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CBS51388_009515-T1, CBS51388_009515-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009515-T1
Unique NameCBS51388_009515-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An15:1078849..1080812+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009515-T1 ID=CBS51388_009515-T1|Name=CBS51388_009515-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1964bp|location=Sequence derived from alignment at An15:1078849..1080812+ (Aspergillus niger CBS 513.88)
ATGTTAGGCAATAACTTGGCCCACAACGGTGCCATCCAGCAAGTCCCCGG
ATTTCTTCGGCGAAAGCGCAAAGCTGTCAATTGCGAGGAATGCCGACGCT
CTAAGTTGCGATGCGATCGCCAAAACCCTTGTGGTGCGTGCAAGCGTCGC
AAGCGCGAGTATAATTGCTCCTACGAAGCCCTGTCTGGCCCATCTGTATC
AAGGAAAACTCACAGGCAGCCTGTAACTACTTCGGCGTCACCTGCCTTAA
ATGGTGGGGCAGGATCTCCGTCTACGCCTAGACGAAAAGGTGTTTTCTCT
TCAAATCTACGACCCGAACAGCCTACATCAGGATTAGAGAAATCATCTCC
GGGTGTACACTGGGAAACTGTGCTTGAACGGCCTGTTCCCGAGGAGGATG
TTAATGACACGCTATCACCCCTCTCAATCGGCCCTCGCATCTCTCTCCAG
GAAATGATTGACTCGCTTCCGCCGAAGTCTTGTTGCGACTATCTGGTCTC
ACACTTCTTTAAACATATATCCGCCCTGTTTCCCATTCTGCATGGCCCAA
CTTTTCAGAAACAGTATACAGCGTTCATGCAACGGCCTCATGACGTCGAC
TTACCTTGGCTGGCTTTGCTTTTCGCGTTATGTTCTTTGTCTCTGAACAC
TCTAGATGAAAGTGACCCCAGGCTAGCGTGCGTCTGGTCTCAACTACCTT
CGAATGTTACCCAAGGTGCAAGTACGGTTCCTGTCACGGTTTCTGTGTCT
CGCCGCCTGCTCCGGACTGCAATAACCTGTCTCCTGCAGGGTGACTTCTT
GATCCGGCACACTTTCAGCACGTTCGAAGCTCTATTAATGGTAATATACA
GCCTTTCTCACAATGAGTCCGTCGATCAAGGCTGGGCCCTGTTAGGAATG
GCGCTAAATATTGGCATTGCCTTGCGTTGCAATGTGGAGCAGAAAAACAT
GGGCCCAATTGAGACCGAAAGACGGCGACGTTGTTGGGCTGGCCTCTTGA
CATTGCACACGTATCAGGGAATGCTATTCCGGGACTTTGATATGTCATAC
CTTCTCGGCATTGAAGCTCCTCTACCTGCTGATGTTAACGATGTCGATAT
CACCAGCGAAGGCATTGTGCAGCAGTCTCGTAGCGAGCCCACACAGATGT
CTGTCATGATGGCTAAGCTTCGGCTGTTCCGGCTTTCCACCCAGATCTGT
CGCCATACCTCGGGCCCTTCACGTCTCGACCAACAGGCCCTGCGTAACTT
CGATGCTGCGATAGCGGACGAGCAAAAACAGTGGGACGCGGCCTATATGG
TTGATGGTTCTCCAAACATTCTGGACTCTAATCGCTACGCATATTGGTGC
GTCTTGCAAACGTACGCGCATCATCTCTACCTCCTGCTACACCGACCGTT
TCACCATTCCAAGGCGCCTTATTTTCTTCCAATGTCCAGAGAAAGATGTA
TAAGTTCCAGCACAGCTTTGATTTCCCTTCACAGACAACTTTACGAAGCT
CCTATCCTCCGAGATTATTTCTGGCTGCTCAGTGGGGTGACAAGTCTGAA
AGCATTACATGCGGCCGTGGCCCTGAATTCGTGTCTCCAAGATGATACCG
