CBS51388_009665-T1, CBS51388_009665-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_009665-T1
Unique Name	CBS51388_009665-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An15:1515673..1517342+
coding sequence from alignment at An15:1515673..1517342+

mRNA from alignment at An15:1515673..1517342+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_009665-T1 ID=CBS51388_009665-T1|Name=CBS51388_009665-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1670bp|location=Sequence derived from alignment at An15:1515673..1517342+ (Aspergillus niger CBS 513.88)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGGTTCGTGAGGCAAGACTTGACCCCTTCCTC
GGTGACAGACTGACGCTTTGACTGCAGATAAGGAACTTCAAAGGAGACCC
GTTGGGAGTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCC
TGGACCCGGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCAC
TTTGAGCCATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAG
CCTCACTGCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCAC
GTGGCTCCTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCG
CACAAGAGGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGA
CCTCGTGGGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCG
TCCTCTATTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAA
ATAAACGATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGG
TTACCAAAAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGA
CCCTCACAATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACAT
CTGAAGGATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAG
TCGCATCAATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATC
CAAATTCAGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTC
GAACAATTTCTGCAGCGTAGGACGGAATACTGGAAAGCGAATCCTCGGAA
GCGGGAACTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGA
AACAGCGAAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAACA
GCAGCAAGCAGCAAGCGATATGCGCCAAATGAAAACAGTAAGTCATGCCG
TCTTAGTAATAACCACTGGGGCATCTTACAGTTGATTAACAGTCTATGAT
AGTCATAGCAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAGCGATCC
TTTCCAACAAACTTCATGACAACATCTCATATGACAACATACAGTACCGC
TTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGCGTGGTCGATTT
CTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAGACTCCTCGGGTG
AGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAATGGCGC
TTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCAAGCGAA
AGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATCTATTAG
GGCTGACTGCAGTTGAGTAA

