|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:255833..256827+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009241-T1 ID=CBS51388_009241-T1|Name=CBS51388_009241-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=995bp|location=Sequence derived from alignment at An15:255833..256827+ (Aspergillus niger CBS 513.88)
ATGACAGTGAAGACCAACGTGCAGGATATCGAGCAAGAGATCGTGGATCT
CGAGGACCGTCTGCGCAATGCACGTGCTCGTCTAGCGTCGGCCTCTGCGT
CGCACAAGGGCGGGGGTTCATATCTACCGGTACCGGAGGGTGTGTTTGCC
CCCCGGACGTCTTCCCCGTACACCTCCTTCTTCCGCCCCCTATCTACAAG
ATACTAACCGTCAATTCCTACGCTCCAGATGCTACAGGAATAGTGCCTAG
CCATGCGCTGCTCCTCCTGTCGGATTCAGCCCTTCCCTTGGGCTCGTTCG
CCTACTCCAGCGGTCTCGAGTCGTATTTGGCGCACAACAAACCCCTTCCT
CGCTCGGTGACGCCGATTGCATCCTTCCAGCGCTTCCTGAAGCTCTCGAT
CGCTTCAATGGCAAGTACCTCACTTCCATACGTTCTGGCAGGATACAGAC
GCCCAGAAGACTTGGAGACCCTGGACAATGACCTCGATGCGTCCACCCCC
TGCATAGTTGCCCAGCGGGCGAGTCTCGCCCAAGGGCGGGCATTGCTCGG
GGTCTGGGAGCGCGCTTTCCGGAAAACGTATGCGTTCAACCCATTCCACG
CTAACCCCAACACTGCCGAGGCTGTGAAGGTGGTTGAGGAATTCTCCGAG
ATATTGAAGTCCTCGTTGGGTACTGATGAACTAGGGCCCAAAGGTCACTT
TGCGCCATTATGGGGGGTGGTGTGTCTGGCCATGGGCATGGACGCCCACC
AGACTGCCTATGTCTTTATGTTGAACCATGCAAAGGCAGTCCTTAGCGCT
GCTGTCCGTGCGTCCGTCATGGGCCCGTATCAGGCCCAGAACATTCTGGC
CAGCAAGGGCCTACAAAACATGATCACTCAACGCATAGAACGGGAGTGGG
ATACTCCCGTCGAAGATGCAGGACAAATCGTCCCACCCCTCGATCTTTGG
GTGGGACGACATGAACTTCTATATAGTAGAATCTTTAACTCATAA back to topCoding sequence (CDS) from alignment at An15:255833..256827+ >CBS51388_009241-T1 ID=CBS51388_009241-T1|Name=CBS51388_009241-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1794bp|location=Sequence derived from alignment at An15:255833..256827+ (Aspergillus niger CBS 513.88)
ATGACAGTGAAGACCAACGTGCAGGATATCGAGCAAGAGATCGTGGATCT
CGAGGACCGTCTGCGCAATGCACGTGCTCGTCTAGCGTCGGCCTCTGCGT
CGCACAAGGGCGGGGGTTCATATCTACCGGTACCGGAGGGAATAGTGCCT
AGCCATGCGCTGCTCCTCCTGTCGGATTCAGCCCTTCCCTTGGGCTCGTT
CGCCTACTCCAGCGGTCTCGAGTCGTATTTGGCGCACAACAAACCCCTTC
CTCGCTCGGTGACGCCGATTGCATCCTTCCAGCGCTTCCTGAAGCTCTCG
ATCGCTTCAATGGCAAGTACCTCACTTCCATACGTTCTGGCAGGATACAG
ACGCCCAGAAGACTTGGAGACCCTGGACAATGACCTCGATGCGTCCACCC
CCTGCATAGTTGCCCAGCGGGCGAGTCTCGCCCAAGGGCGGGCATTGCTC
GGGGTCTGGGAGCGCGCTTTCCGGAAAACGTATGCGTTCAACCCATTCCA
CGCTAACCCCAACACTGCCGAGGCTGTGAAGGTGGTTGAGGAATTCTCCG
AGATATTGAAGTCCTCGTTGGGTACTGATGAACTAGGGCCCAAAGGTCAC
TTTGCGCCATTATGGGGGGTGGTGTGTCTGGCCATGGGCATGGACGCCCA
CCAGACTGCCTATGTCTTTATGTTGAACCATGCAAAGGCAGTCCTTAGCG
CTGCTGTCCGTGCGTCCGTCATGGGCCCGTATCAGGCCCAGAACATTCTG
GCCAGCAAGGGCCTACAAAACATGATCACTCAACGCATAGAACGGGAGTG
GGATACTCCCGTCGAAGATGCAGGACAAATCGTCCCACCCCTCGATCTTT
GGGTGGGACGACATGAACTTCTATATAGTAGAATCTTTAACTCATAAATG
ACAGTGAAGACCAACGTGCAGGATATCGAGCAAGAGATCGTGGATCTCGA
GGACCGTCTGCGCAATGCACGTGCTCGTCTAGCGTCGGCCTCTGCGTCGC
ACAAGGGCGGGGGTTCATATCTACCGGTACCGGAGGGAATAGTGCCTAGC
CATGCGCTGCTCCTCCTGTCGGATTCAGCCCTTCCCTTGGGCTCGTTCGC
CTACTCCAGCGGTCTCGAGTCGTATTTGGCGCACAACAAACCCCTTCCTC
GCTCGGTGACGCCGATTGCATCCTTCCAGCGCTTCCTGAAGCTCTCGATC
GCTTCAATGGCAAGTACCTCACTTCCATACGTTCTGGCAGGATACAGACG
CCCAGAAGACTTGGAGACCCTGGACAATGACCTCGATGCGTCCACCCCCT
GCATAGTTGCCCAGCGGGCGAGTCTCGCCCAAGGGCGGGCATTGCTCGGG
GTCTGGGAGCGCGCTTTCCGGAAAACGTATGCGTTCAACCCATTCCACGC
TAACCCCAACACTGCCGAGGCTGTGAAGGTGGTTGAGGAATTCTCCGAGA
TATTGAAGTCCTCGTTGGGTACTGATGAACTAGGGCCCAAAGGTCACTTT
GCGCCATTATGGGGGGTGGTGTGTCTGGCCATGGGCATGGACGCCCACCA
GACTGCCTATGTCTTTATGTTGAACCATGCAAAGGCAGTCCTTAGCGCTG
CTGTCCGTGCGTCCGTCATGGGCCCGTATCAGGCCCAGAACATTCTGGCC
AGCAAGGGCCTACAAAACATGATCACTCAACGCATAGAACGGGAGTGGGA
TACTCCCGTCGAAGATGCAGGACAAATCGTCCCACCCCTCGATCTTTGGG
TGGGACGACATGAACTTCTATATAGTAGAATCTTTAACTCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016151 | nickel cation binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006807 | nitrogen compound metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002639 |
| DBxref | InterPro:IPR038277 |
| DBxref | PFAM:PF01730 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:255833..256827 + |
|
