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CBS51388_010030-T1, CBS51388_010030-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010030-T1
Unique NameCBS51388_010030-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:652452..653953+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010030-T1 ID=CBS51388_010030-T1|Name=CBS51388_010030-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1502bp|location=Sequence derived from alignment at An16:652452..653953+ (Aspergillus niger CBS 513.88)
ATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACCGTCAAAAAGGC
CATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTATCAGCTGTATT
ACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGGAGAAGAACCCC
AAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTACATGGATCGTGC
GGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCGAAAAAAGCCGA
GTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTGGGAAGGGAGGG
TATGTACATGTCTCCCGGCATCCGATCACTTTTGGCCCAGAGAGCATTGT
ATGCTAACACTCCTTGGTGAATTAGAAACCAGGACGAAGATGGCGAGGAC
GCCGACTCGAAGAAGCTACGGTCCGCCCTTGCTGGGGCGATCTTGTCGGA
TAAACCCAACGTGCAGTGGGAGGATGTTGCCGGTCTGGAGAGCGCAAAGG
AGGCATTGAAGGAAGCGGTCATTCTACCGATCAAGTTCCCACACCTCTTT
ACGGGGAAGCGCCAACCGTGGAAGGGTATCTTGCTGTATGGGCCCCCGGG
TACGGGAAAGTCATATCTCGCCAAGGCTGTTGCGACGGAGGCGAACAGCA
CATTCTTCAGTGTTAGTAGTAGTGACTTGGTGTCGAAGTGGATGGGTGAG
AGTGAAAGGTATGGATCAATCGGTGATCTTATGTTGCCACATGTCGGTTC
CCAGAGCTAACATGCCTCTACAGGCTTGTGAAGCAGCTCTTCAACATGGC
GCGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCGACGCTCTTT
GCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGTATCAAGACG
GAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAAGGGCGTTCT
GATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAGCCATTCGTC
GTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATCAACGCACGA
ATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGAGTTGACGCA
AGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACTCCGGTAGCG
ATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATCCGCAAGATC
CAAACAGCAACGCACTACAAGAAGGTAAGCCCTCCAGTCATGCATATTCC
TAGGGAAGACAACACTAACCACAAATCCAGGTCATCCTCGACGGTGCCGA
AAAGCTAACCCCCTGCTCACCGGGCGACCAAGGCGCAATGGAAATGTCAT
GGACCACCGTAGAAGCCGACCAACTCCTGGAACCCCCGCTCGTCCTGAAA
GACTTCATCAAGGCGGTTCGTAACTCCCGACCAACCGTCAGTCAAGAAGA
CCTGCAACGAAACTCCGAATGGACCAAGGAATTCGGCAGCGAGGGTGCTT
AA
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Coding sequence (CDS) from alignment at An16:652452..653953+

>CBS51388_010030-T1 ID=CBS51388_010030-T1|Name=CBS51388_010030-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5220bp|location=Sequence derived from alignment at An16:652452..653953+ (Aspergillus niger CBS 513.88)
ATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACCGTCAAAAAGGC
CATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTATCAGCTGTATT
ACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGGAGAAGAACCCC
AAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTACATGGATCGTGC
GGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCGAAAAAAGCCGA
GTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTGGGAAGGGAGGA
AACCAGGACGAAGATGGCGAGGACGCCGACTCGAAGAAGCTACGGTCCGC
CCTTGCTGGGGCGATCTTGTCGGATAAACCCAACGTGCAGTGGGAGGATG