AACATAACTTGGACTCTTTTCGAGGGGAGATCGAAAGTCTGATTGCCCGC
ATGGCAGATCTCTCAAGCCGAAGTCATATCTGTCTCCGAGCGTATCGAAT
ACTCCGCCATTTACAGTAAGCTACCCAGATAAATTCTCAAATTAGCCAAC
TAAATCAGTGATCTATAGAGCCCAAGCAGGGACGGGCGATGCCCAGACAG
GGAGCTCGGAGACCCCGTTCGAAAATTTATTCGAAGATTTGACGGATATC
CGGGAGTGGATGGATGCAGATCTGGTCGATTGGGTATGTTACCTCCCTCT
AGATACTGAGCCTTTTGCTAATGATCAGAATCTGGACGGACAATTCAACG
TCTTTGCGCCATAA
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Coding sequence (CDS) from alignment at An15:1078849..1080812+

>CBS51388_009515-T1 ID=CBS51388_009515-T1|Name=CBS51388_009515-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6972bp|location=Sequence derived from alignment at An15:1078849..1080812+ (Aspergillus niger CBS 513.88)
ATGTTAGGCAATAACTTGGCCCACAACGGTGCCATCCAGCAAGTCCCCGG
ATTTCTTCGGCGAAAGCGCAAAGCTGTCAATTGCGAGGAATGCCGACGCT
CTAAGTTGCGATGCGATCGCCAAAACCCTTGTGGTGCGTGCAAGCGTCGC
AAGCGCGAGTATAATTGCTCCTACGAAGCCCTGTCTGGCCCATCTGTATC
AAGGAAAACTCACAGGCAGCCTGTAACTACTTCGGCGTCACCTGCCTTAA
ATGGTGGGGCAGGATCTCCGTCTACGCCTAGACGAAAAGGTGTTTTCTCT
TCAAATCTACGACCCGAACAGCCTACATCAGGATTAGAGAAATCATCTCC
GGGTGTACACTGGGAAACTGTGCTTGAACGGCCTGTTCCCGAGGAGGATG
TTAATGACACGCTATCACCCCTCTCAATCGGCCCTCGCATCTCTCTCCAG
GAAATGATTGACTCGCTTCCGCCGAAGTCTTGTTGCGACTATCTGGTCTC
ACACTTCTTTAAACATATATCCGCCCTGTTTCCCATTCTGCATGGCCCAA
CTTTTCAGAAACAGTATACAGCGTTCATGCAACGGCCTCATGACGTCGAC
TTACCTTGGCTGGCTTTGCTTTTCGCGTTATGTTCTTTGTCTCTGAACAC
TCTAGATGAAAGTGACCCCAGGCTAGCGTGCGTCTGGTCTCAACTACCTT
CGAATGTTACCCAAGGTGCAAGTACGGTTCCTGTCACGGTTTCTGTGTCT
CGCCGCCTGCTCCGGACTGCAATAACCTGTCTCCTGCAGGGTGACTTCTT
GATCCGGCACACTTTCAGCACGTTCGAAGCTCTATTAATGGTAATATACA
GCCTTTCTCACAATGAGTCCGTCGATCAAGGCTGGGCCCTGTTAGGAATG
GCGCTAAATATTGGCATTGCCTTGCGTTGCAATGTGGAGCAGAAAAACAT
GGGCCCAATTGAGACCGAAAGACGGCGACGTTGTTGGGCTGGCCTCTTGA
CATTGCACACGTATCAGGGAATGCTATTCCGGGACTTTGATATGTCATAC
CTTCTCGGCATTGAAGCTCCTCTACCTGCTGATGTTAACGATGTCGATAT
CACCAGCGAAGGCATTGTGCAGCAGTCTCGTAGCGAGCCCACACAGATGT
CTGTCATGATGGCTAAGCTTCGGCTGTTCCGGCTTTCCACCCAGATCTGT
CGCCATACCTCGGGCCCTTCACGTCTCGACCAACAGGCCCTGCGTAACTT
CGATGCTGCGATAGCGGACGAGCAAAAACAGTGGGACGCGGCCTATATGG
TTGATGGTTCTCCAAACATTCTGGACTCTAATCGCTACGCATATTGGTGC
GTCTTGCAAACACAACTTTACGAAGCTCCTATCCTCCGAGATTATTTCTG
