You are here

Home

CBS51388_010211-T1, CBS51388_010211-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010211-T1
Unique NameCBS51388_010211-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1218699..1220417+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010211-T1 ID=CBS51388_010211-T1|Name=CBS51388_010211-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1719bp|location=Sequence derived from alignment at An16:1218699..1220417+ (Aspergillus niger CBS 513.88)
ATGCCCAGCTTCTCGCAGGCCACCGAACTCTCCGCCTGGAAGGAGCTCCA
GGAGCACCACAACTCCGTCGGACGCAACATTGTCCTCAAGGACTGTTTCC
AGAAGGACCCCCAGCGCTTCGAGAAGTTCAGCCGCACCTTCAAGAACACC
GTCGACAACTCCGAGGTCCTCTTCGACTTCTCCAAGAACTTCCTCACCGA
GGAGACTCTGGCTCTGCTGGTCAAGCTGGCCAAGGAAGCCAATGTCGAGG
AGCTCCGTGATGCCATGTTCAAGGGTGAGCACATCAACTTCACCGAAGAC
CGTGCCGTCTACCACGCCGCCCTGCGCAATGTCTCCAACGAGCCCATGCA
GGTCAACGGAAAGAGCGTCGTTGAGGACGTCAACGCCGTTCTGGAGCACA
TGAAGGAGTTCACTGAGCAGGTGCGCAGTGGTGAGTGGAAGGGTTACACT
GGCAAGAAGATCGACACCGTCATCAACATCGGTATCGGTGGTTCCGACCT
GTAAGTCGGTCAATTGACGCTATCAAAGTCGAATGCCGTTACTAACCTCA
CAACTAGTGGCCCCGTCATGGTGACCGAGGCTCTGAAGCCCTACGGTGCC
CCCGACATGAAGCTGCACTTCGTCTCCAACATTGATGGCACCCACATCGC
TGAGGCCCTCAAGAACTCCAACCCCGAGACCACTCTCTTCCTGATCGCTT
CCAAGACCTTCACCACCGCAGAGACCACCACCAACGCCAACACGGCGAAG
AAGTGGTTCCTCGAGACTGCCAAGGAGGACTCTCACATTGCCAAGCACTT
CGTGGCCCTGTCCACCAACGAGGAGGAGGTCACCAAGTTCGGCATTGACA
AGAAGAACATGTTCGGTTTCGAGTCCTGGGTGGGTGGTCGTTACTCCGTC
TGGAGCGCCATCGGCCTGTCCGTCGCTCTGTACATCGGTTACGACAACTT
CCACCAGTTCTTGGCCGGTGCTCACGCCATGGACAAGCACTTCCGTGAGG
CTCCTCTGGAGCAGAACATTCCCGTCCTCGGTGGTCTGCTGAGCGTGTGG
TACAGCGACTTTTTCGGTGCCCAGACCCACCTGGTGGCCCCCTTCGACCA
GTACCTGCACCGTTTCCCTGCCTACCTGCAGCAGCTCTCCATGGAGAGTA
ACGGCAAGGCCATCACCCGCACCGGCGAGTATGTCAAGTACACCACCGGC
CCCATCCTCTTCGGTGAGCCCGCCACCAACGCCCAGCACAGCTTCTTCCA
GCTGTTGCACCAGGGTACCAAGCTCATCCCCTCCGACTTCATCATGGCCG
CCGAGTCGCACAACCCCGTTGAGGGTGGCAAGCACCAGCGCATGCTGGCT
TCCAACTTCCTGGCCCAGTCTGAAGCTCTGATGGTCGGAAAGACCCCTGA
GCAGGTCAAGGCCGAGGGTGCCCCTGAGAACCTGGTCTCTCACAAGACCT
TCCTGGGCAACCGCCCGACGACCTCCATCCTGGCCCAGAAGATCACCCCC
TCCACTCTGGGAGCTTTGATTACCTACTACGAGCACCTCACCTTCACCGA
GGGTGCCATCTGGAACATCAACTCCTTCGACCAGTGGGGTGTGGAGCTGG
GCAAGGTGCTTGCCAAGAAGATCCAGAAGGAGTTGGAGACCGCGGATGCC
GGCTCGGACCACGATGCGTCGACCAGCGGTCTGCTGCTTGCCTTCAAGAA
GAAGGCCAACCTGGCGTAA
back to top

