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Sequences
The following sequences are available for this feature:
mRNA from alignment at An15:1394415..1396246+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009627-T1 ID=CBS51388_009627-T1|Name=CBS51388_009627-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1832bp|location=Sequence derived from alignment at An15:1394415..1396246+ (Aspergillus niger CBS 513.88)
ATGGCCTCCTTGCGCCCCGGGCCGACCGAGGCCATCTCCGTCTCCAGTGG
ATCATCGTCTACCCCTCAGTATACGCCTGTCTCTGATCGCTCCGAGAATG
ATGGTTCTCCCAATCCAAATCGACCAACGGCTGGGTCCCTGAGAGTTCAG
ACAGCCTTCAGCTCAGACGGGGAGTCGTTTACTGACGACGGGTTCGATGA
AGGATATGAATCCTACGAAGATGTGCAGCCCCTTTCGAGTAGTAGAACTA
GCATGCCAAAGTACACAAAAGAGGAAGAGAAGGGGGTCATCAAGCAATTC
GATCGCAAATTGGTCCCTTTTCTAGCTCTCCTCTATCTGCTTTCGTTTCT
AGATCGCTCAAGTACGTGGTTTGTCCACTATCGCAGCCAAGACCTTCTAT
AAAACCACACGTTACCCATCATAAGATTGATATCAGCTAACACTAAGCCA
GACATTGGAAATGCCAAAATCGCCGGTCTCGCAGACGACCTGCATCTCTC
GTCATCGCAATATGAATGGCTCCTCACGGCCTTCTACATCACCTACATCC
TCTTCGAATGGATGACGCTCATGTACAAAGTCGTCCCACCGCACATCTAC
ATCGCTCTCTGCGTCTGCGGCTGGGGCCTCGTCGCATCTTTACAATCGCT
CGCTACTTCATTCGGAGCCCTCGTCTTCCTTCGAGCAGCTCTCGGCATCA
CCGAAGCAGCATTCGGCCCTGGCGTGCCCTTCTATCTTTCACTCTTCTAC
AAGCGCGAAGAGCTCGCCTTCCGAAACGGCCTCTTCATCTCCGCTGCTCC
CCTCGCCTCATCCTTCGCCAGCAGCCTAGCCTGGCTCATTGTCCGCGTGA
GCGACAACGGCCCAATCGCTCCCTGGCGTACCCTCTTCCTAGTCGAAGGG
TTCCCCAGCATCATCGTCGCCGTCTTCGCCTGGGTAGTCATCCCCGATAC
ACCAGGCAGCGCCTCATTCCTGAACCCCCGGCAGCGGGCAATCGCACAGC
TCCGCATGGACGAGCTCAAACCAAACCACAGACCACATCAGCAGCAATCG
CAGCAACGCAAATCCTTCAACTGGAAAGAAGTCAAGAAGACCCTCGCCGA
TCCCAAATCCTACATCACAGCCGTGAGCTACCCTCCATCTCTTCCCCCCT
CTCCTCTGCCCCAACTAATATCCAACAACACAGTTCATGTTCTTCAGCTG
CAACGTCGCCTTCAGCTCCATGCCTGTCTTCCTTCCCACTATAATCCAAG
AGTGAATACTTACCCCTTCCCCCAAATACTCCCCCAAAAAACTAACAAAA
CCAAAACAGCATGGGCTACAGCTCCCTAACATCCCAAGCCCTCTCCGCCC
CACCGTACCTCCTCTCCTTCCTAACCGTCCTCTTAACATCCCACCTCTCG