GCTGCTCAGTGGGGTGACAAGTCTGAAAGCATTACATGCGGCCGTGGCCC
TGAATTCGTGTCTCCAAGATGATACCGAACATAACTTGGACTCTTTTCGA
GGGGAGATCGAAAGTCTGATTGCCCGCATGGCAGATCTCTCAAGCCGAAG
TCATATCTGTCTCCGAGCGTATCGAATACTCCGCCATTTACAAGCCCAAG
CAGGGACGGGCGATGCCCAGACAGGGAGCTCGGAGACCCCGTTCGAAAAT
TTATTCGAAGATTTGACGGATATCCGGGAGTGGATGGATGCAGATCTGGT
CGATTGGAATCTGGACGGACAATTCAACGTCTTTGCGCCATAAATGTTAG
GCAATAACTTGGCCCACAACGGTGCCATCCAGCAAGTCCCCGGATTTCTT
CGGCGAAAGCGCAAAGCTGTCAATTGCGAGGAATGCCGACGCTCTAAGTT
GCGATGCGATCGCCAAAACCCTTGTGGTGCGTGCAAGCGTCGCAAGCGCG
AGTATAATTGCTCCTACGAAGCCCTGTCTGGCCCATCTGTATCAAGGAAA
ACTCACAGGCAGCCTGTAACTACTTCGGCGTCACCTGCCTTAAATGGTGG
GGCAGGATCTCCGTCTACGCCTAGACGAAAAGGTGTTTTCTCTTCAAATC
TACGACCCGAACAGCCTACATCAGGATTAGAGAAATCATCTCCGGGTGTA
CACTGGGAAACTGTGCTTGAACGGCCTGTTCCCGAGGAGGATGTTAATGA
CACGCTATCACCCCTCTCAATCGGCCCTCGCATCTCTCTCCAGGAAATGA
TTGACTCGCTTCCGCCGAAGTCTTGTTGCGACTATCTGGTCTCACACTTC
TTTAAACATATATCCGCCCTGTTTCCCATTCTGCATGGCCCAACTTTTCA
GAAACAGTATACAGCGTTCATGCAACGGCCTCATGACGTCGACTTACCTT
GGCTGGCTTTGCTTTTCGCGTTATGTTCTTTGTCTCTGAACACTCTAGAT
GAAAGTGACCCCAGGCTAGCGTGCGTCTGGTCTCAACTACCTTCGAATGT
TACCCAAGGTGCAAGTACGGTTCCTGTCACGGTTTCTGTGTCTCGCCGCC
TGCTCCGGACTGCAATAACCTGTCTCCTGCAGGGTGACTTCTTGATCCGG
CACACTTTCAGCACGTTCGAAGCTCTATTAATGGTAATATACAGCCTTTC
TCACAATGAGTCCGTCGATCAAGGCTGGGCCCTGTTAGGAATGGCGCTAA
ATATTGGCATTGCCTTGCGTTGCAATGTGGAGCAGAAAAACATGGGCCCA
ATTGAGACCGAAAGACGGCGACGTTGTTGGGCTGGCCTCTTGACATTGCA
CACGTATCAGGGAATGCTATTCCGGGACTTTGATATGTCATACCTTCTCG
GCATTGAAGCTCCTCTACCTGCTGATGTTAACGATGTCGATATCACCAGC
GAAGGCATTGTGCAGCAGTCTCGTAGCGAGCCCACACAGATGTCTGTCAT
GATGGCTAAGCTTCGGCTGTTCCGGCTTTCCACCCAGATCTGTCGCCATA
CCTCGGGCCCTTCACGTCTCGACCAACAGGCCCTGCGTAACTTCGATGCT
GCGATAGCGGACGAGCAAAAACAGTGGGACGCGGCCTATATGGTTGATGG
TTCTCCAAACATTCTGGACTCTAATCGCTACGCATATTGGTGCGTCTTGC
AAACACAACTTTACGAAGCTCCTATCCTCCGAGATTATTTCTGGCTGCTC
AGTGGGGTGACAAGTCTGAAAGCATTACATGCGGCCGTGGCCCTGAATTC
GTGTCTCCAAGATGATACCGAACATAACTTGGACTCTTTTCGAGGGGAGA
TCGAAAGTCTGATTGCCCGCATGGCAGATCTCTCAAGCCGAAGTCATATC
TGTCTCCGAGCGTATCGAATACTCCGCCATTTACAAGCCCAAGCAGGGAC
GGGCGATGCCCAGACAGGGAGCTCGGAGACCCCGTTCGAAAATTTATTCG
AAGATTTGACGGATATCCGGGAGTGGATGGATGCAGATCTGGTCGATTGG
AATCTGGACGGACAATTCAACGTCTTTGCGCCATAAATGTTAGGCAATAA