Coding sequence (CDS) from alignment at An16:1218699..1220417+

>CBS51388_010211-T1 ID=CBS51388_010211-T1|Name=CBS51388_010211-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3324bp|location=Sequence derived from alignment at An16:1218699..1220417+ (Aspergillus niger CBS 513.88)
ATGCCCAGCTTCTCGCAGGCCACCGAACTCTCCGCCTGGAAGGAGCTCCA
GGAGCACCACAACTCCGTCGGACGCAACATTGTCCTCAAGGACTGTTTCC
AGAAGGACCCCCAGCGCTTCGAGAAGTTCAGCCGCACCTTCAAGAACACC
GTCGACAACTCCGAGGTCCTCTTCGACTTCTCCAAGAACTTCCTCACCGA
GGAGACTCTGGCTCTGCTGGTCAAGCTGGCCAAGGAAGCCAATGTCGAGG
AGCTCCGTGATGCCATGTTCAAGGGTGAGCACATCAACTTCACCGAAGAC
CGTGCCGTCTACCACGCCGCCCTGCGCAATGTCTCCAACGAGCCCATGCA
GGTCAACGGAAAGAGCGTCGTTGAGGACGTCAACGCCGTTCTGGAGCACA
TGAAGGAGTTCACTGAGCAGGTGCGCAGTGGTGAGTGGAAGGGTTACACT
GGCAAGAAGATCGACACCGTCATCAACATCGGTATCGGTGGTTCCGACCT
TGGCCCCGTCATGGTGACCGAGGCTCTGAAGCCCTACGGTGCCCCCGACA
TGAAGCTGCACTTCGTCTCCAACATTGATGGCACCCACATCGCTGAGGCC
CTCAAGAACTCCAACCCCGAGACCACTCTCTTCCTGATCGCTTCCAAGAC
CTTCACCACCGCAGAGACCACCACCAACGCCAACACGGCGAAGAAGTGGT
TCCTCGAGACTGCCAAGGAGGACTCTCACATTGCCAAGCACTTCGTGGCC
CTGTCCACCAACGAGGAGGAGGTCACCAAGTTCGGCATTGACAAGAAGAA
CATGTTCGGTTTCGAGTCCTGGGTGGGTGGTCGTTACTCCGTCTGGAGCG
CCATCGGCCTGTCCGTCGCTCTGTACATCGGTTACGACAACTTCCACCAG
TTCTTGGCCGGTGCTCACGCCATGGACAAGCACTTCCGTGAGGCTCCTCT
GGAGCAGAACATTCCCGTCCTCGGTGGTCTGCTGAGCGTGTGGTACAGCG
ACTTTTTCGGTGCCCAGACCCACCTGGTGGCCCCCTTCGACCAGTACCTG
CACCGTTTCCCTGCCTACCTGCAGCAGCTCTCCATGGAGAGTAACGGCAA
GGCCATCACCCGCACCGGCGAGTATGTCAAGTACACCACCGGCCCCATCC
TCTTCGGTGAGCCCGCCACCAACGCCCAGCACAGCTTCTTCCAGCTGTTG
CACCAGGGTACCAAGCTCATCCCCTCCGACTTCATCATGGCCGCCGAGTC
GCACAACCCCGTTGAGGGTGGCAAGCACCAGCGCATGCTGGCTTCCAACT
TCCTGGCCCAGTCTGAAGCTCTGATGGTCGGAAAGACCCCTGAGCAGGTC
AAGGCCGAGGGTGCCCCTGAGAACCTGGTCTCTCACAAGACCTTCCTGGG
CAACCGCCCGACGACCTCCATCCTGGCCCAGAAGATCACCCCCTCCACTC
TGGGAGCTTTGATTACCTACTACGAGCACCTCACCTTCACCGAGGGTGCC
ATCTGGAACATCAACTCCTTCGACCAGTGGGGTGTGGAGCTGGGCAAGGT
GCTTGCCAAGAAGATCCAGAAGGAGTTGGAGACCGCGGATGCCGGCTCGG
ACCACGATGCGTCGACCAGCGGTCTGCTGCTTGCCTTCAAGAAGAAGGCC
AACCTGGCGTAAATGCCCAGCTTCTCGCAGGCCACCGAACTCTCCGCCTG
GAAGGAGCTCCAGGAGCACCACAACTCCGTCGGACGCAACATTGTCCTCA
AGGACTGTTTCCAGAAGGACCCCCAGCGCTTCGAGAAGTTCAGCCGCACC
TTCAAGAACACCGTCGACAACTCCGAGGTCCTCTTCGACTTCTCCAAGAA
CTTCCTCACCGAGGAGACTCTGGCTCTGCTGGTCAAGCTGGCCAAGGAAG
CCAATGTCGAGGAGCTCCGTGATGCCATGTTCAAGGGTGAGCACATCAAC
