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CBS51388_008909-T1, CBS51388_008909-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_008909-T1
Unique NameCBS51388_008909-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An14:1019266..1020390+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_008909-T1 ID=CBS51388_008909-T1|Name=CBS51388_008909-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1125bp|location=Sequence derived from alignment at An14:1019266..1020390+ (Aspergillus niger CBS 513.88)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG AAGAAGGCCGGTATGCTGTTCTTTCTTGCCCCTTTCCGCTATCTTCCCCG CGTCCAGCAGAATTTTGCTAACATGGGCCATTTTTTCTTCTTCCCCACGA TTTAGCCTACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCCACCAAGGGTTCCATTACCTCCGTCCAGGCCGTCTACG TCCCTGCTGACGATTTGACTGACCCTGCCCCCGCCACCACCTTCGCTCAC TTGGACGCCACCACTGTCTTGTCCCGTGGTATCTCCGAGTTGGGTATCTA CCCTGCCGTCGACCCTCTCGACTCCAAGTCCCGTATGCTCGACACCCGTA TCGTCGGTGAAGACCACTACAACACCGCCACCCGTGTCCAGCAGATGCTC CAGGAGTACAAGTCCCTCCAGGATATCATTGCCATTCTGGGTATGGACGA ACTGTCTGAGGCTGACAAGCTTACCGTCGAGCGTGCTCGTAAGCTCCAGC GTTTCCTGTCCCAGCCCTTCACCGTCGCCCAGGTCTTCACTGGTATCGAG GGTAAGCTGGTCGACCTGAAGGACACCATCCGCAGTTTCAAGGCCATCAT CAACGGTGAAGGTGACGACCTTCCTGAGGGTAAGTTGATCTCTCCACTTT CTGTTTGGTGATCGGCATGGATGCTAATTTGTTTATCTACAGCTGCTTTC TACATGGTTGGTGACTTCGAGTCTGCCCGCGCCAAGGGTGAGAAGATCTT GGCCGAGCTCGAGAACAAGGCCTAA
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Coding sequence (CDS) from alignment at An14:1019266..1020390+

>CBS51388_008909-T1 ID=CBS51388_008909-T1|Name=CBS51388_008909-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2619bp|location=Sequence derived from alignment at An14:1019266..1020390+ (Aspergillus niger CBS 513.88)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGGTATGCTGTTCTTTCTTGCCCCTTTCCGCTATCTTCCCCG
CGCCGTCTACGTCCCTGCTGACGATTTGACTGACCCTGCCCCCGCCACCA
CCTTCGCTCACTTGGACGCCACCACTGTCTTGTCCCGTGGTATCTCCGAG
TTGGGTATCTACCCTGCCGTCGACCCTCTCGACTCCAAGTCCCGTATGCT
CGACACCCGTATCGTCGGTGAAGACCACTACAACACCGCCACCCGTGTCC
AGCAGATGCTCCAGGAGTACAAGTCCCTCCAGGATATCATTGCCATTCTG
GGTATGGACGAACTGTCTGAGGCTGACAAGCTTACCGTCGAGCGTGCTCG
TAAGCTCCAGCGTTTCCTGTCCCAGCCCTTCACCGTCGCCCAGGTCTTCA
CTGGTATCGAGGGTAAGCTGGTCGACCTGAAGGACACCATCCGCAGTTTC
AAGGCCATCATCAACGGTGAAGGTGACGACCTTCCTGAGGCTGCTTTCTA
CATGGTTGGTGACTTCGAGTCTGCCCGCGCCAAGGGTGAGAAGATCTTGG
CCGAGCTCGAGAACAAGGCCTAAATGTTCCTTCGTTCCGTTACTCGCGCT
GCTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCTGCGCTCCTACCGCAC
CGTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTCCTCAGACTGAGAAGA
AGTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCCGAGCATGCCATCTCG
AATCCCACACTCGCCGGTATTGAGAAGCGCTGGGAGGCCATGCCCCCTCA
GGAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACCGCATGAAGGTCGACT
GGCACCAGATGACTCTCCAGGAGAAGAAGGCCGGTATGCTGTTCTTTCTT
GCCCCTTTCCGCTATCTTCCCCGCGCCGTCTACGTCCCTGCTGACGATTT
GACTGACCCTGCCCCCGCCACCACCTTCGCTCACTTGGACGCCACCACTG
TCTTGTCCCGTGGTATCTCCGAGTTGGGTATCTACCCTGCCGTCGACCCT
CTCGACTCCAAGTCCCGTATGCTCGACACCCGTATCGTCGGTGAAGACCA
CTACAACACCGCCACCCGTGTCCAGCAGATGCTCCAGGAGTACAAGTCCC
TCCAGGATATCATTGCCATTCTGGGTATGGACGAACTGTCTGAGGCTGAC
AAGCTTACCGTCGAGCGTGCTCGTAAGCTCCAGCGTTTCCTGTCCCAGCC
CTTCACCGTCGCCCAGGTCTTCACTGGTATCGAGGGTAAGCTGGTCGACC
TGAAGGACACCATCCGCAGTTTCAAGGCCATCATCAACGGTGAAGGTGAC
GACCTTCCTGAGGCTGCTTTCTACATGGTTGGTGACTTCGAGTCTGCCCG
CGCCAAGGGTGAGAAGATCTTGGCCGAGCTCGAGAACAAGGCCTAAATGT
TCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACC
ACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAA
CGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCG
CCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAG
CGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCT
GAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGA
AGGCCGGTATGCTGTTCTTTCTTGCCCCTTTCCGCTATCTTCCCCGCGCC
GTCTACGTCCCTGCTGACGATTTGACTGACCCTGCCCCCGCCACCACCTT
CGCTCACTTGGACGCCACCACTGTCTTGTCCCGTGGTATCTCCGAGTTGG
GTATCTACCCTGCCGTCGACCCTCTCGACTCCAAGTCCCGTATGCTCGAC
ACCCGTATCGTCGGTGAAGACCACTACAACACCGCCACCCGTGTCCAGCA
GATGCTCCAGGAGTACAAGTCCCTCCAGGATATCATTGCCATTCTGGGTA
TGGACGAACTGTCTGAGGCTGACAAGCTTACCGTCGAGCGTGCTCGTAAG
CTCCAGCGTTTCCTGTCCCAGCCCTTCACCGTCGCCCAGGTCTTCACTGG
TATCGAGGGTAAGCTGGTCGACCTGAAGGACACCATCCGCAGTTTCAAGG
CCATCATCAACGGTGAAGGTGACGACCTTCCTGAGGCTGCTTTCTACATG
GTTGGTGACTTCGAGTCTGCCCGCGCCAAGGGTGAGAAGATCTTGGCCGA
GCTCGAGAACAAGGCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATP2CBS51388_008909Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008909-T1.exon1CBS51388_008909-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_008909-T1.exon2CBS51388_008909-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_008909-T1.exon3CBS51388_008909-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008909-T1.cdsCBS51388_008909-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_008909-T1CBS51388_008909-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036639
DBxrefInterPro:IPR020003
DBxrefInterPro:IPR024034
DBxrefInterPro:IPR004203
DBxrefInterPro:IPR000194
Product beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase
Productatp2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An14supercontigAn14:1019266..1020390 +