CTTGGCCCACAACGGTGCCATCCAGCAAGTCCCCGGATTTCTTCGGCGAA
AGCGCAAAGCTGTCAATTGCGAGGAATGCCGACGCTCTAAGTTGCGATGC
GATCGCCAAAACCCTTGTGGTGCGTGCAAGCGTCGCAAGCGCGAGTATAA
TTGCTCCTACGAAGCCCTGTCTGGCCCATCTGTATCAAGGAAAACTCACA
GGCAGCCTGTAACTACTTCGGCGTCACCTGCCTTAAATGGTGGGGCAGGA
TCTCCGTCTACGCCTAGACGAAAAGGTGTTTTCTCTTCAAATCTACGACC
CGAACAGCCTACATCAGGATTAGAGAAATCATCTCCGGGTGTACACTGGG
AAACTGTGCTTGAACGGCCTGTTCCCGAGGAGGATGTTAATGACACGCTA
TCACCCCTCTCAATCGGCCCTCGCATCTCTCTCCAGGAAATGATTGACTC
GCTTCCGCCGAAGTCTTGTTGCGACTATCTGGTCTCACACTTCTTTAAAC
ATATATCCGCCCTGTTTCCCATTCTGCATGGCCCAACTTTTCAGAAACAG
TATACAGCGTTCATGCAACGGCCTCATGACGTCGACTTACCTTGGCTGGC
TTTGCTTTTCGCGTTATGTTCTTTGTCTCTGAACACTCTAGATGAAAGTG
ACCCCAGGCTAGCGTGCGTCTGGTCTCAACTACCTTCGAATGTTACCCAA
GGTGCAAGTACGGTTCCTGTCACGGTTTCTGTGTCTCGCCGCCTGCTCCG
GACTGCAATAACCTGTCTCCTGCAGGGTGACTTCTTGATCCGGCACACTT
TCAGCACGTTCGAAGCTCTATTAATGGTAATATACAGCCTTTCTCACAAT
GAGTCCGTCGATCAAGGCTGGGCCCTGTTAGGAATGGCGCTAAATATTGG
CATTGCCTTGCGTTGCAATGTGGAGCAGAAAAACATGGGCCCAATTGAGA
CCGAAAGACGGCGACGTTGTTGGGCTGGCCTCTTGACATTGCACACGTAT
CAGGGAATGCTATTCCGGGACTTTGATATGTCATACCTTCTCGGCATTGA
AGCTCCTCTACCTGCTGATGTTAACGATGTCGATATCACCAGCGAAGGCA
TTGTGCAGCAGTCTCGTAGCGAGCCCACACAGATGTCTGTCATGATGGCT
AAGCTTCGGCTGTTCCGGCTTTCCACCCAGATCTGTCGCCATACCTCGGG
CCCTTCACGTCTCGACCAACAGGCCCTGCGTAACTTCGATGCTGCGATAG
CGGACGAGCAAAAACAGTGGGACGCGGCCTATATGGTTGATGGTTCTCCA
AACATTCTGGACTCTAATCGCTACGCATATTGGTGCGTCTTGCAAACACA
ACTTTACGAAGCTCCTATCCTCCGAGATTATTTCTGGCTGCTCAGTGGGG
TGACAAGTCTGAAAGCATTACATGCGGCCGTGGCCCTGAATTCGTGTCTC
CAAGATGATACCGAACATAACTTGGACTCTTTTCGAGGGGAGATCGAAAG
TCTGATTGCCCGCATGGCAGATCTCTCAAGCCGAAGTCATATCTGTCTCC
GAGCGTATCGAATACTCCGCCATTTACAAGCCCAAGCAGGGACGGGCGAT
GCCCAGACAGGGAGCTCGGAGACCCCGTTCGAAAATTTATTCGAAGATTT
GACGGATATCCGGGAGTGGATGGATGCAGATCTGGTCGATTGGAATCTGG
ACGGACAATTCAACGTCTTTGCGCCATAAATGTTAGGCAATAACTTGGCC
CACAACGGTGCCATCCAGCAAGTCCCCGGATTTCTTCGGCGAAAGCGCAA
AGCTGTCAATTGCGAGGAATGCCGACGCTCTAAGTTGCGATGCGATCGCC
AAAACCCTTGTGGTGCGTGCAAGCGTCGCAAGCGCGAGTATAATTGCTCC
TACGAAGCCCTGTCTGGCCCATCTGTATCAAGGAAAACTCACAGGCAGCC
TGTAACTACTTCGGCGTCACCTGCCTTAAATGGTGGGGCAGGATCTCCGT
CTACGCCTAGACGAAAAGGTGTTTTCTCTTCAAATCTACGACCCGAACAG