GACCGCACACGCACGCGCAGCCCCTACCTCATCTTCCACGCGCTCTTGTC
CGCAACCGCCTACGCCGCAATCGCCCTGGCGGGGCATTTCCACTCCTCCC
TCCCATCTCCCATCCACGTCGCAATTCGCTACCTGGCCGTCTACCCCGCC
ACATCGGGGTTCTTCTCCGCCATCACGCTAATCATCACCTGGACCATGGA
CAACCGGCCCGCGAACGAGGGGAAGGGCGCCAGCGTGGCCCTGCTGAATG
TCATTGGGCAGTGCGGGCCGCTGCTCGGCACGAGGCTGTATCCGGCGAGT
CAGGGGCCGTGGTATGTCTCCCGGGATGGCGGTCTGCGCGGGGTTTATGG
TACTTGTGGCGGCGTTGGCGGGGTTGTTGAGATGGTTGCTGGGGAGGGAG
ATGAGGGGAAGGGAGATGGGGAAGGGGGATGA back to topCoding sequence (CDS) from alignment at An15:1394415..1396246+ >CBS51388_009627-T1 ID=CBS51388_009627-T1|Name=CBS51388_009627-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6492bp|location=Sequence derived from alignment at An15:1394415..1396246+ (Aspergillus niger CBS 513.88)
ATGGCCTCCTTGCGCCCCGGGCCGACCGAGGCCATCTCCGTCTCCAGTGG
ATCATCGTCTACCCCTCAGTATACGCCTGTCTCTGATCGCTCCGAGAATG
ATGGTTCTCCCAATCCAAATCGACCAACGGCTGGGTCCCTGAGAGTTCAG
ACAGCCTTCAGCTCAGACGGGGAGTCGTTTACTGACGACGGGTTCGATGA
AGGATATGAATCCTACGAAGATGTGCAGCCCCTTTCGAGTAGTAGAACTA
GCATGCCAAAGTACACAAAAGAGGAAGAGAAGGGGGTCATCAAGCAATTC
GATCGCAAATTGGTCCCTTTTCTAGCTCTCCTCTATCTGCTTTCGTTTCT
AGATCGCTCAAACATTGGAAATGCCAAAATCGCCGGTCTCGCAGACGACC
TGCATCTCTCGTCATCGCAATATGAATGGCTCCTCACGGCCTTCTACATC
ACCTACATCCTCTTCGAATGGATGACGCTCATGTACAAAGTCGTCCCACC
GCACATCTACATCGCTCTCTGCGTCTGCGGCTGGGGCCTCGTCGCATCTT
TACAATCGCTCGCTACTTCATTCGGAGCCCTCGTCTTCCTTCGAGCAGCT
CTCGGCATCACCGAAGCAGCATTCGGCCCTGGCGTGCCCTTCTATCTTTC
ACTCTTCTACAAGCGCGAAGAGCTCGCCTTCCGAAACGGCCTCTTCATCT
CCGCTGCTCCCCTCGCCTCATCCTTCGCCAGCAGCCTAGCCTGGCTCATT
GTCCGCGTGAGCGACAACGGCCCAATCGCTCCCTGGCGTACCCTCTTCCT
AGTCGAAGGGTTCCCCAGCATCATCGTCGCCGTCTTCGCCTGGGTAGTCA
TCCCCGATACACCAGGCAGCGCCTCATTCCTGAACCCCCGGCAGCGGGCA
ATCGCACAGCTCCGCATGGACGAGCTCAAACCAAACCACAGACCACATCA
GCAGCAATCGCAGCAACGCAAATCCTTCAACTGGAAAGAAGTCAAGAAGA
CCCTCGCCGATCCCAAATCCTACATCACAGCCTTCATGTTCTTCAGCTGC
AACGTCGCCTTCAGCTCCATGCCTGTCTTCCTTCCCACTATAATCCAAGA
CATGGGCTACAGCTCCCTAACATCCCAAGCCCTCTCCGCCCCACCGTACC