TTGCCGGTCTGGAGAGCGCAAAGGAGGCATTGAAGGAAGCGGTCATTCTA
CCGATCAAGTTCCCACACCTCTTTACGGGGAAGCGCCAACCGTGGAAGGG
TATCTTGCTGTATGGGCCCCCGGGTACGGGAAAGTCATATCTCGCCAAGG
CTGTTGCGACGGAGGCGAACAGCACATTCTTCAGTGTTAGTAGTAGTGAC
TTGGTGTCGAAGTGGATGGGTGAGAGTGAAAGGCTTGTGAAGCAGCTCTT
CAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGAAGTCG
ACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTCGTCGT
ATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGACTCAAA
GGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGATGCAG
CCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCGATATC
AACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCCTGCGA
GTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGGCTACT
CCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGCCAATC
CGCAAGATCCAAACAGCAACGCACTACAAGAAGGTCATCCTCGACGGTGC
CGAAAAGCTAACCCCCTGCTCACCGGGCGACCAAGGCGCAATGGAAATGT
CATGGACCACCGTAGAAGCCGACCAACTCCTGGAACCCCCGCTCGTCCTG
AAAGACTTCATCAAGGCGGTTCGTAACTCCCGACCAACCGTCAGTCAAGA
AGACCTGCAACGAAACTCCGAATGGACCAAGGAATTCGGCAGCGAGGGTG
CTTAAATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACCGTCAAA
AAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTATCAGCT
GTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGGAGAAGA
ACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTACATGGAT
CGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCGAAAAAA
GCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTGGGAAGG
GAGGAAACCAGGACGAAGATGGCGAGGACGCCGACTCGAAGAAGCTACGG
TCCGCCCTTGCTGGGGCGATCTTGTCGGATAAACCCAACGTGCAGTGGGA
GGATGTTGCCGGTCTGGAGAGCGCAAAGGAGGCATTGAAGGAAGCGGTCA
TTCTACCGATCAAGTTCCCACACCTCTTTACGGGGAAGCGCCAACCGTGG
AAGGGTATCTTGCTGTATGGGCCCCCGGGTACGGGAAAGTCATATCTCGC
CAAGGCTGTTGCGACGGAGGCGAACAGCACATTCTTCAGTGTTAGTAGTA
GTGACTTGGTGTCGAAGTGGATGGGTGAGAGTGAAAGGCTTGTGAAGCAG
CTCTTCAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCATTGACGA
AGTCGACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGCATCTC
GTCGTATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGGCAAAGAC
TCAAAGGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGCAACTGGA
TGCAGCCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCTCCCCG
ATATCAACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCACGCCC
TGCGAGTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGAGCGAGGG
CTACTCCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTGATGCAGC
CAATCCGCAAGATCCAAACAGCAACGCACTACAAGAAGGTCATCCTCGAC
GGTGCCGAAAAGCTAACCCCCTGCTCACCGGGCGACCAAGGCGCAATGGA
AATGTCATGGACCACCGTAGAAGCCGACCAACTCCTGGAACCCCCGCTCG
TCCTGAAAGACTTCATCAAGGCGGTTCGTAACTCCCGACCAACCGTCAGT
CAAGAAGACCTGCAACGAAACTCCGAATGGACCAAGGAATTCGGCAGCGA
GGGTGCTTAAATGAGTAATACCGACTTCCTAGGGAGGGCGATTGACACCG
TCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAGGCTTAT
CAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAATGGGA
GAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGAGTACA
TGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGATAATCGA
AAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGAAGTGG
GAAGGGAGGAAACCAGGACGAAGATGGCGAGGACGCCGACTCGAAGAAGC
TACGGTCCGCCCTTGCTGGGGCGATCTTGTCGGATAAACCCAACGTGCAG
TGGGAGGATGTTGCCGGTCTGGAGAGCGCAAAGGAGGCATTGAAGGAAGC
GGTCATTCTACCGATCAAGTTCCCACACCTCTTTACGGGGAAGCGCCAAC