CCTACATCAGGATTAGAGAAATCATCTCCGGGTGTACACTGGGAAACTGT
GCTTGAACGGCCTGTTCCCGAGGAGGATGTTAATGACACGCTATCACCCC
TCTCAATCGGCCCTCGCATCTCTCTCCAGGAAATGATTGACTCGCTTCCG
CCGAAGTCTTGTTGCGACTATCTGGTCTCACACTTCTTTAAACATATATC
CGCCCTGTTTCCCATTCTGCATGGCCCAACTTTTCAGAAACAGTATACAG
CGTTCATGCAACGGCCTCATGACGTCGACTTACCTTGGCTGGCTTTGCTT
TTCGCGTTATGTTCTTTGTCTCTGAACACTCTAGATGAAAGTGACCCCAG
GCTAGCGTGCGTCTGGTCTCAACTACCTTCGAATGTTACCCAAGGTGCAA
GTACGGTTCCTGTCACGGTTTCTGTGTCTCGCCGCCTGCTCCGGACTGCA
ATAACCTGTCTCCTGCAGGGTGACTTCTTGATCCGGCACACTTTCAGCAC
GTTCGAAGCTCTATTAATGGTAATATACAGCCTTTCTCACAATGAGTCCG
TCGATCAAGGCTGGGCCCTGTTAGGAATGGCGCTAAATATTGGCATTGCC
TTGCGTTGCAATGTGGAGCAGAAAAACATGGGCCCAATTGAGACCGAAAG
ACGGCGACGTTGTTGGGCTGGCCTCTTGACATTGCACACGTATCAGGGAA
TGCTATTCCGGGACTTTGATATGTCATACCTTCTCGGCATTGAAGCTCCT
CTACCTGCTGATGTTAACGATGTCGATATCACCAGCGAAGGCATTGTGCA
GCAGTCTCGTAGCGAGCCCACACAGATGTCTGTCATGATGGCTAAGCTTC
GGCTGTTCCGGCTTTCCACCCAGATCTGTCGCCATACCTCGGGCCCTTCA
CGTCTCGACCAACAGGCCCTGCGTAACTTCGATGCTGCGATAGCGGACGA
GCAAAAACAGTGGGACGCGGCCTATATGGTTGATGGTTCTCCAAACATTC
TGGACTCTAATCGCTACGCATATTGGTGCGTCTTGCAAACACAACTTTAC
GAAGCTCCTATCCTCCGAGATTATTTCTGGCTGCTCAGTGGGGTGACAAG
TCTGAAAGCATTACATGCGGCCGTGGCCCTGAATTCGTGTCTCCAAGATG
ATACCGAACATAACTTGGACTCTTTTCGAGGGGAGATCGAAAGTCTGATT
GCCCGCATGGCAGATCTCTCAAGCCGAAGTCATATCTGTCTCCGAGCGTA
TCGAATACTCCGCCATTTACAAGCCCAAGCAGGGACGGGCGATGCCCAGA
CAGGGAGCTCGGAGACCCCGTTCGAAAATTTATTCGAAGATTTGACGGAT
ATCCGGGAGTGGATGGATGCAGATCTGGTCGATTGGAATCTGGACGGACA
ATTCAACGTCTTTGCGCCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009515CBS51388_009515Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009515-T1.exon1CBS51388_009515-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009515-T1.exon2CBS51388_009515-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009515-T1.exon3CBS51388_009515-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009515-T1.exon4CBS51388_009515-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009515-T1.cdsCBS51388_009515-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009515-T1CBS51388_009515-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An15supercontigAn15:1078849..1080812 +
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