Coding sequence (CDS) from alignment at An15:1515673..1517342+

>CBS51388_009665-T1 ID=CBS51388_009665-T1|Name=CBS51388_009665-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4626bp|location=Sequence derived from alignment at An15:1515673..1517342+ (Aspergillus niger CBS 513.88)
ATGTCAGGCGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTC
TACGCAGGGCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCG
GAATATGGAAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAG
GACTCAGGTCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATA
TTTCAAAGACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGA
TCCTGATACGAGATCTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGA
GTCGCTGCCCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCC
GGATCCCACGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGC
CATCTCCTTCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACT
GCAGTCGATGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTC
CTATATTGTCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGA
GGCTTTCTCTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTG
GGGCAAATTGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTA
TTTCACCGATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACG
ATGCCGGTGACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAA
AAACGACCCAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCAC
AATCACACTCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGG
ATAACGATCTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATC
AATGGGATATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTC
AGTCAATGTACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAAT
TTCTGCAGCGTAGGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAA
CTCGAAAACGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCG
AAAGAAAGCCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAACAGCAGCAA
GCAGCAAGCGATATGCGCCAAATGAAAACACAGGCAGCCCGTCCGTCCCT
ACAATGTCCCTGGAAGCGATCCTTTCCAACAAACTTCATGACAACATCTC
ATATGACAACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCTACCGAA
CCACAGTCCGCGTGGTCGATTTCTTCCCCCCACGACTGGAAGACTTCTCC
GTCCCCGAAGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCGATCG
TTTCATTAGATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTC
CTCCACCCGCAGGTCAAGCGAAAGAACAGATGAGGTTGTTTGTAGCTGGC
CCAAATGCAGAGTATCTATTAGGGCTGACTGCAGTTGAGTAAATGTCAGG
CGGCTATGCCTCCCGGTTCGTGGATGTGTCCACCGCACTCTCTACGCAGG
GCAAAGTAAGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCGGAATATGG
AAGTCTAGAGGCTCGTCCAGCTGTATTACCTTCACCATCAAGGACTCAGG
TCTTGACAACGGACATACATGGGACGGGTTGAAAATCAAATATTTCAAAG
ACAATGAGAGCCATTTACCTCCCGTCCAACTACGCGACGTGATCCTGATA
CGAGATCTGTGGATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGCTGC
CCAGGACAGAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATCCCA
CGTCTAGCCCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCTCCT
TCAGAGAAGATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGTCGA
TGGTTTTCGCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATATTG
TCCAGGCTGCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTTTCT
CTTGTCAAGGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCAAAT
TGTCAAGGTCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCACCG
ATTACACGGCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCCGGT
GACAATGACTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACGACC
CAAGAAGAAATGGACAGGACCAGTTGGACGGATGACCCTCACAATCACAC
TCTGGGAACCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAACGAT
CTCATCCAGCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGGGAT
ATTAGAAGCCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCAATG
TACACACCCTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTGCAG
CGTAGGACGGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGAAAA
CGAAGGCCAGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGAAAG
CCGAAAAGGTGGAAGAAGGCCAAGTTCCCATAACAGCAGCAAGCAGCAAG
CGATATGCGCCAAATGAAAACACAGGCAGCCCGTCCGTCCCTACAATGTC
CCTGGAAGCGATCCTTTCCAACAAACTTCATGACAACATCTCATATGACA
ACATACAGTACCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTC
CGCGTGGTCGATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGA
AGACTCCTCGGGTGAGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTA
GATGGGAATGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCC
GCAGGTCAAGCGAAAGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGC
AGAGTATCTATTAGGGCTGACTGCAGTTGAGTAAATGTCAGGCGGCTATG
CCTCCCGGTTCGTGGATGTGTCCACCGCACTCTCTACGCAGGGCAAAGTA
AGTGTCATTGGCGTCGTAGTCGACGTCTTCGGCGGAATATGGAAGTCTAG
AGGCTCGTCCAGCTGTATTACCTTCACCATCAAGGACTCAGGTCTTGACA
ACGGACATACATGGGACGGGTTGAAAATCAAATATTTCAAAGACAATGAG
AGCCATTTACCTCCCGTCCAACTACGCGACGTGATCCTGATACGAGATCT
GTGGATAAGGAACTTCAAAGGAGACCCGTTGGGAGTCGCTGCCCAGGACA
GAGAAGTACCATGGGCAATCTTTCGCCTGGACCCGGATCCCACGTCTAGC
CCTGCGCCCCTTTGTGGCCCTACGCACTTTGAGCCATCTCCTTCAGAGAA
GATACATGCTTTGAATTTGTTGAATAGCCTCACTGCAGTCGATGGTTTTC
GCAAAGCTCCAGCACAAGATACTCCACGTGGCTCCTATATTGTCCAGGCT
GCAATTCCAAATTCCAAACCTTACCCGCACAAGAGGCTTTCTCTTGTCAA
GGATATTGTAGAGCGAAATTATGTTGACCTCGTGGGGCAAATTGTCAAGG
TCTATACCAACGACAGTGAAAAGGTCGTCCTCTATTTCACCGATTACACG
GCCAACGATGGTCTCGAAGACCGCCAAATAAACGATGCCGGTGACAATGA
CTTTGGCACTGAAGGAGATATCTACGGTTACCAAAAACGACCCAAGAAGA
AATGGACAGGACCAGTTGGACGGATGACCCTCACAATCACACTCTGGGAA
CCCCATGCATCCTATGCGCGCCAACATCTGAAGGATAACGATCTCATCCA
GCTATACAATGTGCATGTCAAGCGCAGTCGCATCAATGGGATATTAGAAG
CCAGTATCCACACAAACCGCACGAATCCAAATTCAGTCAATGTACACACC
CTGGATCGTCGCAAAGACACGTTTGTCGAACAATTTCTGCAGCGTAGGAC
GGAATACTGGAAAGCGAATCCTCGGAAGCGGGAACTCGAAAACGAAGGCC
AGCAGGTTTCGAAGAAAAGCACCAAGAAACAGCGAAAGAAAGCCGAAAAG
GTGGAAGAAGGCCAAGTTCCCATAACAGCAGCAAGCAGCAAGCGATATGC
GCCAAATGAAAACACAGGCAGCCCGTCCGTCCCTACAATGTCCCTGGAAG
CGATCCTTTCCAACAAACTTCATGACAACATCTCATATGACAACATACAG
TACCGCTTCCCCTTTCAAAACTTCTGCTACCGAACCACAGTCCGCGTGGT
CGATTTCTTCCCCCCACGACTGGAAGACTTCTCCGTCCCCGAAGACTCCT
CGGGTGAGGGTACCTCTCAAAGAGATCCCGATCGTTTCATTAGATGGGAA
TGGCGCTTCTGTCTGCTCGTGGAGAGCGTCCCTCCTCCACCCGCAGGTCA
AGCGAAAGAACAGATGAGGTTGTTTGTAGCTGGCCCAAATGCAGAGTATC
TATTAGGGCTGACTGCAGTTGAGTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000784	nuclear chromosome, telomeric region

Vocabulary: **Biological Process**
Term	Definition
GO:0000723	telomere maintenance

Vocabulary: **Molecular Function**
Term	Definition
GO:0043047	single-stranded telomeric DNA binding
GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_009665	CBS51388_009665	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_009665-T1.exon1	CBS51388_009665-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_009665-T1.exon2	CBS51388_009665-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_009665-T1.exon3	CBS51388_009665-T1.exon3	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_009665-T1.cds	CBS51388_009665-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_009665-T1	CBS51388_009665-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR012340
DBxref	InterPro:IPR032042
DBxref	InterPro:IPR011564
DBxref	PFAM:PF16686
DBxref	PFAM:PF02765
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An15	supercontig	An15:1515673..1517342 +

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CBS51388_009665-T1, CBS51388_009665-T1 (mRNA) Aspergillus niger CBS 513.88