TCCTCTCCTTCCTAACCGTCCTCTTAACATCCCACCTCTCGGACCGCACA
CGCACGCGCAGCCCCTACCTCATCTTCCACGCGCTCTTGTCCGCAACCGC
CTACGCCGCAATCGCCCTGGCGGGGCATTTCCACTCCTCCCTCCCATCTC
CCATCCACGTCGCAATTCGCTACCTGGCCGTCTACCCCGCCACATCGGGG
TTCTTCTCCGCCATCACGCTAATCATCACCTGGACCATGGACAACCGGCC
CGCGAACGAGGGGAAGGGCGCCAGCGTGGCCCTGCTGAATGTCATTGGGC
AGTGCGGGCCGCTGCTCGGCACGAGGCTGTATCCGGCGAGTCAGGGGCCG
TGGTATGTCTCCCGGGATGGCGGTCTGCGCGGGGTTTATGGTACTTGTGG
CGGCGTTGGCGGGGTTGTTGAGATGGTTGCTGGGGAGGGAGATGAGGGGA
AGGGAGATGGGGAAGGGGGATGAATGGCCTCCTTGCGCCCCGGGCCGACC
GAGGCCATCTCCGTCTCCAGTGGATCATCGTCTACCCCTCAGTATACGCC
TGTCTCTGATCGCTCCGAGAATGATGGTTCTCCCAATCCAAATCGACCAA
CGGCTGGGTCCCTGAGAGTTCAGACAGCCTTCAGCTCAGACGGGGAGTCG
TTTACTGACGACGGGTTCGATGAAGGATATGAATCCTACGAAGATGTGCA
GCCCCTTTCGAGTAGTAGAACTAGCATGCCAAAGTACACAAAAGAGGAAG
AGAAGGGGGTCATCAAGCAATTCGATCGCAAATTGGTCCCTTTTCTAGCT
CTCCTCTATCTGCTTTCGTTTCTAGATCGCTCAAACATTGGAAATGCCAA
AATCGCCGGTCTCGCAGACGACCTGCATCTCTCGTCATCGCAATATGAAT
GGCTCCTCACGGCCTTCTACATCACCTACATCCTCTTCGAATGGATGACG
CTCATGTACAAAGTCGTCCCACCGCACATCTACATCGCTCTCTGCGTCTG
CGGCTGGGGCCTCGTCGCATCTTTACAATCGCTCGCTACTTCATTCGGAG
CCCTCGTCTTCCTTCGAGCAGCTCTCGGCATCACCGAAGCAGCATTCGGC
CCTGGCGTGCCCTTCTATCTTTCACTCTTCTACAAGCGCGAAGAGCTCGC
CTTCCGAAACGGCCTCTTCATCTCCGCTGCTCCCCTCGCCTCATCCTTCG
CCAGCAGCCTAGCCTGGCTCATTGTCCGCGTGAGCGACAACGGCCCAATC
GCTCCCTGGCGTACCCTCTTCCTAGTCGAAGGGTTCCCCAGCATCATCGT
CGCCGTCTTCGCCTGGGTAGTCATCCCCGATACACCAGGCAGCGCCTCAT
TCCTGAACCCCCGGCAGCGGGCAATCGCACAGCTCCGCATGGACGAGCTC
AAACCAAACCACAGACCACATCAGCAGCAATCGCAGCAACGCAAATCCTT
CAACTGGAAAGAAGTCAAGAAGACCCTCGCCGATCCCAAATCCTACATCA
CAGCCTTCATGTTCTTCAGCTGCAACGTCGCCTTCAGCTCCATGCCTGTC
TTCCTTCCCACTATAATCCAAGACATGGGCTACAGCTCCCTAACATCCCA
AGCCCTCTCCGCCCCACCGTACCTCCTCTCCTTCCTAACCGTCCTCTTAA
CATCCCACCTCTCGGACCGCACACGCACGCGCAGCCCCTACCTCATCTTC
CACGCGCTCTTGTCCGCAACCGCCTACGCCGCAATCGCCCTGGCGGGGCA
TTTCCACTCCTCCCTCCCATCTCCCATCCACGTCGCAATTCGCTACCTGG