CGTGGAAGGGTATCTTGCTGTATGGGCCCCCGGGTACGGGAAAGTCATAT
CTCGCCAAGGCTGTTGCGACGGAGGCGAACAGCACATTCTTCAGTGTTAG
TAGTAGTGACTTGGTGTCGAAGTGGATGGGTGAGAGTGAAAGGCTTGTGA
AGCAGCTCTTCAACATGGCGCGAGAAAACAAGCCGGCGATTATCTTCATT
GACGAAGTCGACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCAGAGGC
ATCTCGTCGTATCAAGACGGAATTGCTCGTTCAGATGGACGGTGTTGGCA
AAGACTCAAAGGGCGTTCTGATCCTCGGCGCAACGAACATTCCCTGGCAA
CTGGATGCAGCCATTCGTCGTCGATTCCAGCGTCGAGTCCACATCAGTCT
CCCCGATATCAACGCACGAATGAAGATGTTCATGCTGGCTGTCGGCTCCA
CGCCCTGCGAGTTGACGCAAGCCGACTACCGAACCCTGGCAGAGATGAGC
GAGGGCTACTCCGGTAGCGATATTAGCATTGCTGTGCAGGATGCGCTGAT
GCAGCCAATCCGCAAGATCCAAACAGCAACGCACTACAAGAAGGTCATCC
TCGACGGTGCCGAAAAGCTAACCCCCTGCTCACCGGGCGACCAAGGCGCA
ATGGAAATGTCATGGACCACCGTAGAAGCCGACCAACTCCTGGAACCCCC
GCTCGTCCTGAAAGACTTCATCAAGGCGGTTCGTAACTCCCGACCAACCG
TCAGTCAAGAAGACCTGCAACGAAACTCCGAATGGACCAAGGAATTCGGC
AGCGAGGGTGCTTAAATGAGTAATACCGACTTCCTAGGGAGGGCGATTGA
CACCGTCAAAAAGGCCATCGAGCACGACAATGAGGGCGAATACGAGAAGG
CTTATCAGCTGTATTACTCGGCACTGGAGCTGTTCATGCTGGCACTGAAA
TGGGAGAAGAACCCCAAGTCCAAGGAGATGATCCGCGCAAAGGCCGGCGA
GTACATGGATCGTGCGGAGAAACTCAAGAATCACCTGGCTACTCTAGATA
ATCGAAAAAAGCCGAGTGCGGTGGGCGCTAACGGCAAGGTGGCGCAAGGA
AGTGGGAAGGGAGGAAACCAGGACGAAGATGGCGAGGACGCCGACTCGAA
GAAGCTACGGTCCGCCCTTGCTGGGGCGATCTTGTCGGATAAACCCAACG
TGCAGTGGGAGGATGTTGCCGGTCTGGAGAGCGCAAAGGAGGCATTGAAG
GAAGCGGTCATTCTACCGATCAAGTTCCCACACCTCTTTACGGGGAAGCG
CCAACCGTGGAAGGGTATCTTGCTGTATGGGCCCCCGGGTACGGGAAAGT
CATATCTCGCCAAGGCTGTTGCGACGGAGGCGAACAGCACATTCTTCAGT
GTTAGTAGTAGTGACTTGGTGTCGAAGTGGATGGGTGAGAGTGAAAGGCT
TGTGAAGCAGCTCTTCAACATGGCGCGAGAAAACAAGCCGGCGATTATCT
TCATTGACGAAGTCGACGCTCTTTGCGGCCCTCGTGGCGAAGGTGAATCA
GAGGCATCTCGTCGTATCAAGACGGAATTGCTCGTTCAGATGGACGGTGT
TGGCAAAGACTCAAAGGGCGTTCTGATCCTCGGCGCAACGAACATTCCCT
GGCAACTGGATGCAGCCATTCGTCGTCGATTCCAGCGTCGAGTCCACATC
AGTCTCCCCGATATCAACGCACGAATGAAGATGTTCATGCTGGCTGTCGG
CTCCACGCCCTGCGAGTTGACGCAAGCCGACTACCGAACCCTGGCAGAGA
TGAGCGAGGGCTACTCCGGTAGCGATATTAGCATTGCTGTGCAGGATGCG
CTGATGCAGCCAATCCGCAAGATCCAAACAGCAACGCACTACAAGAAGGT
CATCCTCGACGGTGCCGAAAAGCTAACCCCCTGCTCACCGGGCGACCAAG
GCGCAATGGAAATGTCATGGACCACCGTAGAAGCCGACCAACTCCTGGAA
CCCCCGCTCGTCCTGAAAGACTTCATCAAGGCGGTTCGTAACTCCCGACC
AACCGTCAGTCAAGAAGACCTGCAACGAAACTCCGAATGGACCAAGGAAT
TCGGCAGCGAGGGTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VPS4CBS51388_010030Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010030-T1.exon1CBS51388_010030-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010030-T1.exon2CBS51388_010030-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010030-T1.exon3CBS51388_010030-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010030-T1.exon4CBS51388_010030-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010030-T1.cdsCBS51388_010030-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010030-T1CBS51388_010030-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036181
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR015415
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR007330
DBxrefPFAM:PF09336
DBxrefPFAM:PF04212
DBxrefPFAM:PF00004
ProductVacuolar protein sorting-associated protein 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:652452..653953 +
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