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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1533575..1534631- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010312-T1 ID=CBS51388_010312-T1|Name=CBS51388_010312-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1057bp|location=Sequence derived from alignment at An16:1533575..1534631- (Aspergillus niger CBS 513.88)
ATGTGTATCGCGCTTCTATCCACCGCACATCCTTCCTATCCCTTGATCAT
CATCAACAACAGGGATGTACGCGACAATGATTCAAACCACATGCTCGGAT
CCGTCCAAAACTAACGGCGTCTAGGAATACATACGTCGACCGACATCTCC
CGCTGACTGGTGGCCTTCACCAGGGTCCAATATCTTAGGTGGCCGTGATC
TAGCGCGAGAGCCACATGGAACATGGATGGGAGTGACCAGAGAAGGCAAA
GTGGCAGTCTTGACCAACTACCGCGAGAATACATCAGAACAAGCTATTGG
GGCGAAGAGCCGGGGGGCCATTGTATGTAGCTGGCTTGCTGCGCCTTCTG
ACGAGAAGCGGTCAACCCGGGAATATGTGCAGGATATGGTTGCGAGTCCC
ACCGCCAGGAATGTCGGTGGGTTCAGCCTGCTTTGTGGATACATCAACGA
GCCCCTGGCAATCGTCTCCAATCGCTCATCCACCATGGACCAAATTGCAT
GGGTTGCCACAAAACCTGATCAGACTTTGGGTCTCAGTAACACAGTTTTC
GAGGATCGGTCATGGCCTAAGATTCTTGACGGCGAAAGACTGATGAATGA
AGCCATTGCTACGCACGTGCAGGCTGGGGAGGACGAAGATGCTCTTATTA
CCCGATTCCTTGATATGCTGAGCACCAATACACTCCCGAAGCTCTCAGAA
GATGCCACTGCGGAGGACTACCTTCCGTATTTTCGAAAGAGCATCTTCAT
TCCTATCCTGGGTGCTCGCGAGAAACCCGCGAAGCCGGCAGATACAGTAG
CTCCTGTGTGCGTTGATGGTAAGCAGGCAAATGGGGCTGCGGGAGGGGAG
CACCATGCAATGGATCTCTCATTCCTGCATGGTGCATATGGGACTCAACA
ACAAACGGTAGTACTGGTAAGCGGCGATGGACGTGTGCGATATTTCGAAC
GCACATTATATGACAACGATGCAAACGCGATCCCGATCGGCCAGGGTGAT
CGATCATTCGAATTTCACGTCGGTCAACACTGCAACGAAGCCGACAGAAC
TTCATGA back to topCoding sequence (CDS) from alignment at An16:1533575..1534631- >CBS51388_010312-T1 ID=CBS51388_010312-T1|Name=CBS51388_010312-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1998bp|location=Sequence derived from alignment at An16:1533575..1534631- (Aspergillus niger CBS 513.88)
GAATACATACGTCGACCGACATCTCCCGCTGACTGGTGGCCTTCACCAGG
GTCCAATATCTTAGGTGGCCGTGATCTAGCGCGAGAGCCACATGGAACAT
GGATGGGAGTGACCAGAGAAGGCAAAGTGGCAGTCTTGACCAACTACCGC
GAGAATACATCAGAACAAGCTATTGGGGCGAAGAGCCGGGGGGCCATTGT
ATGTAGCTGGCTTGCTGCGCCTTCTGACGAGAAGCGGTCAACCCGGGAAT
ATGTGCAGGATATGGTTGCGAGTCCCACCGCCAGGAATGTCGGTGGGTTC
AGCCTGCTTTGTGGATACATCAACGAGCCCCTGGCAATCGTCTCCAATCG
CTCATCCACCATGGACCAAATTGCATGGGTTGCCACAAAACCTGATCAGA
CTTTGGGTCTCAGTAACACAGTTTTCGAGGATCGGTCATGGCCTAAGATT
CTTGACGGCGAAAGACTGATGAATGAAGCCATTGCTACGCACGTGCAGGC
TGGGGAGGACGAAGATGCTCTTATTACCCGATTCCTTGATATGCTGAGCA
CCAATACACTCCCGAAGCTCTCAGAAGATGCCACTGCGGAGGACTACCTT
CCGTATTTTCGAAAGAGCATCTTCATTCCTATCCTGGGTGCTCGCGAGAA
ACCCGCGAAGCCGGCAGATACAGTAGCTCCTGTGTGCGTTGATGGTAAGC
AGGCAAATGGGGCTGCGGGAGGGGAGCACCATGCAATGGATCTCTCATTC
CTGCATGGTGCATATGGGACTCAACAACAAACGGTAGTACTGGTAAGCGG
CGATGGACGTGTGCGATATTTCGAACGCACATTATATGACAACGATGCAA
ACGCGATCCCGATCGGCCAGGGTGATCGATCATTCGAATTTCACGTCGGT
CAACACTGCAACGAAGCCGACAGAACTTCATGAATGTGTATCGCGCTTCT
ATCCACCGCACATCCTTCCTATCCCTTGATCATCATCAACAACAGGGATG
AATACATACGTCGACCGACATCTCCCGCTGACTGGTGGCCTTCACCAGGG
TCCAATATCTTAGGTGGCCGTGATCTAGCGCGAGAGCCACATGGAACATG
GATGGGAGTGACCAGAGAAGGCAAAGTGGCAGTCTTGACCAACTACCGCG
AGAATACATCAGAACAAGCTATTGGGGCGAAGAGCCGGGGGGCCATTGTA
TGTAGCTGGCTTGCTGCGCCTTCTGACGAGAAGCGGTCAACCCGGGAATA
TGTGCAGGATATGGTTGCGAGTCCCACCGCCAGGAATGTCGGTGGGTTCA
GCCTGCTTTGTGGATACATCAACGAGCCCCTGGCAATCGTCTCCAATCGC
TCATCCACCATGGACCAAATTGCATGGGTTGCCACAAAACCTGATCAGAC
TTTGGGTCTCAGTAACACAGTTTTCGAGGATCGGTCATGGCCTAAGATTC
TTGACGGCGAAAGACTGATGAATGAAGCCATTGCTACGCACGTGCAGGCT
GGGGAGGACGAAGATGCTCTTATTACCCGATTCCTTGATATGCTGAGCAC
CAATACACTCCCGAAGCTCTCAGAAGATGCCACTGCGGAGGACTACCTTC
CGTATTTTCGAAAGAGCATCTTCATTCCTATCCTGGGTGCTCGCGAGAAA
CCCGCGAAGCCGGCAGATACAGTAGCTCCTGTGTGCGTTGATGGTAAGCA
GGCAAATGGGGCTGCGGGAGGGGAGCACCATGCAATGGATCTCTCATTCC
TGCATGGTGCATATGGGACTCAACAACAAACGGTAGTACTGGTAAGCGGC
GATGGACGTGTGCGATATTTCGAACGCACATTATATGACAACGATGCAAA
CGCGATCCCGATCGGCCAGGGTGATCGATCATTCGAATTTCACGTCGGTC
AACACTGCAACGAAGCCGACAGAACTTCATGAATGTGTATCGCGCTTCTA
TCCACCGCACATCCTTCCTATCCCTTGATCATCATCAACAACAGGGAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008551 |
| DBxref | PFAM:PF05742 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1533575..1534631 - |
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