CCGTCTACCCCGCCACATCGGGGTTCTTCTCCGCCATCACGCTAATCATC
ACCTGGACCATGGACAACCGGCCCGCGAACGAGGGGAAGGGCGCCAGCGT
GGCCCTGCTGAATGTCATTGGGCAGTGCGGGCCGCTGCTCGGCACGAGGC
TGTATCCGGCGAGTCAGGGGCCGTGGTATGTCTCCCGGGATGGCGGTCTG
CGCGGGGTTTATGGTACTTGTGGCGGCGTTGGCGGGGTTGTTGAGATGGT
TGCTGGGGAGGGAGATGAGGGGAAGGGAGATGGGGAAGGGGGATGAATGG
CCTCCTTGCGCCCCGGGCCGACCGAGGCCATCTCCGTCTCCAGTGGATCA
TCGTCTACCCCTCAGTATACGCCTGTCTCTGATCGCTCCGAGAATGATGG
TTCTCCCAATCCAAATCGACCAACGGCTGGGTCCCTGAGAGTTCAGACAG
CCTTCAGCTCAGACGGGGAGTCGTTTACTGACGACGGGTTCGATGAAGGA
TATGAATCCTACGAAGATGTGCAGCCCCTTTCGAGTAGTAGAACTAGCAT
GCCAAAGTACACAAAAGAGGAAGAGAAGGGGGTCATCAAGCAATTCGATC
GCAAATTGGTCCCTTTTCTAGCTCTCCTCTATCTGCTTTCGTTTCTAGAT
CGCTCAAACATTGGAAATGCCAAAATCGCCGGTCTCGCAGACGACCTGCA
TCTCTCGTCATCGCAATATGAATGGCTCCTCACGGCCTTCTACATCACCT
ACATCCTCTTCGAATGGATGACGCTCATGTACAAAGTCGTCCCACCGCAC
ATCTACATCGCTCTCTGCGTCTGCGGCTGGGGCCTCGTCGCATCTTTACA
ATCGCTCGCTACTTCATTCGGAGCCCTCGTCTTCCTTCGAGCAGCTCTCG
GCATCACCGAAGCAGCATTCGGCCCTGGCGTGCCCTTCTATCTTTCACTC
TTCTACAAGCGCGAAGAGCTCGCCTTCCGAAACGGCCTCTTCATCTCCGC
TGCTCCCCTCGCCTCATCCTTCGCCAGCAGCCTAGCCTGGCTCATTGTCC
GCGTGAGCGACAACGGCCCAATCGCTCCCTGGCGTACCCTCTTCCTAGTC
GAAGGGTTCCCCAGCATCATCGTCGCCGTCTTCGCCTGGGTAGTCATCCC
CGATACACCAGGCAGCGCCTCATTCCTGAACCCCCGGCAGCGGGCAATCG
CACAGCTCCGCATGGACGAGCTCAAACCAAACCACAGACCACATCAGCAG
CAATCGCAGCAACGCAAATCCTTCAACTGGAAAGAAGTCAAGAAGACCCT
CGCCGATCCCAAATCCTACATCACAGCCTTCATGTTCTTCAGCTGCAACG
TCGCCTTCAGCTCCATGCCTGTCTTCCTTCCCACTATAATCCAAGACATG
GGCTACAGCTCCCTAACATCCCAAGCCCTCTCCGCCCCACCGTACCTCCT
CTCCTTCCTAACCGTCCTCTTAACATCCCACCTCTCGGACCGCACACGCA
CGCGCAGCCCCTACCTCATCTTCCACGCGCTCTTGTCCGCAACCGCCTAC
GCCGCAATCGCCCTGGCGGGGCATTTCCACTCCTCCCTCCCATCTCCCAT
CCACGTCGCAATTCGCTACCTGGCCGTCTACCCCGCCACATCGGGGTTCT
TCTCCGCCATCACGCTAATCATCACCTGGACCATGGACAACCGGCCCGCG
AACGAGGGGAAGGGCGCCAGCGTGGCCCTGCTGAATGTCATTGGGCAGTG
CGGGCCGCTGCTCGGCACGAGGCTGTATCCGGCGAGTCAGGGGCCGTGGT
ATGTCTCCCGGGATGGCGGTCTGCGCGGGGTTTATGGTACTTGTGGCGGC
