You are here

Home

CBS51388_010306-T1, CBS51388_010306-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010306-T1
Unique NameCBS51388_010306-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1516565..1518268+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010306-T1 ID=CBS51388_010306-T1|Name=CBS51388_010306-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1704bp|location=Sequence derived from alignment at An16:1516565..1518268+ (Aspergillus niger CBS 513.88)
ATGGATCTTTTTCACTCGGCAGGGTTTGCGTCAGATGTGACAGAGTTGAT
GAAGCAGCAGCATGTCCCGGGGCTGGCCATTGCAATCATACACAATGATC
AAATTGCCTCTGCGGGATATGGACATGCGAGCCTGGATCCCGAAATACCT
TGTACAGCAGATACGCTGTTTGACATTGCATCGTCTGCTAAATCACTCAC
TGCTGCGGCGGTGGGATTGCTAGTCGACGATAACGACATGTTCCCGGATA
TTCAGTACGATGCCGTAATGTCGACTCTTCTCCCCGAGGACTTTGTTATG
TCTGGCAAAGGATACACAGAAGGAGTCACCGTGGAAGACATCTTAAGTCA
TAGAAGTGGAATGCCTGGGTGAGCTAATATTTTTTTCAAATTCCATGTTT
GACTTCAAGACTAATCATATTGCGCCAGCCATGACGATTCGTATATGAGT
GTGCGAGCGGCGAAGCCGGACAATGCTCGATCCATTACGAGAAACCTCAG
GAATCTCCCTGTCGCGGCCCCCATTCGATCAAAGTATATTTACTGCAACA
TGATGTATACAGTGGCAACCCACCTTGTGGAAGTCAAGAGCGGACAGGAT
TTTGGTACATTCCTCGAAGACCGATTTTTCAAGCCTCTGGACATGGCATC
AACTACTCTTCAACCCAGCAGCGCACGCTCAAAAGGATTTGGATCCCGCA
TGGCAACTGGCTACACATGGAAAAGGGCCGACTCAACATATCGTGGGTTA
GAAAGTCCCGACTGCCCAGAAGGCCAAGGCGCCGGGTCTATCATTTCGAG
CGTGAACGACTTCATCAAATTTGTCAAGGCTTTCATGAATCGCGAAGACC
CTATCAATAAAAATGTTTATGAAGGGCTTACTCGCCTGCGAACTTTTGTG
AATCCAAACCCCGGACGACGGAAGCGGTACAGCTCACCGGTAGCATATGC
GGCTGGCCTGGATGTCTACTTTTACAAGGGACATATGGTTGTCGGCCATA
ATGGGGCATTCTCTGGATTCGCCAGTCGCTTCTTCTTCCTCCCTGATTTC
TCATTCGGTGCGGTGATCATGGGAAACTCAGATGGGGCAAATGGCATTGC
GACGACCCTGGTCCAAAAGCTAATTGACAATGTCCTTGGAGTCACGGACG
AAAAACCTCAGGACAGCAAAAGCAAAGACACCCGATCTGTTGAAATCCGC
GGTCCCAAACCCCAGGCCGAGGCGAAAGACGCAAATCCAATGAGTAAGAA
TCAGGAAAAGAAGGAGAAGAAAAAGCAGGAAAAGAAATCCCAAGCGAAGA
AAAGTCAAGGTATCCAGAAGGGCCAAGTGAATGAGCAAAAACCAAACCGG
AATACTCCGCAGCCACCGACTCTACCCCTCAGTGCTTACGCTGGCAACTA
CTGGAATCCTGGGTATCATAACTTACAGGTTCAAATCAGAGATGATGCGC
TCTTCATCGATGCTACAGATCGCTCAATGGGGTTTACCTTGAAGTTCGAA
CATGTGTCCGATGACCGAAAATTCAATGCTCATCTGACTGATTGGCTCGA
TGGCAGTGACGACATCGTCAAAGCGGAGTTTGTGATAGAAGATGATCAAG
TCACAAGGTTGGGTCTGCAGTTGGAGGAAATGCTCCAAGAAATGATCTGG
TTCGAGAAGAAGGATGGAGTGCGCAGCGGTGCGGCCAGGGTGTTGGTGCC
