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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:177395..178595- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009216-T1 ID=CBS51388_009216-T1|Name=CBS51388_009216-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1201bp|location=Sequence derived from alignment at An15:177395..178595- (Aspergillus niger CBS 513.88)
ATGCGACGTGGACTTCTCATTTTCCTCATCGCAAATCTCATTATCGTCAC
ATTCCTCGTGCGAAGCGTCTTTACACTTCTTTCCCTACTGGTGGAAGATG
CTTCCGCCGACGCTATCCACCGCGCCGAGCTCCCCTCGCCAAACTCCAGT
TTGATTGAACAACGCCCTCAGATCATTCCCAAGATCATCCACCAGACATA
CAAGAACGAAACGATCCCGGAAGTATGGAGGGAAGCCCAACAGAGCTGCA
TTGATCTGCACCCAGACTACGAATACATTGTATGTTCAGCCTTGTCGATG
TACATTTCGTTCACATGAACTTTTTTTGCTAACACGCATCTCAATCAGCT
CTGGACCAACGAAAAGTCGCGCGAATTCATCGCCAACGAGTACCCCTGGT
TCCTCGAGACGTTCGATGGCTACAAGTATCCCATTCAGCGTGCTGATTCG
ATCCGCTACTTTGTCCTGGCACACTACGGTGGCACCTACATTGATCTGGA
TGATGTGTGTATAGCCTTTATTTCATTGATTGAGACTATGTCTGACTGGA
TCTTAGGGATGCAATCGCCGGTTAGATCCTCTTCTTGCCTACCCTGCCTG
GGTCCGTCGCACTGTTCCCACCGGTATCTCCAATGATGCCATGGGATCTG
TTCCCCAGCACCCCTTCTTCCTGCGTACGATCGAGCTGCTGCAGTCGTAT
GACCGCCATTGGCTCCTCCCGTACATCACGGTCATGTACTCGACTGGTCC
CCTGTTTTTGTCGGTGATCTGGAAGGAGTACATGCAGACCAATCCCAGCG
AGTCAGGCCGTGTCCGCATCTTGATGCGCGATGAGTACAACAGGTACTCG
TGGAGCTTTTTCACGCACCACGTGGGCAACAGCTGGCACGGAAAAGACGC
CCGCTTGATCTTCTGGATGGGCCAGCACTGGGTGTTCCTCACCGTCTGCG
GTTTCTTCCTGGCTGCCGTCGTTGGCTTCGCGCTCTGGTGGCTGTACGCG
CGCATCATGCTGTTGGGATCCAAGTACCGTTACCGCTACTCGAAGATCCC
TTCCTTTGTTTCGGCTTCCCGCCTGTCTTCGCCGACAAGGATGGGGCGGC
GCATGATGCCTACCCTCCTTCGTCGCGTCAGCTTCAAAGAAGACGAGGAG
GCCGCCGGCGTTACCGAAACGTCGTACGAACTCTATAGCCGACGCGATTA
A back to topCoding sequence (CDS) from alignment at An15:177395..178595- >CBS51388_009216-T1 ID=CBS51388_009216-T1|Name=CBS51388_009216-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3240bp|location=Sequence derived from alignment at An15:177395..178595- (Aspergillus niger CBS 513.88)
GGATGCAATCGCCGGTTAGATCCTCTTCTTGCCTACCCTGCCTGGGTCCG
TCGCACTGTTCCCACCGGTATCTCCAATGATGCCATGGGATCTGTTCCCC
AGCACCCCTTCTTCCTGCGTACGATCGAGCTGCTGCAGTCGTATGACCGC
CATTGGCTCCTCCCGTACATCACGGTCATGTACTCGACTGGTCCCCTGTT
TTTGTCGGTGATCTGGAAGGAGTACATGCAGACCAATCCCAGCGAGTCAG
GCCGTGTCCGCATCTTGATGCGCGATGAGTACAACAGGTACTCGTGGAGC
TTTTTCACGCACCACGTGGGCAACAGCTGGCACGGAAAAGACGCCCGCTT
GATCTTCTGGATGGGCCAGCACTGGGTGTTCCTCACCGTCTGCGGTTTCT
TCCTGGCTGCCGTCGTTGGCTTCGCGCTCTGGTGGCTGTACGCGCGCATC
ATGCTGTTGGGATCCAAGTACCGTTACCGCTACTCGAAGATCCCTTCCTT
TGTTTCGGCTTCCCGCCTGTCTTCGCCGACAAGGATGGGGCGGCGCATGA
TGCCTACCCTCCTTCGTCGCGTCAGCTTCAAAGAAGACGAGGAGGCCGCC
GGCGTTACCGAAACGTCGTACGAACTCTATAGCCGACGCGATTAACTCTG
GACCAACGAAAAGTCGCGCGAATTCATCGCCAACGAGTACCCCTGGTTCC
TCGAGACGTTCGATGGCTACAAGTATCCCATTCAGCGTGCTGATTCGATC
CGCTACTTTGTCCTGGCACACTACGGTGGCACCTACATTGATCTGGATGA