TTCACCGAAGACCGTGCCGTCTACCACGCCGCCCTGCGCAATGTCTCCAA
CGAGCCCATGCAGGTCAACGGAAAGAGCGTCGTTGAGGACGTCAACGCCG
TTCTGGAGCACATGAAGGAGTTCACTGAGCAGGTGCGCAGTGGTGAGTGG
AAGGGTTACACTGGCAAGAAGATCGACACCGTCATCAACATCGGTATCGG
TGGTTCCGACCTTGGCCCCGTCATGGTGACCGAGGCTCTGAAGCCCTACG
GTGCCCCCGACATGAAGCTGCACTTCGTCTCCAACATTGATGGCACCCAC
ATCGCTGAGGCCCTCAAGAACTCCAACCCCGAGACCACTCTCTTCCTGAT
CGCTTCCAAGACCTTCACCACCGCAGAGACCACCACCAACGCCAACACGG
CGAAGAAGTGGTTCCTCGAGACTGCCAAGGAGGACTCTCACATTGCCAAG
CACTTCGTGGCCCTGTCCACCAACGAGGAGGAGGTCACCAAGTTCGGCAT
TGACAAGAAGAACATGTTCGGTTTCGAGTCCTGGGTGGGTGGTCGTTACT
CCGTCTGGAGCGCCATCGGCCTGTCCGTCGCTCTGTACATCGGTTACGAC
AACTTCCACCAGTTCTTGGCCGGTGCTCACGCCATGGACAAGCACTTCCG
TGAGGCTCCTCTGGAGCAGAACATTCCCGTCCTCGGTGGTCTGCTGAGCG
TGTGGTACAGCGACTTTTTCGGTGCCCAGACCCACCTGGTGGCCCCCTTC
GACCAGTACCTGCACCGTTTCCCTGCCTACCTGCAGCAGCTCTCCATGGA
GAGTAACGGCAAGGCCATCACCCGCACCGGCGAGTATGTCAAGTACACCA
CCGGCCCCATCCTCTTCGGTGAGCCCGCCACCAACGCCCAGCACAGCTTC
TTCCAGCTGTTGCACCAGGGTACCAAGCTCATCCCCTCCGACTTCATCAT
GGCCGCCGAGTCGCACAACCCCGTTGAGGGTGGCAAGCACCAGCGCATGC
TGGCTTCCAACTTCCTGGCCCAGTCTGAAGCTCTGATGGTCGGAAAGACC
CCTGAGCAGGTCAAGGCCGAGGGTGCCCCTGAGAACCTGGTCTCTCACAA
GACCTTCCTGGGCAACCGCCCGACGACCTCCATCCTGGCCCAGAAGATCA
CCCCCTCCACTCTGGGAGCTTTGATTACCTACTACGAGCACCTCACCTTC
ACCGAGGGTGCCATCTGGAACATCAACTCCTTCGACCAGTGGGGTGTGGA
GCTGGGCAAGGTGCTTGCCAAGAAGATCCAGAAGGAGTTGGAGACCGCGG
ATGCCGGCTCGGACCACGATGCGTCGACCAGCGGTCTGCTGCTTGCCTTC
AAGAAGAAGGCCAACCTGGCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006094gluconeogenesis
GO:0006096glycolytic process
Vocabulary: Molecular Function
TermDefinition
GO:0004347glucose-6-phosphate isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010211CBS51388_010211Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010211-T1.exon1CBS51388_010211-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010211-T1.exon2CBS51388_010211-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010211-T1.cdsCBS51388_010211-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010211-T1CBS51388_010211-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261RWJ
DBxrefInterPro:IPR035482
DBxrefInterPro:IPR035476
DBxrefInterPro:IPR018189
DBxrefInterPro:IPR023096
DBxrefInterPro:IPR001672
DBxrefPFAM:PF00342
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1218699..1220417 +
Powered by Drupal