TTGA
back to top

Coding sequence (CDS) from alignment at An16:1516565..1518268+

>CBS51388_010306-T1 ID=CBS51388_010306-T1|Name=CBS51388_010306-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3288bp|location=Sequence derived from alignment at An16:1516565..1518268+ (Aspergillus niger CBS 513.88)
ATGGATCTTTTTCACTCGGCAGGGTTTGCGTCAGATGTGACAGAGTTGAT
GAAGCAGCAGCATGTCCCGGGGCTGGCCATTGCAATCATACACAATGATC
AAATTGCCTCTGCGGGATATGGACATGCGAGCCTGGATCCCGAAATACCT
TGTACAGCAGATACGCTGTTTGACATTGCATCGTCTGCTAAATCACTCAC
TGCTGCGGCGGTGGGATTGCTAGTCGACGATAACGACATGTTCCCGGATA
TTCAGTACGATGCCGTAATGTCGACTCTTCTCCCCGAGGACTTTGTTATG
TCTGGCAAAGGATACACAGAAGGAGTCACCGTGGAAGACATCTTAAGTCA
TAGAAGTGGAATGCCTGGCCATGACGATTCGTATATGAGTGTGCGAGCGG
CGAAGCCGGACAATGCTCGATCCATTACGAGAAACCTCAGGAATCTCCCT
GTCGCGGCCCCCATTCGATCAAAGTATATTTACTGCAACATGATGTATAC
AGTGGCAACCCACCTTGTGGAAGTCAAGAGCGGACAGGATTTTGGTACAT
TCCTCGAAGACCGATTTTTCAAGCCTCTGGACATGGCATCAACTACTCTT
CAACCCAGCAGCGCACGCTCAAAAGGATTTGGATCCCGCATGGCAACTGG
CTACACATGGAAAAGGGCCGACTCAACATATCGTGGGTTAGAAAGTCCCG
ACTGCCCAGAAGGCCAAGGCGCCGGGTCTATCATTTCGAGCGTGAACGAC
TTCATCAAATTTGTCAAGGCTTTCATGAATCGCGAAGACCCTATCAATAA
AAATGTTTATGAAGGGCTTACTCGCCTGCGAACTTTTGTGAATCCAAACC
CCGGACGACGGAAGCGGTACAGCTCACCGGTAGCATATGCGGCTGGCCTG
GATGTCTACTTTTACAAGGGACATATGGTTGTCGGCCATAATGGGGCATT
CTCTGGATTCGCCAGTCGCTTCTTCTTCCTCCCTGATTTCTCATTCGGTG
CGGTGATCATGGGAAACTCAGATGGGGCAAATGGCATTGCGACGACCCTG
GTCCAAAAGCTAATTGACAATGTCCTTGGAGTCACGGACGAAAAACCTCA
GGACAGCAAAAGCAAAGACACCCGATCTGTTGAAATCCGCGGTCCCAAAC
CCCAGGCCGAGGCGAAAGACGCAAATCCAATGAGTAAGAATCAGGAAAAG
AAGGAGAAGAAAAAGCAGGAAAAGAAATCCCAAGCGAAGAAAAGTCAAGG
TATCCAGAAGGGCCAAGTGAATGAGCAAAAACCAAACCGGAATACTCCGC
AGCCACCGACTCTACCCCTCAGTGCTTACGCTGGCAACTACTGGAATCCT
GGGTATCATAACTTACAGGTTCAAATCAGAGATGATGCGCTCTTCATCGA
TGCTACAGATCGCTCAATGGGGTTTACCTTGAAGTTCGAACATGTGTCCG
ATGACCGAAAATTCAATGCTCATCTGACTGATTGGCTCGATGGCAGTGAC
GACATCGTCAAAGCGGAGTTTGTGATAGAAGATGATCAAGTCACAAGGTT
GGGTCTGCAGTTGGAGGAAATGCTCCAAGAAATGATCTGGTTCGAGAAGA
AGGATGGAGTGCGCAGCGGTGCGGCCAGGGTGTTGGTGCCTTGAATGGAT
CTTTTTCACTCGGCAGGGTTTGCGTCAGATGTGACAGAGTTGATGAAGCA
GCAGCATGTCCCGGGGCTGGCCATTGCAATCATACACAATGATCAAATTG
CCTCTGCGGGATATGGACATGCGAGCCTGGATCCCGAAATACCTTGTACA
GCAGATACGCTGTTTGACATTGCATCGTCTGCTAAATCACTCACTGCTGC
