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CBS51388_010097-T1, CBS51388_010097-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010097-T1
Unique NameCBS51388_010097-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:872167..874159-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010097-T1 ID=CBS51388_010097-T1|Name=CBS51388_010097-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1993bp|location=Sequence derived from alignment at An16:872167..874159- (Aspergillus niger CBS 513.88)
ATGACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAA
TGGTATGAAGCCATCTACAAAGTCTCCTTAGGTCTCCTTGTTTTCTCTTC
AACCCGCTCTGGATGTTACCCTTCTTGTCCACCTCTATCTTCGACACAAA
GATCGGGATGTTCCGCTGGATCGTCATGCGTCTGGATTGACCTTCCTGAG
TCACCGAGATTCCCCCTCCCCTCGGGAGATTGACGGCGGATTTTCCTTCA
TTTTGTTTCAATCTTCCTTGCTTGTATCACGGTAATCTCAGTGTTCCGGA
TACCGGGTTGGCAGCTTCGAACTCAAAAATCAAGTTGTCTCGGTTGTTTG
TTCCTTCAAGTCCATTCGCAGTAAGCTGACATTTTACTCACGGCGCCCCT
GTTGGGCGCCATTAGTGGGGTTTCTTTTACAGTGACCAAACAGGATATCG
AGGAGCATTTCAGCACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTC
ATGAATGGCTTCGGTTTCATTGAATATGAGGATGCGATGGATGCTAGAGA
TGTTGTACCCGGTAAGTCACCCTATTATGCGCCCTAGCTGTCGCGGGAGC
CTGCTAACGTAGGACGATTATCTAGCCTTCCGTATGTACCAACGCAAGCA
CCAGTTTGAAAGATCTTCATGGTTGACATAACCCCTCATGCAGACGGTAG
TGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTGCCCGTGGACCGCGCC
GCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCCAATATGCCTCGTCCG
CGTCGCACGATCTTTCGCATGATGGTTTCTGGACTCCCGGAAACAAGTTG
GCAGGTTAGCAGCCCAAGTCCCCTTTCTTCTGGATCCACCGGACGCCTTG
CATCTCGGCCGATTTGCGTTCCCTGATTCATTTTTGCCCTGTACTCCATT
CTATGTTCTTCCACCGACGGCCCAAGGGAATCCTGGCGACGATGATCAGC
TCCTCTTGATGTATGGGTCGTTCACCAACCAACTTTCGGACCCCACCTAA
CTGAAAGGAAGGCTGGATGGCTGCCTCCCATGATCGAACCCCAGCTCTGA
GTGCTGAGAACCGAGGCCGGACAACCCCGTCCAGAATGGAACGCCCCCGC
AGTCATTGAAGGATCCCTTCGCCTACTACCCTGCATTGCTTGGGTCCTTT
CCTGGCCTGTTTTTCCATCTTGTATTTTTCTACTTGCGGGCACCCGGACA
CATCGGATACCACTGTACCACTTTTGCACCTGGATATGGACTCACACCCT
GGGGTTATCTAGGATCTTAAAGACTTTGCACGTCAATCTGGCTTGGACGT
GGTTTACTCTGAAACTGGCCGTGAACTCGGCAGAGGGTGGGTTAATCCTT
CAACTTTCTATCCGGTCGGACAGGGCCCCATTGACACATGCTCCCAAGAT
TCGTGGAATTTGAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTG
GATGGACGTGAATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGTAAG
CAACTTTACTGGTACCTGTGATCTGAGTGGAACGAGAATTCTCATACCCT
TCCTAGATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCG
GTCTCGATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGC
GGTTCCCTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGC
TCCCCCATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACG
TCGTACTCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTC
CCTACGATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTAT
GACGACCCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACC
TCGGGGCGAGTACATGCCTTACGACCGCCGCGGATACTGGTAG
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Coding sequence (CDS) from alignment at An16:872167..874159-

>CBS51388_010097-T1 ID=CBS51388_010097-T1|Name=CBS51388_010097-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5400bp|location=Sequence derived from alignment at An16:872167..874159- (Aspergillus niger CBS 513.88)
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAATG
ATTCAAACTTACCCGGATGAACGTGCCATTCGTGACCCGTACCGGTCTCG
ATCCCCGCGTCGGAGCTACCCTCCCATGGATGAATATGACCGGCGGTTCC
CTGCGCCACGGGGATACAGCCCCCGGGCTCACTATCGGGAACGCTCCCCC
ATTCCAATCCGGAGGGACTATTATGACCGGGATGGATATGGACGTCGTAC
TCCCCCCCGCCCTCGGATGGAAGACTACCCTCCCCCGCGTCGTCCCTACG
ATGACCCGTACGATGTCCGCCCGCCACCACCACCTCGCCATTATGACGAC
CCCTACGCACCCCCTCGCCCTTATGGACGGCCTCGCAGTCCACCTCGGGG
CGAGTACATGCCTTACGACCGCCGCGGATACTGGTAGATTCGTGGAATTT
GAAACCGCCAACGACCTGAAGACGGCCATTGAGAAACTGGATGGACGTGA
ATTCAAAGGCTCCCGCGTCACTTGCATTGCCGATGATCTTAAAGACTTTG
CACGTCAATCTGGCTTGGACGTGGTTTACTCTGAAACTGGCCGTGAACTC
GGCAGAGGACGGTAGTGATTTCAAAGGCGAGCGCCTCACCGTGCAATTTG
CCCGTGGACCGCGCCGCAAGGAGAACTTCCCTGGCCCAATGGACCGTCCC
AATATGCCTCGTCCGCGTCGCACGATCTTTCGCATGATGGTTTCTGGACT
CCCGGAAACAAGTTGGCAGTGACCAAACAGGATATCGAGGAGCATTTCAG
CACCCATGGTTCCGGAAAGATTACAGAGATCAAGCTCATGAATGGCTTCG
GTTTCATTGAATATGAGGATGCGATGGATGCTAGAGATGTTGTACCCGAT
GACTGAAGTCTCGTCCACCCGACTCTATCTCGGGAACCTTCCCCGCAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010097CBS51388_010097Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010097-T1CBS51388_010097-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010097-T1.cdsCBS51388_010097-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010097-T1.exon6CBS51388_010097-T1.exon6Aspergillus niger CBS 513.88exon
CBS51388_010097-T1.exon5CBS51388_010097-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_010097-T1.exon4CBS51388_010097-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_010097-T1.exon3CBS51388_010097-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010097-T1.exon2CBS51388_010097-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010097-T1.exon1CBS51388_010097-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:872167..874159 -
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