TATGCGACGTGGACTTCTCATTTTCCTCATCGCAAATCTCATTATCGTCA
CATTCCTCGTGCGAAGCGTCTTTACACTTCTTTCCCTACTGGTGGAAGAT
GCTTCCGCCGACGCTATCCACCGCGCCGAGCTCCCCTCGCCAAACTCCAG
TTTGATTGAACAACGCCCTCAGATCATTCCCAAGATCATCCACCAGACAT
ACAAGAACGAAACGATCCCGGAAGTATGGAGGGAAGCCCAACAGAGCTGC
ATTGATCTGCACCCAGACTACGAATACATTGGATGCAATCGCCGGTTAGA
TCCTCTTCTTGCCTACCCTGCCTGGGTCCGTCGCACTGTTCCCACCGGTA
TCTCCAATGATGCCATGGGATCTGTTCCCCAGCACCCCTTCTTCCTGCGT
ACGATCGAGCTGCTGCAGTCGTATGACCGCCATTGGCTCCTCCCGTACAT
CACGGTCATGTACTCGACTGGTCCCCTGTTTTTGTCGGTGATCTGGAAGG
AGTACATGCAGACCAATCCCAGCGAGTCAGGCCGTGTCCGCATCTTGATG
CGCGATGAGTACAACAGGTACTCGTGGAGCTTTTTCACGCACCACGTGGG
CAACAGCTGGCACGGAAAAGACGCCCGCTTGATCTTCTGGATGGGCCAGC
ACTGGGTGTTCCTCACCGTCTGCGGTTTCTTCCTGGCTGCCGTCGTTGGC
TTCGCGCTCTGGTGGCTGTACGCGCGCATCATGCTGTTGGGATCCAAGTA
CCGTTACCGCTACTCGAAGATCCCTTCCTTTGTTTCGGCTTCCCGCCTGT
CTTCGCCGACAAGGATGGGGCGGCGCATGATGCCTACCCTCCTTCGTCGC
GTCAGCTTCAAAGAAGACGAGGAGGCCGCCGGCGTTACCGAAACGTCGTA
CGAACTCTATAGCCGACGCGATTAACTCTGGACCAACGAAAAGTCGCGCG
AATTCATCGCCAACGAGTACCCCTGGTTCCTCGAGACGTTCGATGGCTAC
AAGTATCCCATTCAGCGTGCTGATTCGATCCGCTACTTTGTCCTGGCACA
CTACGGTGGCACCTACATTGATCTGGATGATATGCGACGTGGACTTCTCA
TTTTCCTCATCGCAAATCTCATTATCGTCACATTCCTCGTGCGAAGCGTC
TTTACACTTCTTTCCCTACTGGTGGAAGATGCTTCCGCCGACGCTATCCA
CCGCGCCGAGCTCCCCTCGCCAAACTCCAGTTTGATTGAACAACGCCCTC
AGATCATTCCCAAGATCATCCACCAGACATACAAGAACGAAACGATCCCG
GAAGTATGGAGGGAAGCCCAACAGAGCTGCATTGATCTGCACCCAGACTA
CGAATACATTGGATGCAATCGCCGGTTAGATCCTCTTCTTGCCTACCCTG
CCTGGGTCCGTCGCACTGTTCCCACCGGTATCTCCAATGATGCCATGGGA
TCTGTTCCCCAGCACCCCTTCTTCCTGCGTACGATCGAGCTGCTGCAGTC
GTATGACCGCCATTGGCTCCTCCCGTACATCACGGTCATGTACTCGACTG
GTCCCCTGTTTTTGTCGGTGATCTGGAAGGAGTACATGCAGACCAATCCC
AGCGAGTCAGGCCGTGTCCGCATCTTGATGCGCGATGAGTACAACAGGTA
CTCGTGGAGCTTTTTCACGCACCACGTGGGCAACAGCTGGCACGGAAAAG
ACGCCCGCTTGATCTTCTGGATGGGCCAGCACTGGGTGTTCCTCACCGTC
TGCGGTTTCTTCCTGGCTGCCGTCGTTGGCTTCGCGCTCTGGTGGCTGTA
CGCGCGCATCATGCTGTTGGGATCCAAGTACCGTTACCGCTACTCGAAGA
TCCCTTCCTTTGTTTCGGCTTCCCGCCTGTCTTCGCCGACAAGGATGGGG
CGGCGCATGATGCCTACCCTCCTTCGTCGCGTCAGCTTCAAAGAAGACGA
GGAGGCCGCCGGCGTTACCGAAACGTCGTACGAACTCTATAGCCGACGCG
ATTAACTCTGGACCAACGAAAAGTCGCGCGAATTCATCGCCAACGAGTAC
CCCTGGTTCCTCGAGACGTTCGATGGCTACAAGTATCCCATTCAGCGTGC
TGATTCGATCCGCTACTTTGTCCTGGCACACTACGGTGGCACCTACATTG
ATCTGGATGATATGCGACGTGGACTTCTCATTTTCCTCATCGCAAATCTC
ATTATCGTCACATTCCTCGTGCGAAGCGTCTTTACACTTCTTTCCCTACT
GGTGGAAGATGCTTCCGCCGACGCTATCCACCGCGCCGAGCTCCCCTCGC
CAAACTCCAGTTTGATTGAACAACGCCCTCAGATCATTCCCAAGATCATC
CACCAGACATACAAGAACGAAACGATCCCGGAAGTATGGAGGGAAGCCCA
ACAGAGCTGCATTGATCTGCACCCAGACTACGAATACATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT32 |
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR007577 |
| DBxref | PFAM:PF04488 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:177395..178595 - |
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