GGCGGTGGGATTGCTAGTCGACGATAACGACATGTTCCCGGATATTCAGT
ACGATGCCGTAATGTCGACTCTTCTCCCCGAGGACTTTGTTATGTCTGGC
AAAGGATACACAGAAGGAGTCACCGTGGAAGACATCTTAAGTCATAGAAG
TGGAATGCCTGGCCATGACGATTCGTATATGAGTGTGCGAGCGGCGAAGC
CGGACAATGCTCGATCCATTACGAGAAACCTCAGGAATCTCCCTGTCGCG
GCCCCCATTCGATCAAAGTATATTTACTGCAACATGATGTATACAGTGGC
AACCCACCTTGTGGAAGTCAAGAGCGGACAGGATTTTGGTACATTCCTCG
AAGACCGATTTTTCAAGCCTCTGGACATGGCATCAACTACTCTTCAACCC
AGCAGCGCACGCTCAAAAGGATTTGGATCCCGCATGGCAACTGGCTACAC
ATGGAAAAGGGCCGACTCAACATATCGTGGGTTAGAAAGTCCCGACTGCC
CAGAAGGCCAAGGCGCCGGGTCTATCATTTCGAGCGTGAACGACTTCATC
AAATTTGTCAAGGCTTTCATGAATCGCGAAGACCCTATCAATAAAAATGT
TTATGAAGGGCTTACTCGCCTGCGAACTTTTGTGAATCCAAACCCCGGAC
GACGGAAGCGGTACAGCTCACCGGTAGCATATGCGGCTGGCCTGGATGTC
TACTTTTACAAGGGACATATGGTTGTCGGCCATAATGGGGCATTCTCTGG
ATTCGCCAGTCGCTTCTTCTTCCTCCCTGATTTCTCATTCGGTGCGGTGA
TCATGGGAAACTCAGATGGGGCAAATGGCATTGCGACGACCCTGGTCCAA
AAGCTAATTGACAATGTCCTTGGAGTCACGGACGAAAAACCTCAGGACAG
CAAAAGCAAAGACACCCGATCTGTTGAAATCCGCGGTCCCAAACCCCAGG
CCGAGGCGAAAGACGCAAATCCAATGAGTAAGAATCAGGAAAAGAAGGAG
AAGAAAAAGCAGGAAAAGAAATCCCAAGCGAAGAAAAGTCAAGGTATCCA
GAAGGGCCAAGTGAATGAGCAAAAACCAAACCGGAATACTCCGCAGCCAC
CGACTCTACCCCTCAGTGCTTACGCTGGCAACTACTGGAATCCTGGGTAT
CATAACTTACAGGTTCAAATCAGAGATGATGCGCTCTTCATCGATGCTAC
AGATCGCTCAATGGGGTTTACCTTGAAGTTCGAACATGTGTCCGATGACC
GAAAATTCAATGCTCATCTGACTGATTGGCTCGATGGCAGTGACGACATC
GTCAAAGCGGAGTTTGTGATAGAAGATGATCAAGTCACAAGGTTGGGTCT
GCAGTTGGAGGAAATGCTCCAAGAAATGATCTGGTTCGAGAAGAAGGATG
GAGTGCGCAGCGGTGCGGCCAGGGTGTTGGTGCCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010306CBS51388_010306Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010306-T1.exon1CBS51388_010306-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010306-T1.exon2CBS51388_010306-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010306-T1.cdsCBS51388_010306-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010306-T1CBS51388_010306-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_16.3
NoteMEROPS:MER0026262
NoteSMCOG1053:beta-lactamase
DBxrefInterPro:IPR012338
DBxrefInterPro:IPR021860
DBxrefInterPro:IPR001466
DBxrefPFAM:PF11954
DBxrefPFAM:PF00144
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1516565..1518268 +
Powered by Drupal