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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:1246059..1248059- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008983-T1 ID=CBS51388_008983-T1|Name=CBS51388_008983-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2001bp|location=Sequence derived from alignment at An14:1246059..1248059- (Aspergillus niger CBS 513.88)
ATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCG
CCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCA
ACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAG
GCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAA
AATCATGGTCAGCGGCTTGGTGAGTACCCGTTATCTCTGCTCTATTGATA
AATGAACCGTTACTAACGTTTTTAGCCTTCCGATGTGAATGAGGCCAATA
TCAAGGTATGTTGATCGAAAGGCCTTGGCCTTGGGTTTCTATCGCCATGT
TTTCTTCTCGAAACCTTCGAGGCGCAACGGCTTTCGCGCGCGTTTCGATC
CTTGCCACGTTATCTATATATATTTTATATCACCGTCATGGATTCTTGGT
CTTCAGCATAGGCAGCAAACTCCATTGAAATCTTCGCATGCGGTAATTGC
ACGCTGGCACCCTGCGAGTCCGCCGAAGTTGGAGTTCTGCCGTAGTCTTG
CGAAAGGCGTGTTAGCTCGGGCGGATCTTCCAGCCATCCGCCTTTGAAGC
CACGCAGCAGACTGTGCCACAGATGATTGTTGAAACATACCATCTTCGAA
ACCAATCCGATTGGCTACACCCGTACAAAGTCCCACGTTTCGAGGTGTCG
GGCATCAGCGAGCGCATCAGCCTACCAGCAGTGACCGACTAGTTCGGCAG
GTGATCAACTGTCAAGCATCATGCTACCGGCGGTCGGTATGGGAAATGTT
TCAGTGTCGGGCAGGAAAGACGCATCTTCCCATATCACCTCCGTGAGACA
AATCGTGTCTTGTTCTCCCTATCATGGGCTGCTAGAGAGGTTCTAGGGAA
ACAGAACCATGGATTTGCCGCACACGTAGTCTTCGTGTTGTCTGTCCCCG
GGCGAAGGTTGCTGGCACACACAGCCCGTAGCTTTTGAGGCTAGCGCCTT
GTCTGGTTGCGAAAAGGTCGATGACGATTGCTGAGTGGGTTAGTTGGAAG
GGGGACACACGATACTGTGAAGGCTTTTGAGGGAGTTCATCGTTGTGGTT
CTTGGGATAAATGCTAGCAGCTCTGTGCTCTAGATATGACAGTGTCTCGG
TGTTCTGGAATGAACCGCCATGCACTGATTACTACTAACCGCCGCTGTGT
GCTCGCTGGTGCTCTTTGGTATCGCGTTTGAAGCCGGTGTCACGCGTTCT
TCGATGTTTTGGCTCTTCGGAATTCCTTGCGCCTTCTGCATTCTGTTGGC
TCGACATACTAATTTGGTCTCCTGGTATAGGAATACTTCACAAAGTCAGC
AGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAAACGGCACGAGCC
GTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCT
GCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACCCATGAAGGTGAG
CTTTTCACTAACCAATCACTATTCTTACGTATGGACACTAACAAATACTA
GATTGAGGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTA
AGCCTCTGGGCGAGCGCGTTGCGTAAGTGTCCTCTTCCATTGTCTTGTAC
TGGGGAATCATGACTAACCGCGATGAAGACAAACCAAGCCCCAACCGAAG
CCCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCG
TGCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGG
AGGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAAT
GCTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCA
GCCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCGTAA
GTTTTGTCAACGAGTTGTTGTGCGAACCAGAGCTAATAAACTATTTAGTA
A back to topCoding sequence (CDS) from alignment at An14:1246059..1248059- >CBS51388_008983-T1 ID=CBS51388_008983-T1|Name=CBS51388_008983-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4536bp|location=Sequence derived from alignment at An14:1246059..1248059- (Aspergillus niger CBS 513.88)
TAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTG
CTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGT
AACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGA
CTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCC
AAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGAC
CTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTCCCACGC
TCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATACTT
CACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAA
ACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACA
GCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACC
CATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTGCCAAGT
TGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGCGCTCGC
CGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCCTGTCCC
AGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCGGAAAGG
CTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATGGTCAGC
GGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGG
CTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGC
CGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGAT
GGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCA
ATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGC
GAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTC
CCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGA
ATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACA
ACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCC
GATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGG
CAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTG
CCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGC
GCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCC
TGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCG
GAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATG
GTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTA
CCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCT
AACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGC
TGAGATGGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGG
AGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACC
GGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGA
CGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCG
TTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCA
CCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGC
AAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGT
TGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGA
TGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGC
CAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAA
CGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGG
CGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAA
ATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGCCCGCTA
CCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGT
CGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCT
TGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCC
CTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCC
GCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGT
CGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCG
AGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCA
TGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTG
TTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACT
CCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATA
TCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGC
CGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGC
TGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTG
CCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAG
AGCAAAATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAACCGAAGC
CCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGT
GCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGA
GGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAATG
CTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAG
CCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCATTGA
GGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTC
TGGGCGAGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGC
GAGTCATGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATCGCCTCG
ATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAA
TGGACTCCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGAATGAGG
CCAATATCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTC
GTCAGCCGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAA
CAAGGCTGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCA
AGGCTGCCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCT
ACGGAGAGCAAAATCATGGTCAGCGGCTTGTAAACAAACCAAGCCCCAAC
CGAAGCCCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAG
GGCCGTGCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGAC
TGTGGAGGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACG
AGAATGCTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCC
CAGCAGCCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTC
CATTGAGGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTA
AGCCTCTGGGCGAGCGCGTTGCGAATACTTCACAAAGTCAGCAGGTCCTG
TCAAGCGAGTCATGCTCACCTACAACCAAAACGGCACGAGCCGTGGTATC
GCCTCGATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCTGCTAAGGA
CTTGAATGGACTCCTTGTTGATGGCAGACCCATGAAGCCTTCCGATGTGA
ATGAGGCCAATATCAAGATGTCTGCCAAGTTGGACAAGTCTCTCGACGAG
ATCCTCGTCAGCCGTCGCCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGC
TCCCAACAAGGCTGCCAACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGA
CCACCAAGGCTGCCAAGGCGCCCGGAAAGGCTGTTCAGAATGGACACCCG
GTCTCTACGGAGAGCAAAATCATGGTCAGCGGCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR025715 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF13865 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:1246059..1248059 - |
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