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CBS51388_008893-T1, CBS51388_008893-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008893-T1
Unique NameCBS51388_008893-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:976156..977037-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008893-T1 ID=CBS51388_008893-T1|Name=CBS51388_008893-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=882bp|location=Sequence derived from alignment at An14:976156..977037- (Aspergillus niger CBS 513.88)
ATGTCGGTCACCGAAGACGCCAAAGTTGATCCCATGTCGCCCACCTCCGA
CCCCAACCTGACTTCGCAATCCACAACCATTGCCGTGCCATCATCAGAAA
GTCAGGAGCTTCCTAGTGCCGCCCCTCATCCCGATAACGCCCAGGCCGAG
AGCCAAGAGCCCAGTTCGGTGGATGCGAAACCCACAGAGAATAATGAGGA
TAATACGTCAGCTCCCGTCCTCAAGCAGGACCCAGTAGATGCTGCTCCAT
CTGCAAGCGCATCTCCTCAACAACACGATGAGGCGAAGGCTCCGGCAGCT
GGCTCCGAGCCATCGTCCCAGGGTTCAGATGAGGCTGCTAAAGAAGAGGA
GGACACGGGCCCATCCTTGGTGATCACCCTGCTCTTGATAACCGGATCCC
GACACCCGTTCAAGATCGATGGGAAATACCTGCGGAAACGGTCGGTCAAT
GTAGAGAATTACGATCCATTCGCCATGAGCGTATACACGTTGAAGGAATT
GATTTGGCGGGAATGGCGGCAAGGTATGCGTGCAATAGCCAGGATGGTCT
CGGAACTTGCGGGTGGCTAACATATGATTCCTGGCAGACTGGGAGCCGCG
CCCATCATCACCCAGCTCCATCCGACTCATCTCATTCGGCAAGCTGCTCG
ATGACAAAGCCCCGTTATCAGGTATTTATCACTTCTACCACTGATTTGGG
TGCTGATGCTGATCAACTATCATCCAGACTCCAAGTTCAGCCGGGATGCT
CCCAACGTGGTCCACATGACTGTGAAGCCCCAGGAGATCGTTGACGAAGA
AGACGCCAAGTCCAAACCCCAGTACACCCGGGAGCGGGAGTCCAGTGAGC
GTAGCCCTGGCTGTCGCTGCATCATTCAATAA
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Coding sequence (CDS) from alignment at An14:976156..977037-

>CBS51388_008893-T1 ID=CBS51388_008893-T1|Name=CBS51388_008893-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2286bp|location=Sequence derived from alignment at An14:976156..977037- (Aspergillus niger CBS 513.88)
ACTCCAAGTTCAGCCGGGATGCTCCCAACGTGGTCCACATGACTGTGAAG
CCCCAGGAGATCGTTGACGAAGAAGACGCCAAGTCCAAACCCCAGTACAC
CCGGGAGCGGGAGTCCAGTGAGCGTAGCCCTGGCTGTCGCTGCATCATTC
AATAAACTGGGAGCCGCGCCCATCATCACCCAGCTCCATCCGACTCATCT
CATTCGGCAAGCTGCTCGATGACAAAGCCCCGTTATCAGATGTCGGTCAC
CGAAGACGCCAAAGTTGATCCCATGTCGCCCACCTCCGACCCCAACCTGA
CTTCGCAATCCACAACCATTGCCGTGCCATCATCAGAAAGTCAGGAGCTT
CCTAGTGCCGCCCCTCATCCCGATAACGCCCAGGCCGAGAGCCAAGAGCC
CAGTTCGGTGGATGCGAAACCCACAGAGAATAATGAGGATAATACGTCAG
CTCCCGTCCTCAAGCAGGACCCAGTAGATGCTGCTCCATCTGCAAGCGCA
TCTCCTCAACAACACGATGAGGCGAAGGCTCCGGCAGCTGGCTCCGAGCC
ATCGTCCCAGGGTTCAGATGAGGCTGCTAAAGAAGAGGAGGACACGGGCC
