGATCTCGGTCGATGCTCGTGTCAGTACTCAACTATTCTTGAACTT
TGACCTCGAACAACGGGCGCGTCAGCTGCTGCAATCGGAATACGTGGGTA
ATCTATGTGGTTGCTGGCTGGAGTTGTTGCTGCTGATCCCCTGCATCTTC
GACTTAGGTCGGCAGTGGATGATGCACGATGGCCGACCGGCCATGCCCAC
TGCAGATGATATTGCCATGTTCAGCTCGCTGCAAGTGCAAATCATGCGAT
GGACACCGTATGCCTCAGTCAGCCCGGAGGTATTTCTGGCAGGGCGGATC
TTTCAGCAGGCGATGCTCCTTTACCTCTACACCGCGCTAGGCGGGTTCTC
GCGGGCGGAGAACGGCATGTATCAGGGGCTGATCGAGACTGCGATTGCAG
AGGCAATGTCTTATCTGGATCAGCTGTCTGGGACTGCGCGGATCAACTCG
GGTCTCTGTTGGCCGATTGCTGTGGTGGGGTCTTGCTTATCCAATGCGGA
ACACCAGGATAGTCTACGCCGCCGGCTCACCGTCATGGTGAACACGTTTG
GACTCGGCAACATGCAGAGGACTCTACTCATACTGGAACACATGTGGCAG
ATGCCGCTGGACGAAGCAGGTCCATGGAACATCTGTCGAGCCATGCAACG
GAATCAAATATGGATATCGTTTGCCTAAATGCCGCCTAGTAGACGGCCGC
GTACCGACCCCATCGTCCGCGTCCGCACCGGTTGCTGGGCCTGCAGACGC
CGCAAGAAGAAATGTGATGAAGCCAAACCAGTCTGTGGGGGATGCGTGCG
AAATAAGCTCACTTGCCAGTGGCCGACCATCATCCCGGGCCAACCCAAGG
CCAACAATATCTCCTTCATGCCTGAAGATGATGATCAGCAAAATCGTCCA
GGTGGCGAAGAGGGCCCCTCTCGCCAGATGAGCGTGAACCGGGAAACGTC
CAGCTCGATCGAGTCCCGTTCTACATCCCCTTCTTCCCCAGAGGAGATAC
TACGGGAGTCGGAATCTCCAGAAGACACGTCTCGCGCGTCTTCTGCACCA
TGTCCCTCGATTTCGATGGATCTTGCTCAGATTCCTGCCATCGGCAGCAG
TCAAGTCCTAGGAACGTCTGCCACCGTTAGCAATCTACTCCCCCGGAGCT
TGTCCATGTTCCCAGGCCATGGGCCTGACTCTTATGAGCTGTTGAGCCAC
TATTTGGCAACAACAGCCGACTGCATGGCGAACGGGTCTACCCCTATCAA
TCCATTCTTGGTTCAAATCGTGCCACTCGCTTTCAGCAGCGATCTTCTGC
TTCAGCTGGTTCTGACGCAGAGTGCTGCTCACCGGGCGTTTCGCTGTCAC
ATGGAGTCTGACGAGGTCGCTCAGAGACACTACACGTCAGCCCTACAACT
ATTCCGAAAAGGAGTCACCGAATTTATTGACGGGAAAGAGTCAAATCCGC
TCATGCTTACGGTAGGAGCGTTGGTGATGTGCTTTACTGAGACGGCCAAA
GGCGATATGAACGGCACGATATTCGACCACCTGACTGCTGCTAATTCTCT
TTTGATTCGACTGCTCTCACAAAGCGATACAGCGGTACCGAAAGACTTGA
AAGACTTTGTTATCGAATACTACACCTACACTGCTGCCGTGAGCATGATC
TCGGTCGATGCTCGTGTCAGTACTCAACTATTCTTGAACTTTGACCTCGA
ACAACGGGCGCGTCAGCTGCTGCAATCGGAATACGTGGGTAATCTATGTG
GTTGCTGGCTGGAGTTGTTGCTGCTGATCCCCTGCATCTTCGACTTAGGT
CGGCAGTGGATGATGCACGATGGCCGACCGGCCATGCCCACTGCAGATGA
TATTGCCATGTTCAGCTCGCTGCAAGTGCAAATCATGCGATGGACACCGT
ATGCCTCAGTCAGCCCGGAGGTATTTCTGGCAGGGCGGATCTTTCAGCAG
GCGATGCTCCTTTACCTCTACACCGCGCTAGGCGGGTTCTCGCGGGCGGA
GAACGGCATGTATCAGGGGCTGATCGAGACTGCGATTGCAGAGGCAATGT
CTTATCTGGATCAGCTGTCTGGGACTGCGCGGATCAACTCGGGTCTCTGT
TGGCCGATTGCTGTGGTGGGGTCTTGCTTATCCAATGCGGAACACCAGGA
TAGTCTACGCCGCCGGCTCACCGTCATGGTGAACACGTTTGGACTCGGCA
ACATGCAGAGGACTCTACTCATACTGGAACACATGTGGCAGATGCCGCTG
GACGAAGCAGGTCCATGGAACATCTGTCGAGCCATGCAACGGAATCAAAT
ATGGATATCGTTTGCCTAAATGCCGCCTAGTAGACGGCCGCGTACCGACC
CCATCGTCCGCGTCCGCACCGGTTGCTGGGCCTGCAGACGCCGCAAGAAG
AAATGTGATGAAGCCAAACCAGTCTGTGGGGGATGCGTGCGAAATAAGCT
CACTTGCCAGTGGCCGACCATCATCCCGGGCCAACCCAAGGCCAACAATA
TCTCCTTCATGCCTGAAGATGATGATCAGCAAAATCGTCCAGGTGGCGAA
GAGGGCCCCTCTCGCCAGATGAGCGTGAACCGGGAAACGTCCAGCTCGAT
CGAGTCCCGTTCTACATCCCCTTCTTCCCCAGAGGAGATACTACGGGAGT
CGGAATCTCCAGAAGACACGTCTCGCGCGTCTTCTGCACCATGTCCCTCG
ATTTCGATGGATCTTGCTCAGATTCCTGCCATCGGCAGCAGTCAAGTCCT
AGGAACGTCTGCCACCGTTAGCAATCTACTCCCCCGGAGCTTGTCCATGT
TCCCAGGCCATGGGCCTGACTCTTATGAGCTGTTGAGCCACTATTTGGCA
ACAACAGCCGACTGCATGGCGAACGGGTCTACCCCTATCAATCCATTCTT
GGTTCAAATCGTGCCACTCGCTTTCAGCAGCGATCTTCTGCTTCAGCTGG
TTCTGACGCAGAGTGCTGCTCACCGGGCGTTTCGCTGTCACATGGAGTCT
GACGAGGTCGCTCAGAGACACTACACGTCAGCCCTACAACTATTCCGAAA
AGGAGTCACCGAATTTATTGACGGGAAAGAGTCAAATCCGCTCATGCTTA
CGGTAGGAGCGTTGGTGATGTGCTTTACTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008685CBS51388_008685Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008685-T1CBS51388_008685-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008685-T1.cdsCBS51388_008685-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008685-T1.exon2CBS51388_008685-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008685-T1.exon1CBS51388_008685-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:392827..394512 -
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