GTTGGCGGGGTTGTTGAGATGGTTGCTGGGGAGGGAGATGAGGGGAAGGG
AGATGGGGAAGGGGGATGAATGGCCTCCTTGCGCCCCGGGCCGACCGAGG
CCATCTCCGTCTCCAGTGGATCATCGTCTACCCCTCAGTATACGCCTGTC
TCTGATCGCTCCGAGAATGATGGTTCTCCCAATCCAAATCGACCAACGGC
TGGGTCCCTGAGAGTTCAGACAGCCTTCAGCTCAGACGGGGAGTCGTTTA
CTGACGACGGGTTCGATGAAGGATATGAATCCTACGAAGATGTGCAGCCC
CTTTCGAGTAGTAGAACTAGCATGCCAAAGTACACAAAAGAGGAAGAGAA
GGGGGTCATCAAGCAATTCGATCGCAAATTGGTCCCTTTTCTAGCTCTCC
TCTATCTGCTTTCGTTTCTAGATCGCTCAAACATTGGAAATGCCAAAATC
GCCGGTCTCGCAGACGACCTGCATCTCTCGTCATCGCAATATGAATGGCT
CCTCACGGCCTTCTACATCACCTACATCCTCTTCGAATGGATGACGCTCA
TGTACAAAGTCGTCCCACCGCACATCTACATCGCTCTCTGCGTCTGCGGC
TGGGGCCTCGTCGCATCTTTACAATCGCTCGCTACTTCATTCGGAGCCCT
CGTCTTCCTTCGAGCAGCTCTCGGCATCACCGAAGCAGCATTCGGCCCTG
GCGTGCCCTTCTATCTTTCACTCTTCTACAAGCGCGAAGAGCTCGCCTTC
CGAAACGGCCTCTTCATCTCCGCTGCTCCCCTCGCCTCATCCTTCGCCAG
CAGCCTAGCCTGGCTCATTGTCCGCGTGAGCGACAACGGCCCAATCGCTC
CCTGGCGTACCCTCTTCCTAGTCGAAGGGTTCCCCAGCATCATCGTCGCC
GTCTTCGCCTGGGTAGTCATCCCCGATACACCAGGCAGCGCCTCATTCCT
GAACCCCCGGCAGCGGGCAATCGCACAGCTCCGCATGGACGAGCTCAAAC
CAAACCACAGACCACATCAGCAGCAATCGCAGCAACGCAAATCCTTCAAC
TGGAAAGAAGTCAAGAAGACCCTCGCCGATCCCAAATCCTACATCACAGC
CTTCATGTTCTTCAGCTGCAACGTCGCCTTCAGCTCCATGCCTGTCTTCC
TTCCCACTATAATCCAAGACATGGGCTACAGCTCCCTAACATCCCAAGCC
CTCTCCGCCCCACCGTACCTCCTCTCCTTCCTAACCGTCCTCTTAACATC
CCACCTCTCGGACCGCACACGCACGCGCAGCCCCTACCTCATCTTCCACG
CGCTCTTGTCCGCAACCGCCTACGCCGCAATCGCCCTGGCGGGGCATTTC
CACTCCTCCCTCCCATCTCCCATCCACGTCGCAATTCGCTACCTGGCCGT
CTACCCCGCCACATCGGGGTTCTTCTCCGCCATCACGCTAATCATCACCT
GGACCATGGACAACCGGCCCGCGAACGAGGGGAAGGGCGCCAGCGTGGCC
CTGCTGAATGTCATTGGGCAGTGCGGGCCGCTGCTCGGCACGAGGCTGTA
TCCGGCGAGTCAGGGGCCGTGGTATGTCTCCCGGGATGGCGGTCTGCGCG
GGGTTTATGGTACTTGTGGCGGCGTTGGCGGGGTTGTTGAGATGGTTGCT
GGGGAGGGAGATGAGGGGAAGGGAGATGGGGAAGGGGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An15 | supercontig | An15:1394415..1396246 + |
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