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CBS51388_010169-T1, CBS51388_010169-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010169-T1
Unique NameCBS51388_010169-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1083039..1084167+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010169-T1 ID=CBS51388_010169-T1|Name=CBS51388_010169-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1129bp|location=Sequence derived from alignment at An16:1083039..1084167+ (Aspergillus niger CBS 513.88)
ATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGG
GGCTGAGATCCCTGCTCTCGGACTCGGTATGATACATCTTCAGATAGTAG
CCACAAGGACATTCTGGCTAACGTCTGTGCAGGAACCTGGCAGTCAGGCC
CTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATACAGA
CACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGG
TATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTG
TCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGCTCTG
GACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACCTGGT
CCACTGGCCGGTGGCTATGAACCCTAATGGTGAGTCCTCCACTAATTCAG
ACTCAAGGCGATGCGCATGTTGACACTACAAAGGAAACCACCCCAATATT
CCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATAT
CAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGG
CCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCC
CAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGTCT
TCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCA
CGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACGGCAGAG
CCCATTGTCGAGGTTGCGAAAAAGAAGGGTGTCGACCCAGCCACGGTCCT
GCTGAGCTGGCACAGTACGTATCTTCCATGCCGAATAATGCGAGAATTAT
CACTAACTGCATCCTCCGTATAGTCAGCCGTGGCTCTTCTGTCCTTGCCA
AGTCCGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCCTTG
GATGATGCTGACATGGCTACCATTGCCAAATACACGAATGACCTGGCCTC
GAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTTG
GATTCCCGGACAAGATCGGCCGCGTATAA
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Coding sequence (CDS) from alignment at An16:1083039..1084167+

>CBS51388_010169-T1 ID=CBS51388_010169-T1|Name=CBS51388_010169-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3840bp|location=Sequence derived from alignment at An16:1083039..1084167+ (Aspergillus niger CBS 513.88)
ATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGG
GGCTGAGATCCCTGCTCTCGGACTCGGAACCTGGCAGTCAGGCCCTGGAG
AGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATACAGACACATT
GATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGGTATCAA
GGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTGTCACAA
CTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGCTCTGGACCAG
AGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACCTGGTCCACTG
GCCGGTGGCTATGAACCCTAATGGAAACCACCCCAATATTCCCACCCTTC
CCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACTTGG
AAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGGTGT
TTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCACCG
TGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGTCTTCCCCAGCAG
GAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATACAG
CCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACGGCAGAGCCCATTGTCG
AGGTTGCGAAAAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGCTGG
CACATCAGCCGTGGCTCTTCTGTCCTTGCCAAGTCCGTGAACCCCTCTCG
GATTGAGGGCAACCGCAACCTGGTGGCCTTGGATGATGCTGACATGGCTA
CCATTGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTTCAGCGT
TTTGTTTTCCCTCCTTTCAAGCTTGACTTTGGATTCCCGGACAAGATCGG
CCGCGTATAAATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGC
TGAACACCGGGGCTGAGATCCCTGCTCTCGGACTCGGAACCTGGCAGTCA
GGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATA
CAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCA
AGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTC
TTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGC
TCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACC
TGGTCCACTGGCCGGTGGCTATGAACCCTAATGGAAACCACCCCAATATT
CCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATAT
CAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGG
CCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCC
CAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGTCT
TCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCA
CGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACGGCAGAG
CCCATTGTCGAGGTTGCGAAAAAGAAGGGTGTCGACCCAGCCACGGTCCT
GCTGAGCTGGCACATCAGCCGTGGCTCTTCTGTCCTTGCCAAGTCCGTGA
ACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCCTTGGATGATGCT
GACATGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAAGAACGC
CTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTTGGATTCCCGG
ACAAGATCGGCCGCGTATAAATGGGTTCGACTTCGACCGTCGCAGACACC
CGCTTCAAGCTGAACACCGGGGCTGAGATCCCTGCTCTCGGACTCGGAAC
CTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCT
CCGTTGGATACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGGA
GAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCG
AGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGAG
TGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTT
GATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCTAATGGAAACCA
CCCCAATATTCCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACC
ACTCCCATATCAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGA
AAGACCAAGGCCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGA
GCTCCTCGCCCAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACC
ACCCCTGTCTTCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGC
ATTCACATCACGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCT
GACGGCAGAGCCCATTGTCGAGGTTGCGAAAAAGAAGGGTGTCGACCCAG
CCACGGTCCTGCTGAGCTGGCACATCAGCCGTGGCTCTTCTGTCCTTGCC
AAGTCCGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCCTT
GGATGATGCTGACATGGCTACCATTGCCAAATACACGAATGACCTGGCCT
CGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTT
GGATTCCCGGACAAGATCGGCCGCGTATAAATGGGTTCGACTTCGACCGT
CGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGAGATCCCTGCTCTCG
GACTCGGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGCA
CATGCCATCTCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACGG
AAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGAG
TTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATGG
CACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGCT
GGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCTA
ATGGAAACCACCCCAATATTCCCACCCTTCCCGACGGTTCCCGCGACCTG
CACCTCAACCACTCCCATATCAACACTTGGAAGGATATGGAGAAGCTTGT
CGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAACTACAGCAGGCCCT
ACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCCGGCTGTCAACCAG
ATTGAGAACCACCCCTGTCTTCCCCAGCAGGAGGCGGTCGACTTCTGCAA
GGAGAAGGGCATTCACATCACGGCATACAGCCCTCTCGGCAGCACGGGCA
GTCCGCTGCTGACGGCAGAGCCCATTGTCGAGGTTGCGAAAAAGAAGGGT
GTCGACCCAGCCACGGTCCTGCTGAGCTGGCACATCAGCCGTGGCTCTTC
TGTCCTTGCCAAGTCCGTGAACCCCTCTCGGATTGAGGGCAACCGCAACC
TGGTGGCCTTGGATGATGCTGACATGGCTACCATTGCCAAATACACGAAT
GACCTGGCCTCGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAA
GCTTGACTTTGGATTCCCGGACAAGATCGGCCGCGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GAR1CBS51388_010169Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010169-T1.exon1CBS51388_010169-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010169-T1.exon2CBS51388_010169-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010169-T1.exon3CBS51388_010169-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010169-T1.exon4CBS51388_010169-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010169-T1.cdsCBS51388_010169-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010169-T1CBS51388_010169-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
ProductH/ACA snoRNP pseudouridylase subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1083039..1084167 +
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