CATCCTTGGTGATCACCCTGCTCTTGATAACCGGATCCCGACACCCGTTC
AAGATCGATGGGAAATACCTGCGGAAACGGTCGGTCAATGTAGAGAATTA
CGATCCATTCGCCATGAGCGTATACACGTTGAAGGAATTGATTTGGCGGG
AATGGCGGCAAGACTCCAAGTTCAGCCGGGATGCTCCCAACGTGGTCCAC
ATGACTGTGAAGCCCCAGGAGATCGTTGACGAAGAAGACGCCAAGTCCAA
ACCCCAGTACACCCGGGAGCGGGAGTCCAGTGAGCGTAGCCCTGGCTGTC
GCTGCATCATTCAATAAACTGGGAGCCGCGCCCATCATCACCCAGCTCCA
TCCGACTCATCTCATTCGGCAAGCTGCTCGATGACAAAGCCCCGTTATCA
GATGTCGGTCACCGAAGACGCCAAAGTTGATCCCATGTCGCCCACCTCCG
ACCCCAACCTGACTTCGCAATCCACAACCATTGCCGTGCCATCATCAGAA
AGTCAGGAGCTTCCTAGTGCCGCCCCTCATCCCGATAACGCCCAGGCCGA
GAGCCAAGAGCCCAGTTCGGTGGATGCGAAACCCACAGAGAATAATGAGG
ATAATACGTCAGCTCCCGTCCTCAAGCAGGACCCAGTAGATGCTGCTCCA
TCTGCAAGCGCATCTCCTCAACAACACGATGAGGCGAAGGCTCCGGCAGC
TGGCTCCGAGCCATCGTCCCAGGGTTCAGATGAGGCTGCTAAAGAAGAGG
AGGACACGGGCCCATCCTTGGTGATCACCCTGCTCTTGATAACCGGATCC
CGACACCCGTTCAAGATCGATGGGAAATACCTGCGGAAACGGTCGGTCAA
TGTAGAGAATTACGATCCATTCGCCATGAGCGTATACACGTTGAAGGAAT
TGATTTGGCGGGAATGGCGGCAAGACTCCAAGTTCAGCCGGGATGCTCCC
AACGTGGTCCACATGACTGTGAAGCCCCAGGAGATCGTTGACGAAGAAGA
CGCCAAGTCCAAACCCCAGTACACCCGGGAGCGGGAGTCCAGTGAGCGTA
GCCCTGGCTGTCGCTGCATCATTCAATAAACTGGGAGCCGCGCCCATCAT
CACCCAGCTCCATCCGACTCATCTCATTCGGCAAGCTGCTCGATGACAAA
GCCCCGTTATCAGATGTCGGTCACCGAAGACGCCAAAGTTGATCCCATGT
CGCCCACCTCCGACCCCAACCTGACTTCGCAATCCACAACCATTGCCGTG
CCATCATCAGAAAGTCAGGAGCTTCCTAGTGCCGCCCCTCATCCCGATAA
CGCCCAGGCCGAGAGCCAAGAGCCCAGTTCGGTGGATGCGAAACCCACAG
AGAATAATGAGGATAATACGTCAGCTCCCGTCCTCAAGCAGGACCCAGTA
GATGCTGCTCCATCTGCAAGCGCATCTCCTCAACAACACGATGAGGCGAA
GGCTCCGGCAGCTGGCTCCGAGCCATCGTCCCAGGGTTCAGATGAGGCTG
CTAAAGAAGAGGAGGACACGGGCCCATCCTTGGTGATCACCCTGCTCTTG
ATAACCGGATCCCGACACCCGTTCAAGATCGATGGGAAATACCTGCGGAA
ACGGTCGGTCAATGTAGAGAATTACGATCCATTCGCCATGAGCGTATACA
CGTTGAAGGAATTGATTTGGCGGGAATGGCGGCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_008893CBS51388_008893Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008893-T1CBS51388_008893-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008893-T1.cdsCBS51388_008893-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008893-T1.exon3CBS51388_008893-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_008893-T1.exon2CBS51388_008893-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008893-T1.exon1CBS51388_008893-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR039540
DBxrefPFAM:PF13881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:976156..977037 -
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